RNA–Protein interactions for RNA: ENST00000491334.1

CDK5RAP2-218, Transcript of CDK5 regulatory subunit associated protein 2, human

TSL 2

Gene CDK5RAP2, Length 546 nt, Biotype retained intron.

RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
CDK5RAP2-218	ENST00000491334	SIX6OS1	Q8N1H7	587 aa		19.92	■□□□□ 0.78
CDK5RAP2-218	ENST00000491334	GRAMD1A	Q96CP6	724 aa		19.92	■□□□□ 0.78
CDK5RAP2-218	ENST00000491334	KLHL11	Q9NVR0	708 aa		19.92	■□□□□ 0.78
CDK5RAP2-218	ENST00000491334	HESX1	Q9UBX0	185 aa		19.92	■□□□□ 0.78
CDK5RAP2-218	ENST00000491334		A0A1B0GVM2	712 aa		19.91	■□□□□ 0.78
CDK5RAP2-218	ENST00000491334	TULP2	O00295	520 aa		19.91	■□□□□ 0.78
CDK5RAP2-218	ENST00000491334	CALU	O43852	315 aa	Predicted RBP	19.91	■□□□□ 0.78
CDK5RAP2-218	ENST00000491334	RNGTT	O60942	597 aa	Known RBP	19.91	■□□□□ 0.78
CDK5RAP2-218	ENST00000491334	IGLV3-27	P01718	113 aa		19.91	■□□□□ 0.78
CDK5RAP2-218	ENST00000491334	KRT13	P13646	458 aa		19.91	■□□□□ 0.78
CDK5RAP2-218	ENST00000491334	DRD3	P35462	400 aa		19.91	■□□□□ 0.78
CDK5RAP2-218	ENST00000491334	CTSO	P43234	321 aa	Predicted RBP	19.91	■□□□□ 0.78
CDK5RAP2-218	ENST00000491334	RPS24	P62847	133 aa	Known RBP	19.91	■□□□□ 0.78
CDK5RAP2-218	ENST00000491334	KIAA1614	Q5VZ46	1190 aa		19.91	■□□□□ 0.78
CDK5RAP2-218	ENST00000491334	MSANTD2	Q6P1R3	559 aa		19.91	■□□□□ 0.78
CDK5RAP2-218	ENST00000491334	CCDC81	Q6ZN84	652 aa		19.91	■□□□□ 0.78
CDK5RAP2-218	ENST00000491334	TRIM69	Q86WT6	500 aa		19.91	■□□□□ 0.78
CDK5RAP2-218	ENST00000491334	SCML4	Q8N228	414 aa		19.91	■□□□□ 0.78
CDK5RAP2-218	ENST00000491334	SLC46A1	Q96NT5	459 aa		19.91	■□□□□ 0.78
CDK5RAP2-218	ENST00000491334	USP29	Q9HBJ7	922 aa		19.91	■□□□□ 0.78
CDK5RAP2-218	ENST00000491334	CNGB3	Q9NQW8	809 aa		19.91	■□□□□ 0.78
CDK5RAP2-218	ENST00000491334	EXOC1	Q9NV70	894 aa		19.91	■□□□□ 0.78
CDK5RAP2-218	ENST00000491334	UCKL1	Q9NWZ5	548 aa		19.91	■□□□□ 0.78
CDK5RAP2-218	ENST00000491334	NEMP2	A6NFY4	417 aa		19.9	■□□□□ 0.78
CDK5RAP2-218	ENST00000491334	FFAR2	O15552	330 aa		19.9	■□□□□ 0.78
CDK5RAP2-218	ENST00000491334	PLRG1	O43660	514 aa	Known RBP	19.9	■□□□□ 0.78
CDK5RAP2-218	ENST00000491334	RTN2	O75298	545 aa		19.9	■□□□□ 0.78
CDK5RAP2-218	ENST00000491334	TRIM49	P0CI25	452 aa		19.9	■□□□□ 0.78
CDK5RAP2-218	ENST00000491334	TRIM49C	P0CI26	452 aa		19.9	■□□□□ 0.78
CDK5RAP2-218	ENST00000491334	TBX4	P57082	545 aa		19.9	■□□□□ 0.78
CDK5RAP2-218	ENST00000491334	ENPEP	Q07075	957 aa		19.9	■□□□□ 0.78
