RNA–Protein interactions for RNA: ENST00000491106.1

SNRNP40-207, Transcript of small nuclear ribonucleoprotein U5 subunit 40, humanhuman

TSL 2

Gene SNRNP40, Length 459 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNRNP40-207ENST00000491106 MORC4Q8TE76 937 aa2.19□□□□□ -2.06
SNRNP40-207ENST00000491106 AENQ8WTP8 325 aaKnown RBP2.19□□□□□ -2.06
SNRNP40-207ENST00000491106 TAF4BQ92750 862 aa2.19□□□□□ -2.06
SNRNP40-207ENST00000491106 P3H4Q92791 437 aa2.19□□□□□ -2.06
SNRNP40-207ENST00000491106 SECISBP2LQ93073 1101 aaKnown RBP2.19□□□□□ -2.06
SNRNP40-207ENST00000491106 COA7Q96BR5 231 aa2.19□□□□□ -2.06
SNRNP40-207ENST00000491106 FAM136AQ96C01 138 aa2.19□□□□□ -2.06
SNRNP40-207ENST00000491106 NSUN4Q96CB9 384 aaKnown RBP2.19□□□□□ -2.06
SNRNP40-207ENST00000491106 LRRC45Q96CN5 670 aa2.19□□□□□ -2.06
SNRNP40-207ENST00000491106 ALS2CR12Q96Q35 445 aa2.19□□□□□ -2.06
SNRNP40-207ENST00000491106 MTMR9Q96QG7 549 aa2.19□□□□□ -2.06
SNRNP40-207ENST00000491106 CCT8L2Q96SF2 557 aa2.19□□□□□ -2.06
SNRNP40-207ENST00000491106 OSBPL9Q96SU4 736 aa2.19□□□□□ -2.06
SNRNP40-207ENST00000491106 RUFY1Q96T51 708 aa2.19□□□□□ -2.06
SNRNP40-207ENST00000491106 TSG101Q99816 390 aa2.19□□□□□ -2.06
SNRNP40-207ENST00000491106 RIOK1Q9BRS2 568 aaKnown RBP2.19□□□□□ -2.06
SNRNP40-207ENST00000491106 PAGR1Q9BTK6 254 aa2.19□□□□□ -2.06
SNRNP40-207ENST00000491106 CNPPD1Q9BV87 410 aa2.19□□□□□ -2.06
SNRNP40-207ENST00000491106 MXD3Q9BW11 206 aa2.19□□□□□ -2.06
SNRNP40-207ENST00000491106 TRIM9Q9C026 710 aa2.19□□□□□ -2.06
SNRNP40-207ENST00000491106 NYXQ9GZU5 481 aa2.19□□□□□ -2.06
SNRNP40-207ENST00000491106 NT5C3AQ9H0P0 336 aa2.19□□□□□ -2.06
SNRNP40-207ENST00000491106 ISCUQ9H1K1 167 aa2.19□□□□□ -2.06
SNRNP40-207ENST00000491106 BLZF1Q9H2G9 400 aa2.19□□□□□ -2.06
SNRNP40-207ENST00000491106 METTL14Q9HCE5 456 aaKnown RBP2.19□□□□□ -2.06
SNRNP40-207ENST00000491106 EPB41L5Q9HCM4 733 aa2.19□□□□□ -2.06
SNRNP40-207ENST00000491106 SARS2Q9NP81 518 aaKnown RBP2.19□□□□□ -2.06
SNRNP40-207ENST00000491106 KMT5AQ9NQR1 393 aa2.19□□□□□ -2.06
SNRNP40-207ENST00000491106 PRDM11Q9NQV5 511 aa2.19□□□□□ -2.06
SNRNP40-207ENST00000491106 BARHL2Q9NY43 387 aa2.19□□□□□ -2.06
SNRNP40-207ENST00000491106 TAB2Q9NYJ8 693 aa2.19□□□□□ -2.06
