RNA–Protein interactions for RNA: ENST00000491165.5

USF3-203, Transcript of upstream transcription factor family member 3, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene USF3, Length 2,133 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USF3-203ENST00000491165 NCAM1P13591 858 aa23.39■■□□□ 1.33
USF3-203ENST00000491165 CCND1P24385 295 aa23.39■■□□□ 1.33
USF3-203ENST00000491165 ATP11AP98196 1134 aa23.39■■□□□ 1.33
USF3-203ENST00000491165 VEPH1Q14D04 833 aa23.39■■□□□ 1.33
USF3-203ENST00000491165 HIF1AQ16665 826 aa23.39■■□□□ 1.33
USF3-203ENST00000491165 CDO1Q16878 200 aa23.39■■□□□ 1.33
USF3-203ENST00000491165 MON1AQ86VX9 555 aa23.39■■□□□ 1.33
USF3-203ENST00000491165 ADAM32Q8TC27 787 aa23.39■■□□□ 1.33
USF3-203ENST00000491165 LRRC8CQ8TDW0 803 aa23.39■■□□□ 1.33
USF3-203ENST00000491165 TRMT2BQ96GJ1 504 aaKnown RBP23.39■■□□□ 1.33
USF3-203ENST00000491165 MYLK2Q9H1R3 596 aa23.39■■□□□ 1.33
USF3-203ENST00000491165 ASNSD1Q9NWL6 643 aa23.39■■□□□ 1.33
USF3-203ENST00000491165 CDH22Q9UJ99 828 aa23.39■■□□□ 1.33
USF3-203ENST00000491165 DAB1O75553 588 aa23.38■■□□□ 1.33
USF3-203ENST00000491165 ATP5HO75947 161 aa23.38■■□□□ 1.33
USF3-203ENST00000491165 GPD1P21695 349 aa23.38■■□□□ 1.33
USF3-203ENST00000491165 MATKP42679 507 aa23.38■■□□□ 1.33
USF3-203ENST00000491165 ARCQ7LC44 396 aa23.38■■□□□ 1.33
USF3-203ENST00000491165 SPOCK2Q92563 424 aa23.38■■□□□ 1.33
USF3-203ENST00000491165 ZNF707Q96C28 371 aaPredicted RBP23.38■■□□□ 1.33
USF3-203ENST00000491165 RAB3IPQ96QF0 476 aaPredicted RBP23.38■■□□□ 1.33
USF3-203ENST00000491165 ETNK1Q9HBU6 452 aa23.38■■□□□ 1.33
USF3-203ENST00000491165 NOP53Q9NZM5 478 aaKnown RBP23.38■■□□□ 1.33
USF3-203ENST00000491165 FARP1Q9Y4F1 1045 aaPredicted RBP23.38■■□□□ 1.33
USF3-203ENST00000491165 EDF1O60869 148 aaKnown RBP23.38■■□□□ 1.33
USF3-203ENST00000491165 ANP32DO95626 131 aa23.38■■□□□ 1.33
USF3-203ENST00000491165 TBX18O95935 607 aa23.38■■□□□ 1.33
USF3-203ENST00000491165 GBP2P32456 591 aaPredicted RBP23.38■■□□□ 1.33
USF3-203ENST00000491165 CCR2P41597 374 aa23.38■■□□□ 1.33
USF3-203ENST00000491165 ZNF143P52747 638 aaPredicted RBP23.38■■□□□ 1.33
USF3-203ENST00000491165 GEMIN4P57678 1058 aaKnown RBP23.38■■□□□ 1.33
USF3-203ENST00000491165 EFHC2Q5JST6 749 aa23.38■■□□□ 1.33
USF3-203ENST00000491165 GAREM2Q75VX8 874 aa23.38■■□□□ 1.33
USF3-203ENST00000491165 FNIP1Q8TF40 1166 aa23.38■■□□□ 1.33
USF3-203ENST00000491165 PHACTR1Q9C0D0 580 aa23.38■■□□□ 1.33
USF3-203ENST00000491165 FASTKD2Q9NYY8 710 aaKnown RBP eCLIP23.38■■□□□ 1.33
USF3-203ENST00000491165 GRID1Q9ULK0 1009 aa23.38■■□□□ 1.33
USF3-203ENST00000491165 EFR3BQ9Y2G0 817 aa23.38■■□□□ 1.33
USF3-203ENST00000491165 CCDC195A0A1B0GUA6 201 aa23.37■■□□□ 1.33
USF3-203ENST00000491165 C3orf70A6NLC5 250 aaPredicted RBP23.37■■□□□ 1.33
USF3-203ENST00000491165 A8MUI8 341 aa23.37■■□□□ 1.33
USF3-203ENST00000491165 TYROBPO43914 113 aa23.37■■□□□ 1.33
USF3-203ENST00000491165 PSMA2P25787 234 aa23.37■■□□□ 1.33
USF3-203ENST00000491165 PHBP35232 272 aa23.37■■□□□ 1.33
USF3-203ENST00000491165 TAF12Q16514 161 aa23.37■■□□□ 1.33
USF3-203ENST00000491165 HHATQ5VTY9 493 aa23.37■■□□□ 1.33
USF3-203ENST00000491165 Q7L0L9 218 aa23.37■■□□□ 1.33
USF3-203ENST00000491165 ANKMY2Q8IV38 441 aa23.37■■□□□ 1.33
