RNA–Protein interactions for RNA: ENST00000490207.5

SMC4-222, Transcript of structural maintenance of chromosomes 4, humanhuman

TSL 5

Gene SMC4, Length 821 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMC4-222ENST00000490207 SULT2A1Q06520 285 aa20.34■□□□□ 0.85
SMC4-222ENST00000490207 ZNF177Q13360 481 aaPredicted RBP20.34■□□□□ 0.85
SMC4-222ENST00000490207 ARID5BQ14865 1188 aa20.34■□□□□ 0.85
SMC4-222ENST00000490207 FILIP1LQ4L180 1135 aa20.34■□□□□ 0.85
SMC4-222ENST00000490207 BNIPLQ7Z465 357 aa20.34■□□□□ 0.85
SMC4-222ENST00000490207 PHLDB2Q86SQ0 1253 aa20.34■□□□□ 0.85
SMC4-222ENST00000490207 RPL10LQ96L21 214 aaKnown RBP20.34■□□□□ 0.85
SMC4-222ENST00000490207 RSPH9Q9H1X1 276 aaPredicted RBP20.34■□□□□ 0.85
SMC4-222ENST00000490207 RTN4Q9NQC3 1192 aaKnown RBP20.34■□□□□ 0.85
SMC4-222ENST00000490207 TMPRSS4Q9NRS4 437 aa20.34■□□□□ 0.85
SMC4-222ENST00000490207 SUSD2Q9UGT4 822 aa20.34■□□□□ 0.85
SMC4-222ENST00000490207 SLC6A14Q9UN76 642 aa20.34■□□□□ 0.85
SMC4-222ENST00000490207 SNX10Q9Y5X0 201 aa20.34■□□□□ 0.85
SMC4-222ENST00000490207 GON4LQ3T8J9 2241 aa20.33■□□□□ 0.85
SMC4-222ENST00000490207 TM4SF5O14894 197 aa20.33■□□□□ 0.85
SMC4-222ENST00000490207 SERPINF2P08697 491 aa20.33■□□□□ 0.85
SMC4-222ENST00000490207 FERP16591 822 aa20.33■□□□□ 0.85
SMC4-222ENST00000490207 ENGP17813 658 aa20.33■□□□□ 0.85
SMC4-222ENST00000490207 PLK1P53350 603 aa20.33■□□□□ 0.85
SMC4-222ENST00000490207 GSCP56915 257 aaPredicted RBP20.33■□□□□ 0.85
SMC4-222ENST00000490207 ATP11AP98196 1134 aa20.33■□□□□ 0.85
SMC4-222ENST00000490207 DCAF12L1Q5VU92 463 aa20.33■□□□□ 0.85
SMC4-222ENST00000490207 DAB2IPQ5VWQ8 1189 aa20.33■□□□□ 0.85
SMC4-222ENST00000490207 LRRC31Q6UY01 552 aa20.33■□□□□ 0.85
SMC4-222ENST00000490207 FAM131BQ86XD5 332 aa20.33■□□□□ 0.85
SMC4-222ENST00000490207 CADM4Q8NFZ8 388 aa20.33■□□□□ 0.85
SMC4-222ENST00000490207 PPP1R9BQ96SB3 815 aa20.33■□□□□ 0.85
SMC4-222ENST00000490207 AGPAT1Q99943 283 aa20.33■□□□□ 0.85
SMC4-222ENST00000490207 CAPN10Q9HC96 672 aa20.33■□□□□ 0.85
SMC4-222ENST00000490207 FSCN3Q9NQT6 498 aa20.33■□□□□ 0.85
SMC4-222ENST00000490207 ADAM22Q9P0K1 906 aa20.33■□□□□ 0.85
SMC4-222ENST00000490207 NUMA1Q14980 2115 aa20.32■□□□□ 0.84
SMC4-222ENST00000490207 SYCE3A1L190 88 aa20.32■□□□□ 0.84
SMC4-222ENST00000490207 TARSL2A2RTX5 802 aaKnown RBP20.32■□□□□ 0.84
SMC4-222ENST00000490207 CDX4O14627 284 aaPredicted RBP20.32■□□□□ 0.84
SMC4-222ENST00000490207 RNASEH1O60930 286 aaKnown RBP20.32■□□□□ 0.84
SMC4-222ENST00000490207 CNTN5O94779 1100 aa20.32■□□□□ 0.84
SMC4-222ENST00000490207 GJB6O95452 261 aa20.32■□□□□ 0.84
SMC4-222ENST00000490207 CALB1P05937 261 aa20.32■□□□□ 0.84
SMC4-222ENST00000490207 CCDC172P0C7W6 258 aa20.32■□□□□ 0.84
SMC4-222ENST00000490207 SDC4P31431 198 aa20.32■□□□□ 0.84
SMC4-222ENST00000490207 NNMTP40261 264 aa20.32■□□□□ 0.84
SMC4-222ENST00000490207 MAPK8P45983 427 aa20.32■□□□□ 0.84
SMC4-222ENST00000490207 PTP4A2Q12974 167 aa20.32■□□□□ 0.84
SMC4-222ENST00000490207 CDO1Q16878 200 aa20.32■□□□□ 0.84
SMC4-222ENST00000490207 C9orf64Q5T6V5 341 aa20.32■□□□□ 0.84
SMC4-222ENST00000490207 ACBD5Q5T8D3 534 aaPredicted RBP20.32■□□□□ 0.84
SMC4-222ENST00000490207 PHF13Q86YI8 300 aaPredicted RBP20.32■□□□□ 0.84