CDK5RAP2-218	ENST00000491334	BST2	Q10589	180 aa	Known RBP	19.9	■□□□□ 0.78
CDK5RAP2-218	ENST00000491334	KCNMA1	Q12791	1236 aa		19.9	■□□□□ 0.78
CDK5RAP2-218	ENST00000491334	GOLGA7B	Q2TAP0	167 aa		19.9	■□□□□ 0.78
CDK5RAP2-218	ENST00000491334	FSCB	Q5H9T9	825 aa		19.9	■□□□□ 0.78
CDK5RAP2-218	ENST00000491334	FAM46C	Q5VWP2	391 aa		19.9	■□□□□ 0.78
CDK5RAP2-218	ENST00000491334	MMS22L	Q6ZRQ5	1243 aa		19.9	■□□□□ 0.78
CDK5RAP2-218	ENST00000491334	DSG4	Q86SJ6	1040 aa		19.9	■□□□□ 0.78
CDK5RAP2-218	ENST00000491334	KIAA0895	Q8NCT3	520 aa		19.9	■□□□□ 0.78
CDK5RAP2-218	ENST00000491334	KCTD13	Q8WZ19	329 aa		19.9	■□□□□ 0.78
CDK5RAP2-218	ENST00000491334	TATDN2	Q93075	761 aa		19.9	■□□□□ 0.78
CDK5RAP2-218	ENST00000491334	FAM131C	Q96AQ9	280 aa		19.9	■□□□□ 0.78
CDK5RAP2-218	ENST00000491334	RPL10L	Q96L21	214 aa	Known RBP	19.9	■□□□□ 0.78
CDK5RAP2-218	ENST00000491334	SPAG5	Q96R06	1193 aa		19.9	■□□□□ 0.78
CDK5RAP2-218	ENST00000491334	MMRN2	Q9H8L6	949 aa		19.9	■□□□□ 0.78
CDK5RAP2-218	ENST00000491334	TMEM8A	Q9HCN3	771 aa		19.9	■□□□□ 0.78
CDK5RAP2-218	ENST00000491334	TSPAN16	Q9UKR8	245 aa		19.9	■□□□□ 0.78
CDK5RAP2-218	ENST00000491334	THEGL	P0DJG4	465 aa		19.89	■□□□□ 0.77
CDK5RAP2-218	ENST00000491334	NFATC3	Q12968	1075 aa		19.89	■□□□□ 0.77
CDK5RAP2-218	ENST00000491334	ISX	Q2M1V0	245 aa		19.89	■□□□□ 0.77
CDK5RAP2-218	ENST00000491334	NADSYN1	Q6IA69	706 aa		19.89	■□□□□ 0.77
CDK5RAP2-218	ENST00000491334	XKR5	Q6UX68	686 aa		19.89	■□□□□ 0.77
CDK5RAP2-218	ENST00000491334	MAPK15	Q8TD08	544 aa		19.89	■□□□□ 0.77
CDK5RAP2-218	ENST00000491334	APOLD1	Q96LR9	279 aa		19.89	■□□□□ 0.77
CDK5RAP2-218	ENST00000491334	ZNF396	Q96N95	335 aa	Predicted RBP	19.89	■□□□□ 0.77
CDK5RAP2-218	ENST00000491334	HNRNPUL1	Q9BUJ2	856 aa	Known RBP eCLIP	19.89	■□□□□ 0.77
CDK5RAP2-218	ENST00000491334	NLGN3	Q9NZ94	848 aa		19.89	■□□□□ 0.77
CDK5RAP2-218	ENST00000491334	SATB2	Q9UPW6	733 aa		19.89	■□□□□ 0.77
CDK5RAP2-218	ENST00000491334	MTMR6	Q9Y217	621 aa		19.89	■□□□□ 0.77
CDK5RAP2-218	ENST00000491334	COL12A1	Q99715	3063 aa		19.89	■□□□□ 0.77
CDK5RAP2-218	ENST00000491334	LUC7L3	O95232	432 aa	Known RBP	19.88	■□□□□ 0.77
CDK5RAP2-218	ENST00000491334	KRT10	P13645	584 aa		19.88	■□□□□ 0.77
CDK5RAP2-218	ENST00000491334	LCP1	P13796	627 aa		19.88	■□□□□ 0.77
CDK5RAP2-218	ENST00000491334	GTF2H1	P32780	548 aa		19.88	■□□□□ 0.77
CDK5RAP2-218	ENST00000491334	DAOA	P59103	153 aa		19.88	■□□□□ 0.77
CDK5RAP2-218	ENST00000491334	POM121L1P	Q3SYA9	428 aa		19.88	■□□□□ 0.77