USF3-203ENST00000491165 PPIL6Q8IXY8 311 aa23.37■■□□□ 1.33
USF3-203ENST00000491165 NT5C3BQ969T7 300 aa23.37■■□□□ 1.33
USF3-203ENST00000491165 MRRFQ96E11 262 aaKnown RBP23.37■■□□□ 1.33
USF3-203ENST00000491165 LRRC37BQ96QE4 947 aa23.37■■□□□ 1.33
USF3-203ENST00000491165 TBCBQ99426 244 aa23.37■■□□□ 1.33
USF3-203ENST00000491165 FRMD8P1Q9BZ68 369 aaPredicted RBP23.37■■□□□ 1.33
USF3-203ENST00000491165 CCSER2Q9H7U1 834 aa23.37■■□□□ 1.33
USF3-203ENST00000491165 SLCO1B3Q9NPD5 702 aa23.37■■□□□ 1.33
USF3-203ENST00000491165 COMMD8Q9NX08 183 aa23.37■■□□□ 1.33
USF3-203ENST00000491165 DNMT3BQ9UBC3 853 aaKnown RBP23.37■■□□□ 1.33
USF3-203ENST00000491165 FETUBQ9UGM5 382 aa23.37■■□□□ 1.33
USF3-203ENST00000491165 C15orf41Q9Y2V0 281 aa23.37■■□□□ 1.33
USF3-203ENST00000491165 GOLGA8MH3BSY2 632 aa23.36■■□□□ 1.33
USF3-203ENST00000491165 ALDH3A1P30838 453 aa23.36■■□□□ 1.33
USF3-203ENST00000491165 VSIG1Q86XK7 387 aa23.36■■□□□ 1.33
USF3-203ENST00000491165 ERP27Q96DN0 273 aa23.36■■□□□ 1.33
USF3-203ENST00000491165 THOC1Q96FV9 657 aaKnown RBP23.36■■□□□ 1.33
USF3-203ENST00000491165 ZNF512Q96ME7 567 aaPredicted RBP23.36■■□□□ 1.33
USF3-203ENST00000491165 CORO1BQ9BR76 489 aa23.36■■□□□ 1.33
USF3-203ENST00000491165 SSU72Q9NP77 194 aaKnown RBP23.36■■□□□ 1.33
USF3-203ENST00000491165 A0A1W2PPM1 405 aa23.36■■□□□ 1.33
USF3-203ENST00000491165 ZNF840PA6NDX5 716 aa23.36■■□□□ 1.33
USF3-203ENST00000491165 CAPN9O14815 690 aa23.36■■□□□ 1.33
USF3-203ENST00000491165 MDM4O15151 490 aa23.36■■□□□ 1.33
USF3-203ENST00000491165 LRCH4O75427 683 aa23.36■■□□□ 1.33
USF3-203ENST00000491165 DCTN3O75935 186 aa23.36■■□□□ 1.33
USF3-203ENST00000491165 F11P03951 625 aa23.36■■□□□ 1.33
USF3-203ENST00000491165 GJA1P17302 382 aa23.36■■□□□ 1.33
USF3-203ENST00000491165 HOXA9P31269 272 aa23.36■■□□□ 1.33
USF3-203ENST00000491165 NOS2P35228 1153 aa23.36■■□□□ 1.33
USF3-203ENST00000491165 ARL4CP56559 192 aa23.36■■□□□ 1.33
USF3-203ENST00000491165 GPX6P59796 221 aa23.36■■□□□ 1.33
USF3-203ENST00000491165 DYNLT1P63172 113 aa23.36■■□□□ 1.33
USF3-203ENST00000491165 OTUD4Q01804 1114 aaKnown RBP23.36■■□□□ 1.33
USF3-203ENST00000491165 SLC1A5Q15758 541 aa23.36■■□□□ 1.33
USF3-203ENST00000491165 BTBD8Q5XKL5 378 aa23.36■■□□□ 1.33
USF3-203ENST00000491165 TMC5Q6UXY8 1006 aa23.36■■□□□ 1.33
USF3-203ENST00000491165 ATP11CQ8NB49 1132 aa23.36■■□□□ 1.33
USF3-203ENST00000491165 TTC13Q8NBP0 860 aa23.36■■□□□ 1.33
USF3-203ENST00000491165 RSRC1Q96IZ7 334 aaKnown RBP23.36■■□□□ 1.33
USF3-203ENST00000491165 NPY6RQ99463 290 aa23.36■■□□□ 1.33
USF3-203ENST00000491165 TLR8Q9NR97 1041 aaKnown RBP23.36■■□□□ 1.33
USF3-203ENST00000491165 ABCC13Q9NSE7 274 aa23.36■■□□□ 1.33
USF3-203ENST00000491165 MTPAPQ9NVV4 582 aaKnown RBP eCLIP23.36■■□□□ 1.33
USF3-203ENST00000491165 CHKBQ9Y259 395 aa23.36■■□□□ 1.33
USF3-203ENST00000491165 ASB3Q9Y575 518 aa23.36■■□□□ 1.33
USF3-203ENST00000491165 BANF1O75531 89 aa23.35■■□□□ 1.33
USF3-203ENST00000491165 KRT7P08729 469 aa23.35■■□□□ 1.33
USF3-203ENST00000491165 SDC4P31431 198 aa23.35■■□□□ 1.33
USF3-203ENST00000491165 NTHL1P78549 312 aa23.35■■□□□ 1.33
USF3-203ENST00000491165 SLC25A11Q02978 314 aaKnown RBP23.35■■□□□ 1.33
USF3-203ENST00000491165 DLX2Q07687 328 aaPredicted RBP23.35■■□□□ 1.33
Retrieved 100 of 20,778 RNA–protein pairs in 41.7 ms