SMC4-222ENST00000490207 ZNF683Q8IZ20 524 aa20.32■□□□□ 0.84
SMC4-222ENST00000490207 OR52K2Q8NGK3 314 aa20.32■□□□□ 0.84
SMC4-222ENST00000490207 JOSD2Q8TAC2 188 aa20.32■□□□□ 0.84
SMC4-222ENST00000490207 RXFP2Q8WXD0 754 aa20.32■□□□□ 0.84
SMC4-222ENST00000490207 PABPC3Q9H361 631 aaKnown RBP20.32■□□□□ 0.84
SMC4-222ENST00000490207 SLCO3A1Q9UIG8 710 aa20.32■□□□□ 0.84
SMC4-222ENST00000490207 SLC25A13Q9UJS0 675 aa20.32■□□□□ 0.84
SMC4-222ENST00000490207 VPS28Q9UK41 221 aa20.32■□□□□ 0.84
SMC4-222ENST00000490207 SCML1Q9UN30 329 aa20.32■□□□□ 0.84
SMC4-222ENST00000490207 C2CD4BA6NLJ0 364 aa20.31■□□□□ 0.84
SMC4-222ENST00000490207 RHOCP08134 193 aa20.31■□□□□ 0.84
SMC4-222ENST00000490207 GNSP15586 552 aa20.31■□□□□ 0.84
SMC4-222ENST00000490207 MAOBP27338 520 aa20.31■□□□□ 0.84
SMC4-222ENST00000490207 GFPT1Q06210 699 aaPredicted RBP20.31■□□□□ 0.84
SMC4-222ENST00000490207 IQCB1Q15051 598 aa20.31■□□□□ 0.84
SMC4-222ENST00000490207 C15orf59Q2T9L4 293 aaPredicted RBP20.31■□□□□ 0.84
SMC4-222ENST00000490207 ALFQ53S48 1182 aa20.31■□□□□ 0.84
SMC4-222ENST00000490207 MON1BQ7L1V2 547 aa20.31■□□□□ 0.84
SMC4-222ENST00000490207 DNASE2BQ8WZ79 361 aa20.31■□□□□ 0.84
SMC4-222ENST00000490207 ALG14Q96F25 216 aa20.31■□□□□ 0.84
SMC4-222ENST00000490207 C1orf74Q96LT6 269 aa20.31■□□□□ 0.84
SMC4-222ENST00000490207 HAPLN3Q96S86 360 aa20.31■□□□□ 0.84
SMC4-222ENST00000490207 FEM1AQ9BSK4 669 aa20.31■□□□□ 0.84
SMC4-222ENST00000490207 SELENOOQ9BVL4 669 aa20.31■□□□□ 0.84
SMC4-222ENST00000490207 BTBD1Q9H0C5 482 aa20.31■□□□□ 0.84
SMC4-222ENST00000490207 MUC3BQ9H195 1237 aa20.31■□□□□ 0.84
SMC4-222ENST00000490207 PCED1AQ9H1Q7 454 aa20.31■□□□□ 0.84
SMC4-222ENST00000490207 MYO6Q9UM54 1294 aa20.31■□□□□ 0.84
SMC4-222ENST00000490207 TBC1D30Q9Y2I9 924 aa20.31■□□□□ 0.84
SMC4-222ENST00000490207 A0A1B0GTH6 734 aa20.3■□□□□ 0.84
SMC4-222ENST00000490207 METTL12A8MUP2 240 aa20.3■□□□□ 0.84
SMC4-222ENST00000490207 E9PAM4 449 aa20.3■□□□□ 0.84
SMC4-222ENST00000490207 ENDOD1O94919 500 aa20.3■□□□□ 0.84
SMC4-222ENST00000490207 SEMA4FO95754 770 aa20.3■□□□□ 0.84
SMC4-222ENST00000490207 ACSL1P33121 698 aa20.3■□□□□ 0.84
SMC4-222ENST00000490207 PTPN9P43378 593 aa20.3■□□□□ 0.84
SMC4-222ENST00000490207 ATXN3P54252 364 aaPredicted RBP20.3■□□□□ 0.84
SMC4-222ENST00000490207 CST6Q15828 149 aa20.3■□□□□ 0.84
SMC4-222ENST00000490207 UAP1L1Q3KQV9 507 aa20.3■□□□□ 0.84
SMC4-222ENST00000490207 CCDC14Q49A88 953 aa20.3■□□□□ 0.84
SMC4-222ENST00000490207 USP30Q70CQ3 517 aa20.3■□□□□ 0.84
SMC4-222ENST00000490207 MMAAQ8IVH4 418 aaKnown RBP20.3■□□□□ 0.84
SMC4-222ENST00000490207 ZCCHC9Q8N567 271 aaKnown RBP20.3■□□□□ 0.84
SMC4-222ENST00000490207 C3orf20Q8ND61 904 aa20.3■□□□□ 0.84
SMC4-222ENST00000490207 SNX19Q92543 992 aa20.3■□□□□ 0.84
SMC4-222ENST00000490207 BAP1Q92560 729 aa20.3■□□□□ 0.84
SMC4-222ENST00000490207 GTPBP2Q9BX10 602 aaKnown RBP20.3■□□□□ 0.84
SMC4-222ENST00000490207 MIR1-1HGQ9H1L0 117 aa20.3■□□□□ 0.84
SMC4-222ENST00000490207 C6orf106Q9H6K1 298 aaPredicted RBP20.3■□□□□ 0.84
SMC4-222ENST00000490207 SGK2Q9HBY8 427 aa20.3■□□□□ 0.84
SMC4-222ENST00000490207 MPP6Q9NZW5 540 aa20.3■□□□□ 0.84
SMC4-222ENST00000490207 NCKAP1Q9Y2A7 1128 aa20.3■□□□□ 0.84
Retrieved 100 of 20,778 RNA–protein pairs in 52.6 ms