CDK5RAP2-218	ENST00000491334	MS4A13	Q5J8X5	152 aa		19.88	■□□□□ 0.77
CDK5RAP2-218	ENST00000491334	C3orf38	Q5JPI3	329 aa		19.88	■□□□□ 0.77
CDK5RAP2-218	ENST00000491334	KRT39	Q6A163	491 aa		19.88	■□□□□ 0.77
CDK5RAP2-218	ENST00000491334	CEP57L1	Q8IYX8	460 aa		19.88	■□□□□ 0.77
CDK5RAP2-218	ENST00000491334	UBA3	Q8TBC4	463 aa		19.88	■□□□□ 0.77
CDK5RAP2-218	ENST00000491334	PRICKLE1	Q96MT3	831 aa	Predicted RBP	19.88	■□□□□ 0.77
CDK5RAP2-218	ENST00000491334	DUSP23	Q9BVJ7	150 aa		19.88	■□□□□ 0.77
CDK5RAP2-218	ENST00000491334	UPF2	Q9HAU5	1272 aa	Known RBP	19.88	■□□□□ 0.77
CDK5RAP2-218	ENST00000491334	FAM13B	Q9NYF5	915 aa		19.88	■□□□□ 0.77
CDK5RAP2-218	ENST00000491334	TRAF3IP3	Q9Y228	551 aa		19.88	■□□□□ 0.77
CDK5RAP2-218	ENST00000491334	KLRC4	O43908	158 aa		19.87	■□□□□ 0.77
CDK5RAP2-218	ENST00000491334	PIAS2	O75928	621 aa		19.87	■□□□□ 0.77
CDK5RAP2-218	ENST00000491334	SKOR1	P84550	965 aa		19.87	■□□□□ 0.77
CDK5RAP2-218	ENST00000491334	SULT2A1	Q06520	285 aa		19.87	■□□□□ 0.77
CDK5RAP2-218	ENST00000491334	FAM186B	Q8IYM0	893 aa		19.87	■□□□□ 0.77
CDK5RAP2-218	ENST00000491334	APCDD1	Q8J025	514 aa		19.87	■□□□□ 0.77
CDK5RAP2-218	ENST00000491334	CFAP52	Q8N1V2	620 aa		19.87	■□□□□ 0.77
CDK5RAP2-218	ENST00000491334	OR8D1	Q8WZ84	308 aa		19.87	■□□□□ 0.77
CDK5RAP2-218	ENST00000491334	IRGQ	Q8WZA9	623 aa		19.87	■□□□□ 0.77
CDK5RAP2-218	ENST00000491334	RAB20	Q9NX57	234 aa		19.87	■□□□□ 0.77
CDK5RAP2-218	ENST00000491334	CA5B	Q9Y2D0	317 aa		19.87	■□□□□ 0.77
CDK5RAP2-218	ENST00000491334	PCDHGA8	Q9Y5G5	932 aa		19.87	■□□□□ 0.77
CDK5RAP2-218	ENST00000491334	UBR5	O95071	2799 aa	Predicted RBP	19.87	■□□□□ 0.77
CDK5RAP2-218	ENST00000491334	SCAMP1	O15126	338 aa		19.86	■□□□□ 0.77
CDK5RAP2-218	ENST00000491334	SLC31A1	O15431	190 aa		19.86	■□□□□ 0.77
CDK5RAP2-218	ENST00000491334	LZTS3	O60299	673 aa	Predicted RBP	19.86	■□□□□ 0.77
CDK5RAP2-218	ENST00000491334	YEATS4	O95619	227 aa		19.86	■□□□□ 0.77
CDK5RAP2-218	ENST00000491334	NTRK1	P04629	796 aa		19.86	■□□□□ 0.77
CDK5RAP2-218	ENST00000491334	GIMD1	P0DJR0	217 aa		19.86	■□□□□ 0.77
CDK5RAP2-218	ENST00000491334	SETSIP	P0DME0	302 aa		19.86	■□□□□ 0.77
CDK5RAP2-218	ENST00000491334	NR2F2	P24468	414 aa		19.86	■□□□□ 0.77
CDK5RAP2-218	ENST00000491334	PSMC2	P35998	433 aa	Known RBP	19.86	■□□□□ 0.77
CDK5RAP2-218	ENST00000491334	NUCB2	P80303	420 aa		19.86	■□□□□ 0.77
CDK5RAP2-218	ENST00000491334	SLC12A1	Q13621	1099 aa		19.86	■□□□□ 0.77

Retrieved 100 of 20,778 RNA–protein pairs in 32.7 ms