RNA–Protein interactions for RNA: ENST00000490399.5

PRPF4B-207, Transcript of pre-mRNA processing factor 4B, humanhuman

TSL 2

Gene PRPF4B, Length 576 nt, Biotype processed transcript, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PRPF4B-207ENST00000490399 A0A1W2PPC1 479 aa4.95□□□□□ -1.62
PRPF4B-207ENST00000490399 EIF3FO00303 357 aaPredicted RBP4.95□□□□□ -1.62
PRPF4B-207ENST00000490399 SYN3O14994 580 aa4.95□□□□□ -1.62
PRPF4B-207ENST00000490399 SGPL1O95470 568 aa4.95□□□□□ -1.62
PRPF4B-207ENST00000490399 WNT1P04628 370 aa4.95□□□□□ -1.62
PRPF4B-207ENST00000490399 CKMT1AP12532 417 aa4.95□□□□□ -1.62
PRPF4B-207ENST00000490399 BIRC3Q13489 604 aa4.95□□□□□ -1.62
PRPF4B-207ENST00000490399 ALKBH1Q13686 389 aaKnown RBP4.95□□□□□ -1.62
PRPF4B-207ENST00000490399 PWP2Q15269 919 aaKnown RBP4.95□□□□□ -1.62
PRPF4B-207ENST00000490399 TRIP6Q15654 476 aaKnown RBP4.95□□□□□ -1.62
PRPF4B-207ENST00000490399 MIDNQ504T8 468 aa4.95□□□□□ -1.62
PRPF4B-207ENST00000490399 FBXO47Q5MNV8 452 aa4.95□□□□□ -1.62
PRPF4B-207ENST00000490399 C10orf76Q5T2E6 689 aa4.95□□□□□ -1.62
PRPF4B-207ENST00000490399 SHC4Q6S5L8 630 aa4.95□□□□□ -1.62
PRPF4B-207ENST00000490399 RINLQ6ZS11 566 aa4.95□□□□□ -1.62
PRPF4B-207ENST00000490399 UBE2Q1Q7Z7E8 422 aa4.95□□□□□ -1.62
PRPF4B-207ENST00000490399 ZNF354CQ86Y25 554 aa4.95□□□□□ -1.62
PRPF4B-207ENST00000490399 SUGP2Q8IX01 1082 aaKnown RBP eCLIP4.95□□□□□ -1.62
PRPF4B-207ENST00000490399 CPXCR1Q8N123 301 aa4.95□□□□□ -1.62
PRPF4B-207ENST00000490399 TMEM217Q8N7C4 229 aa4.95□□□□□ -1.62
PRPF4B-207ENST00000490399 NANOGP1Q8N7R0 232 aa4.95□□□□□ -1.62
PRPF4B-207ENST00000490399 EME1Q96AY2 570 aa4.95□□□□□ -1.62
PRPF4B-207ENST00000490399 SDCCAG3Q96C92 435 aa4.95□□□□□ -1.62
PRPF4B-207ENST00000490399 ZNF778Q96MU6 729 aa4.95□□□□□ -1.62
PRPF4B-207ENST00000490399 IL21RQ9HBE5 538 aa4.95□□□□□ -1.62
PRPF4B-207ENST00000490399 SLC22A11Q9NSA0 550 aa4.95□□□□□ -1.62
PRPF4B-207ENST00000490399 THAP1Q9NVV9 213 aa4.95□□□□□ -1.62
PRPF4B-207ENST00000490399 TNFSF13BQ9Y275 285 aa4.95□□□□□ -1.62
PRPF4B-207ENST00000490399 DTX4Q9Y2E6 619 aa4.95□□□□□ -1.62
PRPF4B-207ENST00000490399 DNAJC16Q9Y2G8 782 aa4.95□□□□□ -1.62
PRPF4B-207ENST00000490399 RRP7AQ9Y3A4 280 aaKnown RBP4.95□□□□□ -1.62
