RNA–Protein interactions for RNA: ENST00000492449.5

VPS8-225, Transcript of VPS8, CORVET complex subunit, humanhuman

TSL 1 (best)

Gene VPS8, Length 2,980 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VPS8-225ENST00000492449 C9IYK1 514 aa9.9□□□□□ -0.82
VPS8-225ENST00000492449 ZC3H11AO75152 810 aaKnown RBP eCLIP9.9□□□□□ -0.82
VPS8-225ENST00000492449 TOM1L1O75674 476 aa9.9□□□□□ -0.82
VPS8-225ENST00000492449 IL18RAPO95256 599 aa9.9□□□□□ -0.82
VPS8-225ENST00000492449 MBL2P11226 248 aaPredicted RBP9.9□□□□□ -0.82
VPS8-225ENST00000492449 ITIH1P19827 911 aa9.9□□□□□ -0.82
VPS8-225ENST00000492449 DPP6P42658 865 aa9.9□□□□□ -0.82
VPS8-225ENST00000492449 NAMPTP43490 491 aa9.9□□□□□ -0.82
VPS8-225ENST00000492449 CYP2J2P51589 502 aa9.9□□□□□ -0.82
VPS8-225ENST00000492449 PPP3CAQ08209 521 aa9.9□□□□□ -0.82
VPS8-225ENST00000492449 C1orf220Q5T0J3 134 aa9.9□□□□□ -0.82
VPS8-225ENST00000492449 CYP4A22Q5TCH4 519 aa9.9□□□□□ -0.82
VPS8-225ENST00000492449 ABRAXAS1Q6UWZ7 409 aa9.9□□□□□ -0.82
VPS8-225ENST00000492449 ZBTB49Q6ZSB9 765 aa9.9□□□□□ -0.82
VPS8-225ENST00000492449 KRT28Q7Z3Y7 464 aa9.9□□□□□ -0.82
VPS8-225ENST00000492449 RALGPS2Q86X27 583 aaPredicted RBP9.9□□□□□ -0.82
VPS8-225ENST00000492449 ADGRF2Q8IZF7 708 aa9.9□□□□□ -0.82
VPS8-225ENST00000492449 TRIM63Q969Q1 353 aa9.9□□□□□ -0.82
VPS8-225ENST00000492449 GLT1D1Q96MS3 346 aa9.9□□□□□ -0.82
VPS8-225ENST00000492449 CSF3RQ99062 836 aa9.9□□□□□ -0.82
VPS8-225ENST00000492449 ZNF385DQ9H6B1 395 aa9.9□□□□□ -0.82
VPS8-225ENST00000492449 PNPOQ9NVS9 261 aa9.9□□□□□ -0.82
VPS8-225ENST00000492449 RAB20Q9NX57 234 aa9.9□□□□□ -0.82
VPS8-225ENST00000492449 COPG2Q9UBF2 871 aa9.9□□□□□ -0.82
VPS8-225ENST00000492449 PI4KBQ9UBF8 816 aa9.9□□□□□ -0.82
VPS8-225ENST00000492449 GPSM3Q9Y4H4 160 aa9.9□□□□□ -0.82
VPS8-225ENST00000492449 PCDHAC2Q9Y5I4 1007 aa9.9□□□□□ -0.82
VPS8-225ENST00000492449 PHLPP1O60346 1717 aa9.9□□□□□ -0.82
VPS8-225ENST00000492449 TRBV21OR9-2A0A075B6F4 123 aaPredicted RBP9.9□□□□□ -0.83
VPS8-225ENST00000492449 hCG_1818297A0A087WSY0 165 aa9.9□□□□□ -0.83
VPS8-225ENST00000492449 AIM2O14862 343 aa9.9□□□□□ -0.83
VPS8-225ENST00000492449 CDH1P12830 882 aa9.9□□□□□ -0.83
VPS8-225ENST00000492449 VAMP7P51809 220 aa9.9□□□□□ -0.83
VPS8-225ENST00000492449 TNK2Q07912 1038 aa9.9□□□□□ -0.83
VPS8-225ENST00000492449 MERTKQ12866 999 aa9.9□□□□□ -0.83
VPS8-225ENST00000492449 TRIM32Q13049 653 aa9.9□□□□□ -0.83
VPS8-225ENST00000492449 DNASE1L3Q13609 305 aa9.9□□□□□ -0.83
VPS8-225ENST00000492449 DUSP7Q16829 419 aa9.9□□□□□ -0.83
VPS8-225ENST00000492449 CEP55Q53EZ4 464 aa9.9□□□□□ -0.83
VPS8-225ENST00000492449 ZNF773Q6PK81 442 aa9.9□□□□□ -0.83
VPS8-225ENST00000492449 SPOCD1Q6ZMY3 1216 aa9.9□□□□□ -0.83
VPS8-225ENST00000492449 CHSY3Q70JA7 882 aa9.9□□□□□ -0.83
VPS8-225ENST00000492449 MON1BQ7L1V2 547 aa9.9□□□□□ -0.83
VPS8-225ENST00000492449 ZNF720Q7Z2F6 126 aa9.9□□□□□ -0.83
VPS8-225ENST00000492449 ZNF677Q86XU0 584 aa9.9□□□□□ -0.83
VPS8-225ENST00000492449 TMC2Q8TDI7 906 aa9.9□□□□□ -0.83
VPS8-225ENST00000492449 MMP19Q99542 508 aa9.9□□□□□ -0.83
VPS8-225ENST00000492449 ADI1Q9BV57 179 aa9.9□□□□□ -0.83
VPS8-225ENST00000492449 STRA6Q9BX79 667 aa9.9□□□□□ -0.83
