RNA–Protein interactions for RNA: ENST00000492280.5

HMGN1-220, Transcript of high mobility group nucleosome binding domain 1, humanhuman

TSL 5

Gene HMGN1, Length 2,707 nt, Biotype retained intron, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMGN1-220ENST00000492280 MTO1Q9Y2Z2 717 aaKnown RBP12.74□□□□□ -0.37
HMGN1-220ENST00000492280 HACD1B0YJ81 288 aa12.74□□□□□ -0.37
HMGN1-220ENST00000492280 ZNF487B1APH4 448 aa12.74□□□□□ -0.37
HMGN1-220ENST00000492280 B2RBV5 119 aa12.74□□□□□ -0.37
HMGN1-220ENST00000492280 GSC2O15499 205 aa12.74□□□□□ -0.37
HMGN1-220ENST00000492280 PLIN3O60664 434 aa12.74□□□□□ -0.37
HMGN1-220ENST00000492280 ZMPSTE24O75844 475 aa12.74□□□□□ -0.37
HMGN1-220ENST00000492280 SORBS2O94875 1100 aaKnown RBP12.74□□□□□ -0.37
HMGN1-220ENST00000492280 TPBGLP0DKB5 382 aa12.74□□□□□ -0.37
HMGN1-220ENST00000492280 NMBRP28336 390 aa12.74□□□□□ -0.37
HMGN1-220ENST00000492280 ELF1P32519 619 aa12.74□□□□□ -0.37
HMGN1-220ENST00000492280 SCNN1AP37088 669 aa12.74□□□□□ -0.37
HMGN1-220ENST00000492280 GLRBP48167 497 aa12.74□□□□□ -0.37
HMGN1-220ENST00000492280 CLNS1AP54105 237 aaKnown RBP12.74□□□□□ -0.37
HMGN1-220ENST00000492280 CAP1Q01518 475 aa12.74□□□□□ -0.37
HMGN1-220ENST00000492280 USP4Q13107 963 aa12.74□□□□□ -0.37
HMGN1-220ENST00000492280 SEMA3BQ13214 749 aa12.74□□□□□ -0.37
HMGN1-220ENST00000492280 CRHR2Q13324 411 aa12.74□□□□□ -0.37
HMGN1-220ENST00000492280 NAA25Q14CX7 972 aa12.74□□□□□ -0.37
HMGN1-220ENST00000492280 PAFAH1B3Q15102 231 aaKnown RBP12.74□□□□□ -0.37
HMGN1-220ENST00000492280 PARP6Q2NL67 630 aa12.74□□□□□ -0.37
HMGN1-220ENST00000492280 ACSBG2Q5FVE4 666 aa12.74□□□□□ -0.37
HMGN1-220ENST00000492280 MBLAC2Q68D91 279 aa12.74□□□□□ -0.37
HMGN1-220ENST00000492280 TLDC1Q6P9B6 456 aa12.74□□□□□ -0.37
HMGN1-220ENST00000492280 MAVSQ7Z434 540 aa12.74□□□□□ -0.37
HMGN1-220ENST00000492280 RASAL3Q86YV0 1011 aa12.74□□□□□ -0.37
HMGN1-220ENST00000492280 KCTD13Q8WZ19 329 aa12.74□□□□□ -0.37
HMGN1-220ENST00000492280 TRIB2Q92519 343 aa12.74□□□□□ -0.37
HMGN1-220ENST00000492280 CDKL2Q92772 493 aa12.74□□□□□ -0.37
HMGN1-220ENST00000492280 BTBD10Q9BSF8 475 aa12.74□□□□□ -0.37
HMGN1-220ENST00000492280 IARS2Q9NSE4 1012 aaKnown RBP12.74□□□□□ -0.37
