RNA–Protein interactions for RNA: ENST00000489417.5

SND1-214, Transcript of staphylococcal nuclease and tudor domain containing 1, humanhuman

TSL 2

Gene SND1, Length 1,447 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SND1-214ENST00000489417 RPS24P62847 133 aaKnown RBP21.42■■□□□ 1.02
SND1-214ENST00000489417 GPS1Q13098 491 aa21.42■■□□□ 1.02
SND1-214ENST00000489417 MAP9Q49MG5 647 aa21.42■■□□□ 1.02
SND1-214ENST00000489417 CHST9Q7L1S5 443 aa21.42■■□□□ 1.02
SND1-214ENST00000489417 BBS7Q8IWZ6 715 aa21.42■■□□□ 1.02
SND1-214ENST00000489417 ATPAF2Q8N5M1 289 aa21.42■■□□□ 1.02
SND1-214ENST00000489417 LRRC45Q96CN5 670 aa21.42■■□□□ 1.02
SND1-214ENST00000489417 P2RY11Q96G91 374 aa21.42■■□□□ 1.02
SND1-214ENST00000489417 RANBP2P49792 3224 aaKnown RBP21.42■■□□□ 1.02
SND1-214ENST00000489417 DOCK6Q96HP0 2047 aa21.41■■□□□ 1.02
SND1-214ENST00000489417 CLDN11O75508 207 aa21.41■■□□□ 1.02
SND1-214ENST00000489417 STK10O94804 968 aaKnown RBP21.41■■□□□ 1.02
SND1-214ENST00000489417 SEC31AO94979 1220 aaKnown RBP21.41■■□□□ 1.02
SND1-214ENST00000489417 TCF3P15923 654 aa21.41■■□□□ 1.02
SND1-214ENST00000489417 ITIH2P19823 946 aa21.41■■□□□ 1.02
SND1-214ENST00000489417 ECHS1P30084 290 aa21.41■■□□□ 1.02
SND1-214ENST00000489417 OR1E1P30953 314 aa21.41■■□□□ 1.02
SND1-214ENST00000489417 ACTN2P35609 894 aa21.41■■□□□ 1.02
SND1-214ENST00000489417 NRLP54845 237 aa21.41■■□□□ 1.02
SND1-214ENST00000489417 ZNF33AQ06730 810 aa21.41■■□□□ 1.02
SND1-214ENST00000489417 USP4Q13107 963 aa21.41■■□□□ 1.02
SND1-214ENST00000489417 CALCOCO2Q13137 446 aa21.41■■□□□ 1.02
SND1-214ENST00000489417 CBX2Q14781 532 aaPredicted RBP21.41■■□□□ 1.02
SND1-214ENST00000489417 GRIN2CQ14957 1233 aa21.41■■□□□ 1.02
SND1-214ENST00000489417 P3H1Q32P28 736 aa21.41■■□□□ 1.02
SND1-214ENST00000489417 IZUMO3Q5VZ72 239 aa21.41■■□□□ 1.02
SND1-214ENST00000489417 POTEHQ6S545 545 aa21.41■■□□□ 1.02
SND1-214ENST00000489417 LRRC49Q8IUZ0 686 aa21.41■■□□□ 1.02
SND1-214ENST00000489417 CCDC13Q8IYE1 715 aa21.41■■□□□ 1.02
SND1-214ENST00000489417 CPXM2Q8N436 756 aa21.41■■□□□ 1.02
SND1-214ENST00000489417 HJURPQ8NCD3 748 aaPredicted RBP21.41■■□□□ 1.02
SND1-214ENST00000489417 BBOF1Q8ND07 529 aa21.41■■□□□ 1.02
SND1-214ENST00000489417 DEPDC1BQ8WUY9 529 aa21.41■■□□□ 1.02