PRPF4B-207ENST00000490399 PKP3Q9Y446 797 aa4.95□□□□□ -1.62
PRPF4B-207ENST00000490399 PLEKHD1A6NEE1 506 aa4.94□□□□□ -1.62
PRPF4B-207ENST00000490399 MSI1O43347 362 aaKnown RBP4.94□□□□□ -1.62
PRPF4B-207ENST00000490399 USP12O75317 370 aa4.94□□□□□ -1.62
PRPF4B-207ENST00000490399 PKMP14618 531 aaKnown RBP4.94□□□□□ -1.62
PRPF4B-207ENST00000490399 CPA1P15085 419 aa4.94□□□□□ -1.62
PRPF4B-207ENST00000490399 TYK2P29597 1187 aa4.94□□□□□ -1.62
PRPF4B-207ENST00000490399 CIITAP33076 1130 aa4.94□□□□□ -1.62
PRPF4B-207ENST00000490399 B4GALNT4Q76KP1 1039 aa4.94□□□□□ -1.62
PRPF4B-207ENST00000490399 ANKRD13BQ86YJ7 626 aa4.94□□□□□ -1.62
PRPF4B-207ENST00000490399 ANKRD18AQ8IVF6 992 aa4.94□□□□□ -1.62
PRPF4B-207ENST00000490399 SCN4BQ8IWT1 228 aa4.94□□□□□ -1.62
PRPF4B-207ENST00000490399 BCAS4Q8TDM0 211 aa4.94□□□□□ -1.62
PRPF4B-207ENST00000490399 DENND1AQ8TEH3 1009 aa4.94□□□□□ -1.62
PRPF4B-207ENST00000490399 RPL36ALQ969Q0 106 aaKnown RBP4.94□□□□□ -1.62
PRPF4B-207ENST00000490399 PYM1Q9BRP8 204 aaKnown RBP4.94□□□□□ -1.62
PRPF4B-207ENST00000490399 FRMD8Q9BZ67 464 aaPredicted RBP4.94□□□□□ -1.62
PRPF4B-207ENST00000490399 ZNF304Q9HCX3 659 aa4.94□□□□□ -1.62
PRPF4B-207ENST00000490399 TMLHEQ9NVH6 421 aa4.94□□□□□ -1.62
PRPF4B-207ENST00000490399 SAGE1Q9NXZ1 904 aa4.94□□□□□ -1.62
PRPF4B-207ENST00000490399 ZNF70Q9UC06 446 aaPredicted RBP4.94□□□□□ -1.62
PRPF4B-207ENST00000490399 LAMP3Q9UQV4 416 aa4.94□□□□□ -1.62
PRPF4B-207ENST00000490399 ZSCAN21Q9Y5A6 473 aaPredicted RBP4.94□□□□□ -1.62
PRPF4B-207ENST00000490399 TRBV5-3A0A0A0MS03 114 aa4.93□□□□□ -1.62
PRPF4B-207ENST00000490399 RHODO00212 210 aa4.93□□□□□ -1.62
PRPF4B-207ENST00000490399 SEPT4O43236 478 aa4.93□□□□□ -1.62
PRPF4B-207ENST00000490399 ARSAP15289 507 aa4.93□□□□□ -1.62
PRPF4B-207ENST00000490399 HOXB9P17482 250 aaPredicted RBP4.93□□□□□ -1.62
PRPF4B-207ENST00000490399 CNTFP26441 200 aa4.93□□□□□ -1.62
PRPF4B-207ENST00000490399 PNPLA4P41247 253 aa4.93□□□□□ -1.62
PRPF4B-207ENST00000490399 PAPOLAP51003 745 aaKnown RBP4.93□□□□□ -1.62
PRPF4B-207ENST00000490399 ZNF81P51508 661 aa4.93□□□□□ -1.62
PRPF4B-207ENST00000490399 MTX1Q13505 466 aa4.93□□□□□ -1.62
PRPF4B-207ENST00000490399 SLC12A1Q13621 1099 aa4.93□□□□□ -1.62