HMGN1-220ENST00000492280 TRPV2Q9Y5S1 764 aa12.74□□□□□ -0.37
HMGN1-220ENST00000492280 ARHGAP42A6NI28 874 aa12.73□□□□□ -0.37
HMGN1-220ENST00000492280 PHGDHO43175 533 aaKnown RBP12.73□□□□□ -0.37
HMGN1-220ENST00000492280 ATP5HO75947 161 aa12.73□□□□□ -0.37
HMGN1-220ENST00000492280 ATG16L1Q676U5 607 aa12.73□□□□□ -0.37
HMGN1-220ENST00000492280 C4orf50Q6ZRC1 276 aa12.73□□□□□ -0.37
HMGN1-220ENST00000492280 RBM15BQ8NDT2 890 aaKnown RBP12.73□□□□□ -0.37
HMGN1-220ENST00000492280 DQX1Q8TE96 717 aaKnown RBP12.73□□□□□ -0.37
HMGN1-220ENST00000492280 FAM161BQ96MY7 647 aa12.73□□□□□ -0.37
HMGN1-220ENST00000492280 FBXW11Q9UKB1 542 aa12.73□□□□□ -0.37
HMGN1-220ENST00000492280 PADI3Q9ULW8 664 aa12.73□□□□□ -0.37
HMGN1-220ENST00000492280 UNCXA6NJT0 531 aa12.73□□□□□ -0.37
HMGN1-220ENST00000492280 SNNO75324 88 aaPredicted RBP12.73□□□□□ -0.37
HMGN1-220ENST00000492280 SKAP2O75563 359 aaPredicted RBP12.73□□□□□ -0.37
HMGN1-220ENST00000492280 ALDH1A2O94788 518 aa12.73□□□□□ -0.37
HMGN1-220ENST00000492280 POLBP06746 335 aa12.73□□□□□ -0.37
HMGN1-220ENST00000492280 RGS2P41220 211 aa12.73□□□□□ -0.37
HMGN1-220ENST00000492280 GPR15P49685 360 aa12.73□□□□□ -0.37
HMGN1-220ENST00000492280 POU6F1Q14863 301 aa12.73□□□□□ -0.37
HMGN1-220ENST00000492280 UPP1Q16831 310 aa12.73□□□□□ -0.37
HMGN1-220ENST00000492280 TEDDM1Q5T9Z0 273 aa12.73□□□□□ -0.37
HMGN1-220ENST00000492280 FSTL4Q6MZW2 842 aa12.73□□□□□ -0.37
HMGN1-220ENST00000492280 CNTD1Q8N815 330 aa12.73□□□□□ -0.37
HMGN1-220ENST00000492280 ZNF398Q8TD17 642 aa12.73□□□□□ -0.37
HMGN1-220ENST00000492280 MTBPQ96DY7 904 aa12.73□□□□□ -0.37
HMGN1-220ENST00000492280 C7orf26Q96N11 449 aa12.73□□□□□ -0.37
HMGN1-220ENST00000492280 APBA2Q99767 749 aa12.73□□□□□ -0.37
HMGN1-220ENST00000492280 KATNAL1Q9BW62 490 aa12.73□□□□□ -0.37
HMGN1-220ENST00000492280 SENP6Q9GZR1 1112 aaPredicted RBP12.73□□□□□ -0.37
HMGN1-220ENST00000492280 TRMT13Q9NUP7 481 aaKnown RBP12.73□□□□□ -0.37
HMGN1-220ENST00000492280 MPP6Q9NZW5 540 aa12.73□□□□□ -0.37
HMGN1-220ENST00000492280 G3BP2Q9UN86 482 aaKnown RBP12.73□□□□□ -0.37
HMGN1-220ENST00000492280 CDH23Q9H251 3354 aa12.72□□□□□ -0.37
HMGN1-220ENST00000492280 ZCWPW2A0A1B0GU75 182 aa12.72□□□□□ -0.37
HMGN1-220ENST00000492280 TTC24A2A3L6 582 aaPredicted RBP12.72□□□□□ -0.37