SNRNP40-207ENST00000491106 TFCP2L1Q9NZI6 479 aa2.19□□□□□ -2.06
SNRNP40-207ENST00000491106 EHD3Q9NZN3 535 aa2.19□□□□□ -2.06
SNRNP40-207ENST00000491106 LCMT1Q9UIC8 334 aa2.19□□□□□ -2.06
SNRNP40-207ENST00000491106 TTC7AQ9ULT0 858 aaPredicted RBP2.19□□□□□ -2.06
SNRNP40-207ENST00000491106 PCDHA6Q9UN73 950 aa2.19□□□□□ -2.06
SNRNP40-207ENST00000491106 FRMD4BQ9Y2L6 1034 aa2.19□□□□□ -2.06
SNRNP40-207ENST00000491106 DDX52Q9Y2R4 599 aaKnown RBP eCLIP2.19□□□□□ -2.06
SNRNP40-207ENST00000491106 DAAM1Q9Y4D1 1078 aa2.19□□□□□ -2.06
SNRNP40-207ENST00000491106 HYOU1Q9Y4L1 999 aa2.19□□□□□ -2.06
SNRNP40-207ENST00000491106 PCDHB1Q9Y5F3 818 aa2.19□□□□□ -2.06
SNRNP40-207ENST00000491106 FAM169AQ9Y6X4 670 aa2.19□□□□□ -2.06
SNRNP40-207ENST00000491106 DDX60Q8IY21 1712 aaKnown RBP2.19□□□□□ -2.06
SNRNP40-207ENST00000491106 C1orf167Q5SNV9 1468 aa2.19□□□□□ -2.06
SNRNP40-207ENST00000491106 ITGB4P16144 1822 aa2.19□□□□□ -2.06
SNRNP40-207ENST00000491106 C5P01031 1676 aa2.18□□□□□ -2.06
SNRNP40-207ENST00000491106 TNKSO95271 1327 aa2.18□□□□□ -2.06
SNRNP40-207ENST00000491106 SYNRGQ9UMZ2 1314 aa2.18□□□□□ -2.06
SNRNP40-207ENST00000491106 ATRNO75882 1429 aa2.18□□□□□ -2.06
SNRNP40-207ENST00000491106 MYH9P35579 1960 aaKnown RBP2.18□□□□□ -2.06
SNRNP40-207ENST00000491106 MSANTD3-TMEFF1A0A0A6YYJ0 341 aa2.18□□□□□ -2.06
SNRNP40-207ENST00000491106 A0A0U1RQJ8 604 aa2.18□□□□□ -2.06
SNRNP40-207ENST00000491106 A0A1B0GUA9 196 aa2.18□□□□□ -2.06
SNRNP40-207ENST00000491106 GOLGA6L7A0A1B0GV03 622 aa2.18□□□□□ -2.06
SNRNP40-207ENST00000491106 ESYT2A0FGR8 921 aa2.18□□□□□ -2.06
SNRNP40-207ENST00000491106 LRRC14BA6NHZ5 514 aa2.18□□□□□ -2.06
SNRNP40-207ENST00000491106 GOLGA6L10A6NI86 522 aa2.18□□□□□ -2.06
SNRNP40-207ENST00000491106 CCDC169A6NNP5 214 aa2.18□□□□□ -2.06
SNRNP40-207ENST00000491106 B4DLN1 442 aa2.18□□□□□ -2.06
SNRNP40-207ENST00000491106 H0YHG0 523 aa2.18□□□□□ -2.06
SNRNP40-207ENST00000491106 UBE2Q2LH0YL09 131 aa2.18□□□□□ -2.06
SNRNP40-207ENST00000491106 PDXKO00764 312 aa2.18□□□□□ -2.06
SNRNP40-207ENST00000491106 NDUFAB1O14561 156 aa2.18□□□□□ -2.06
SNRNP40-207ENST00000491106 CETN3O15182 167 aa2.18□□□□□ -2.06
SNRNP40-207ENST00000491106 PPM1DO15297 605 aa2.18□□□□□ -2.06
SNRNP40-207ENST00000491106 EIF3HO15372 352 aaKnown RBP eCLIP2.18□□□□□ -2.06