PRPF4B-207ENST00000490399 GALNT3Q14435 633 aa4.93□□□□□ -1.62
PRPF4B-207ENST00000490399 RBMS2Q15434 407 aaKnown RBP4.93□□□□□ -1.62
PRPF4B-207ENST00000490399 RUNDC3AQ59EK9 446 aa4.93□□□□□ -1.62
PRPF4B-207ENST00000490399 C10orf25Q5T742 122 aa4.93□□□□□ -1.62
PRPF4B-207ENST00000490399 LRCH2Q5VUJ6 765 aa4.93□□□□□ -1.62
PRPF4B-207ENST00000490399 LRIG3Q6UXM1 1119 aa4.93□□□□□ -1.62
PRPF4B-207ENST00000490399 CYB5R4Q7L1T6 521 aa4.93□□□□□ -1.62
PRPF4B-207ENST00000490399 KLBQ86Z14 1044 aa4.93□□□□□ -1.62
PRPF4B-207ENST00000490399 STAMQ92783 540 aa4.93□□□□□ -1.62
PRPF4B-207ENST00000490399 GCC1Q96CN9 775 aa4.93□□□□□ -1.62
PRPF4B-207ENST00000490399 COQ8BQ96D53 544 aa4.93□□□□□ -1.62
PRPF4B-207ENST00000490399 RIC8AQ9NPQ8 531 aa4.93□□□□□ -1.62
PRPF4B-207ENST00000490399 TMEM248Q9NWD8 314 aa4.93□□□□□ -1.62
PRPF4B-207ENST00000490399 TUBA8Q9NY65 449 aaPredicted RBP4.93□□□□□ -1.62
PRPF4B-207ENST00000490399 RRN3Q9NYV6 651 aa4.93□□□□□ -1.62
PRPF4B-207ENST00000490399 MSRB1Q9NZV6 116 aa4.93□□□□□ -1.62
PRPF4B-207ENST00000490399 RNF7Q9UBF6 113 aa4.93□□□□□ -1.62
PRPF4B-207ENST00000490399 TTBK1Q5TCY1 1321 aaPredicted RBP4.93□□□□□ -1.62
PRPF4B-207ENST00000490399 TTC3P53804 2025 aa4.92□□□□□ -1.62
PRPF4B-207ENST00000490399 DPPA5A6NC42 116 aa4.92□□□□□ -1.62
PRPF4B-207ENST00000490399 KCNJ18B7U540 433 aa4.92□□□□□ -1.62
PRPF4B-207ENST00000490399 F8W810 466 aa4.92□□□□□ -1.62
PRPF4B-207ENST00000490399 CDK4P11802 303 aa4.92□□□□□ -1.62
PRPF4B-207ENST00000490399 CYP4B1P13584 511 aa4.92□□□□□ -1.62
PRPF4B-207ENST00000490399 HSD3B1P14060 373 aa4.92□□□□□ -1.62
PRPF4B-207ENST00000490399 PRF1P14222 555 aa4.92□□□□□ -1.62
PRPF4B-207ENST00000490399 MAPK9P45984 424 aa4.92□□□□□ -1.62
PRPF4B-207ENST00000490399 RHAGQ02094 409 aa4.92□□□□□ -1.62
PRPF4B-207ENST00000490399 THOC5Q13769 683 aaKnown RBP4.92□□□□□ -1.62
PRPF4B-207ENST00000490399 GXYLT1Q4G148 440 aa4.92□□□□□ -1.62
PRPF4B-207ENST00000490399 CTXN3Q4LDR2 81 aa4.92□□□□□ -1.62
PRPF4B-207ENST00000490399 HMBOX1Q6NT76 420 aa4.92□□□□□ -1.62
PRPF4B-207ENST00000490399 DEF8Q6ZN54 512 aa4.92□□□□□ -1.62
PRPF4B-207ENST00000490399 CPOQ8IVL8 374 aa4.92□□□□□ -1.62
PRPF4B-207ENST00000490399 BRSK2Q8IWQ3 736 aa4.92□□□□□ -1.62
Retrieved 100 of 20,778 RNA–protein pairs in 25.4 ms