VPS8-225ENST00000492449 SEMA6AQ9H2E6 1030 aa9.9□□□□□ -0.83
VPS8-225ENST00000492449 IKZF4Q9H2S9 585 aa9.9□□□□□ -0.83
VPS8-225ENST00000492449 RPAP3Q9H6T3 665 aaPredicted RBP9.9□□□□□ -0.83
VPS8-225ENST00000492449 WDR41Q9HAD4 459 aa9.9□□□□□ -0.83
VPS8-225ENST00000492449 FANCEQ9HB96 536 aa9.9□□□□□ -0.83
VPS8-225ENST00000492449 NPAP1Q9NZP6 1156 aa9.9□□□□□ -0.83
VPS8-225ENST00000492449 MOSPD1Q9UJG1 213 aa9.9□□□□□ -0.83
VPS8-225ENST00000492449 PACSIN3Q9UKS6 424 aa9.9□□□□□ -0.83
VPS8-225ENST00000492449 SNED1Q8TER0 1413 aa9.89□□□□□ -0.83
VPS8-225ENST00000492449 SLIT2O94813 1529 aa9.89□□□□□ -0.83
VPS8-225ENST00000492449 TCRBV7S3A2A0A539 114 aa9.89□□□□□ -0.83
VPS8-225ENST00000492449 UNCXA6NJT0 531 aa9.89□□□□□ -0.83
VPS8-225ENST00000492449 SOCS2O14508 198 aa9.89□□□□□ -0.83
VPS8-225ENST00000492449 TBX3O15119 743 aa9.89□□□□□ -0.83
VPS8-225ENST00000492449 DEAF1O75398 565 aaPredicted RBP9.89□□□□□ -0.83
VPS8-225ENST00000492449 RFPL2O75678 378 aa9.89□□□□□ -0.83
VPS8-225ENST00000492449 GNAO1P09471 354 aa9.89□□□□□ -0.83
VPS8-225ENST00000492449 KRT10P13645 584 aa9.89□□□□□ -0.83
VPS8-225ENST00000492449 GARTP22102 1010 aa9.89□□□□□ -0.83
VPS8-225ENST00000492449 EEF1DP29692 281 aaKnown RBP9.89□□□□□ -0.83
VPS8-225ENST00000492449 RPL22P35268 128 aaKnown RBP9.89□□□□□ -0.83
VPS8-225ENST00000492449 CASP3P42574 277 aa9.89□□□□□ -0.83
VPS8-225ENST00000492449 NIPAL4Q0D2K0 466 aa9.89□□□□□ -0.83
VPS8-225ENST00000492449 ATG14Q6ZNE5 492 aa9.89□□□□□ -0.83
VPS8-225ENST00000492449 OSTM1Q86WC4 334 aa9.89□□□□□ -0.83
VPS8-225ENST00000492449 NDUFAF2Q8N183 169 aa9.89□□□□□ -0.83
VPS8-225ENST00000492449 FLAD1Q8NFF5 587 aa9.89□□□□□ -0.83
VPS8-225ENST00000492449 VPS33AQ96AX1 596 aa9.89□□□□□ -0.83
VPS8-225ENST00000492449 MAGED4Q96JG8 741 aa9.89□□□□□ -0.83
VPS8-225ENST00000492449 EYA3Q99504 573 aa9.89□□□□□ -0.83
VPS8-225ENST00000492449 CIB1Q99828 191 aa9.89□□□□□ -0.83
VPS8-225ENST00000492449 BCL7BQ9BQE9 202 aa9.89□□□□□ -0.83
VPS8-225ENST00000492449 TRPV6Q9H1D0 765 aa9.89□□□□□ -0.83
VPS8-225ENST00000492449 EMCNQ9ULC0 261 aa9.89□□□□□ -0.83
VPS8-225ENST00000492449 ZBTB21Q9ULJ3 1066 aa9.89□□□□□ -0.83
VPS8-225ENST00000492449 ARIH1Q9Y4X5 557 aaPredicted RBP9.89□□□□□ -0.83
VPS8-225ENST00000492449 DOT1LQ8TEK3 1739 aa9.89□□□□□ -0.83
VPS8-225ENST00000492449 POLR1CO15160 346 aaPredicted RBP9.89□□□□□ -0.83
VPS8-225ENST00000492449 PAPSS1O43252 624 aaPredicted RBP9.89□□□□□ -0.83
VPS8-225ENST00000492449 CNTFP26441 200 aa9.89□□□□□ -0.83
VPS8-225ENST00000492449 SERPINB9P50453 376 aa9.89□□□□□ -0.83
VPS8-225ENST00000492449 NKX2-5P52952 324 aaPredicted RBP9.89□□□□□ -0.83
VPS8-225ENST00000492449 PRKAA2P54646 552 aa9.89□□□□□ -0.83
VPS8-225ENST00000492449 ABCE1P61221 599 aaKnown RBP9.89□□□□□ -0.83
VPS8-225ENST00000492449 BST2Q10589 180 aaKnown RBP9.89□□□□□ -0.83
VPS8-225ENST00000492449 TRIM25Q14258 630 aaKnown RBP9.89□□□□□ -0.83
VPS8-225ENST00000492449 CBX2Q14781 532 aaPredicted RBP9.89□□□□□ -0.83
VPS8-225ENST00000492449 CDK10Q15131 360 aa9.89□□□□□ -0.83
VPS8-225ENST00000492449 TFDP3Q5H9I0 405 aa9.89□□□□□ -0.83
VPS8-225ENST00000492449 RINT1Q6NUQ1 792 aa9.89□□□□□ -0.83
VPS8-225ENST00000492449 TUBA3EQ6PEY2 450 aa9.89□□□□□ -0.83
Retrieved 100 of 20,778 RNA–protein pairs in 25.4 ms