SNRNP40-207ENST00000491106 ASAP2O43150 1006 aa2.18□□□□□ -2.06
SNRNP40-207ENST00000491106 PPIP5K2O43314 1243 aa2.18□□□□□ -2.06
SNRNP40-207ENST00000491106 SGTAO43765 313 aa2.18□□□□□ -2.06
SNRNP40-207ENST00000491106 MARCH6O60337 910 aa2.18□□□□□ -2.06
SNRNP40-207ENST00000491106 CCNT1O60563 726 aaKnown RBP2.18□□□□□ -2.06
SNRNP40-207ENST00000491106 EXOC3O60645 756 aa2.18□□□□□ -2.06
SNRNP40-207ENST00000491106 PROP1O75360 226 aa2.18□□□□□ -2.06
SNRNP40-207ENST00000491106 PRDM1O75626 825 aa2.18□□□□□ -2.06
SNRNP40-207ENST00000491106 BBOX1O75936 387 aa2.18□□□□□ -2.06
SNRNP40-207ENST00000491106 KIAA0754O94854 1291 aa2.18□□□□□ -2.06
SNRNP40-207ENST00000491106 NXPH3O95157 252 aa2.18□□□□□ -2.06
SNRNP40-207ENST00000491106 ARIH2O95376 493 aa2.18□□□□□ -2.06
SNRNP40-207ENST00000491106 FAM107AO95990 144 aa2.18□□□□□ -2.06
SNRNP40-207ENST00000491106 FTLP02792 175 aaPredicted RBP2.18□□□□□ -2.06
SNRNP40-207ENST00000491106 PRKCGP05129 697 aa2.18□□□□□ -2.06
SNRNP40-207ENST00000491106 RHOP08100 348 aa2.18□□□□□ -2.06
SNRNP40-207ENST00000491106 PDHA1P08559 390 aa2.18□□□□□ -2.06
SNRNP40-207ENST00000491106 OR52Z1P0C646 297 aa2.18□□□□□ -2.06
SNRNP40-207ENST00000491106 MYZAPP0CAP1 466 aa2.18□□□□□ -2.06
SNRNP40-207ENST00000491106 TSPY3P0CV98 308 aa2.18□□□□□ -2.06
SNRNP40-207ENST00000491106 TSPY8P0CW00 308 aa2.18□□□□□ -2.06
SNRNP40-207ENST00000491106 GHRP10912 638 aa2.18□□□□□ -2.06
SNRNP40-207ENST00000491106 VEGFAP15692 232 aaPredicted RBP2.18□□□□□ -2.06
SNRNP40-207ENST00000491106 TYRP1P17643 537 aa2.18□□□□□ -2.06
SNRNP40-207ENST00000491106 KELP23276 732 aa2.18□□□□□ -2.06
SNRNP40-207ENST00000491106 CASP1P29466 404 aa2.18□□□□□ -2.06
SNRNP40-207ENST00000491106 CDC25AP30304 524 aa2.18□□□□□ -2.06
SNRNP40-207ENST00000491106 SLC6A4P31645 630 aa2.18□□□□□ -2.06
SNRNP40-207ENST00000491106 RDXP35241 583 aaKnown RBP2.18□□□□□ -2.06
SNRNP40-207ENST00000491106 GCLCP48506 637 aaPredicted RBP2.18□□□□□ -2.06
SNRNP40-207ENST00000491106 PIK3CGP48736 1102 aa2.18□□□□□ -2.06
SNRNP40-207ENST00000491106 NOVP48745 357 aa2.18□□□□□ -2.06
SNRNP40-207ENST00000491106 FNTAP49354 379 aa2.18□□□□□ -2.06
SNRNP40-207ENST00000491106 MMP14P50281 582 aa2.18□□□□□ -2.06
Retrieved 100 of 20,778 RNA–protein pairs in 34.9 ms