HMGN1-220ENST00000492280 CCDC22O60826 627 aa12.72□□□□□ -0.37
HMGN1-220ENST00000492280 AKR1A1P14550 325 aa12.72□□□□□ -0.37
HMGN1-220ENST00000492280 GARSP41250 739 aaKnown RBP12.72□□□□□ -0.37
HMGN1-220ENST00000492280 MXRA7P84157 204 aa12.72□□□□□ -0.37
HMGN1-220ENST00000492280 RCN1Q15293 331 aa12.72□□□□□ -0.37
HMGN1-220ENST00000492280 NAPRTQ6XQN6 538 aa12.72□□□□□ -0.37
HMGN1-220ENST00000492280 TEX9Q8N6V9 391 aa12.72□□□□□ -0.37
HMGN1-220ENST00000492280 IPMKQ8NFU5 416 aa12.72□□□□□ -0.37
HMGN1-220ENST00000492280 SMARCD1Q96GM5 515 aa12.72□□□□□ -0.37
HMGN1-220ENST00000492280 C20orf96Q9NUD7 363 aaPredicted RBP12.72□□□□□ -0.37
HMGN1-220ENST00000492280 RCOR3Q9P2K3 495 aaPredicted RBP12.72□□□□□ -0.37
HMGN1-220ENST00000492280 PACSIN3Q9UKS6 424 aa12.72□□□□□ -0.37
HMGN1-220ENST00000492280 WASF2Q9Y6W5 498 aa12.72□□□□□ -0.37
HMGN1-220ENST00000492280 TK2O00142 265 aa12.72□□□□□ -0.37
HMGN1-220ENST00000492280 TGDSO95455 350 aa12.72□□□□□ -0.37
HMGN1-220ENST00000492280 AP2A1O95782 977 aa12.72□□□□□ -0.37
HMGN1-220ENST00000492280 SLC1A6P48664 564 aa12.72□□□□□ -0.37
HMGN1-220ENST00000492280 SERPINB9P50453 376 aa12.72□□□□□ -0.37
HMGN1-220ENST00000492280 RASSF2P50749 326 aa12.72□□□□□ -0.37
HMGN1-220ENST00000492280 ITGA7Q13683 1181 aa12.72□□□□□ -0.37
HMGN1-220ENST00000492280 PCBP1Q15365 356 aaKnown RBP eCLIP12.72□□□□□ -0.37
HMGN1-220ENST00000492280 ZNF280DQ6N043 979 aa12.72□□□□□ -0.37
HMGN1-220ENST00000492280 C17orf99Q6UX52 265 aa12.72□□□□□ -0.37
HMGN1-220ENST00000492280 BZW1Q7L1Q6 419 aaKnown RBP12.72□□□□□ -0.37
HMGN1-220ENST00000492280 PSTKQ8IV42 348 aaKnown RBP12.72□□□□□ -0.37
HMGN1-220ENST00000492280 SCN4BQ8IWT1 228 aa12.72□□□□□ -0.37
HMGN1-220ENST00000492280 B3GALT6Q96L58 329 aa12.72□□□□□ -0.37
HMGN1-220ENST00000492280 CNGB3Q9NQW8 809 aa12.72□□□□□ -0.37
HMGN1-220ENST00000492280 SAR1AQ9NR31 198 aa12.72□□□□□ -0.37
HMGN1-220ENST00000492280 SDAD1Q9NVU7 687 aaKnown RBP eCLIP12.72□□□□□ -0.37
HMGN1-220ENST00000492280 LNPEPQ9UIQ6 1025 aa12.72□□□□□ -0.37
HMGN1-220ENST00000492280 KLF11O14901 512 aa12.71□□□□□ -0.37
HMGN1-220ENST00000492280 SOAT2O75908 522 aa12.71□□□□□ -0.37
HMGN1-220ENST00000492280 GNAT1P11488 350 aa12.71□□□□□ -0.37
Retrieved 100 of 20,778 RNA–protein pairs in 15.7 ms