SND1-214ENST00000489417 DGCR8Q8WYQ5 773 aaKnown RBP eCLIP21.41■■□□□ 1.021e-40■■■■■ 53.3
SND1-214ENST00000489417 TSGA13Q96PP4 275 aa21.41■■□□□ 1.02
SND1-214ENST00000489417 PAK5Q9P286 719 aa21.41■■□□□ 1.02
SND1-214ENST00000489417 MTCH2Q9Y6C9 303 aa21.41■■□□□ 1.02
SND1-214ENST00000489417 A0A1B0GVM2 712 aa21.4■■□□□ 1.02
SND1-214ENST00000489417 TCAF2A6NFQ2 919 aa21.4■■□□□ 1.02
SND1-214ENST00000489417 C5orf60A6NFR6 353 aa21.4■■□□□ 1.02
SND1-214ENST00000489417 RASA4BC9J798 803 aa21.4■■□□□ 1.02
SND1-214ENST00000489417 DNALI1O14645 258 aaPredicted RBP21.4■■□□□ 1.02
SND1-214ENST00000489417 MTSS1O43312 755 aa21.4■■□□□ 1.02
SND1-214ENST00000489417 RASA4O43374 803 aa21.4■■□□□ 1.02
SND1-214ENST00000489417 RAMP2O60895 175 aa21.4■■□□□ 1.02
SND1-214ENST00000489417 GCATO75600 419 aa21.4■■□□□ 1.02
SND1-214ENST00000489417 WEE1P30291 646 aa21.4■■□□□ 1.02
SND1-214ENST00000489417 PAPOLAP51003 745 aaKnown RBP21.4■■□□□ 1.02
SND1-214ENST00000489417 CLCN6P51797 869 aa21.4■■□□□ 1.02
SND1-214ENST00000489417 YBEYP58557 167 aaPredicted RBP21.4■■□□□ 1.02
SND1-214ENST00000489417 ZNF77Q15935 545 aa21.4■■□□□ 1.02
SND1-214ENST00000489417 ZDHHC24Q6UX98 284 aa21.4■■□□□ 1.02
SND1-214ENST00000489417 ARID3BQ8IVW6 561 aaPredicted RBP21.4■■□□□ 1.02
SND1-214ENST00000489417 HNRNPLLQ8WVV9 542 aaKnown RBP21.4■■□□□ 1.02
SND1-214ENST00000489417 FAM129AQ9BZQ8 928 aa21.4■■□□□ 1.02
SND1-214ENST00000489417 NEUROG2Q9H2A3 272 aa21.4■■□□□ 1.02
SND1-214ENST00000489417 KIF9Q9HAQ2 790 aa21.4■■□□□ 1.02
SND1-214ENST00000489417 SEPT10Q9P0V9 454 aa21.4■■□□□ 1.02
SND1-214ENST00000489417 DOCK4Q8N1I0 1966 aa21.4■■□□□ 1.02
SND1-214ENST00000489417 C2orf16Q68DN1 1984 aa21.39■■□□□ 1.02
SND1-214ENST00000489417 ZNF559-ZNF177A0A0A6YYI6 481 aaPredicted RBP21.39■■□□□ 1.02
SND1-214ENST00000489417 TYW5A2RUC4 315 aaKnown RBP21.39■■□□□ 1.02
SND1-214ENST00000489417 ARHGAP42A6NI28 874 aa21.39■■□□□ 1.02
SND1-214ENST00000489417 RNF103O00237 685 aa21.39■■□□□ 1.02
SND1-214ENST00000489417 TBL1XO60907 577 aa21.39■■□□□ 1.02
SND1-214ENST00000489417 CCNCP24863 283 aa21.39■■□□□ 1.02
SND1-214ENST00000489417 CHKAP35790 457 aa21.39■■□□□ 1.02
SND1-214ENST00000489417 PLTPP55058 493 aa21.39■■□□□ 1.02
SND1-214ENST00000489417 ZNF177Q13360 481 aaPredicted RBP21.39■■□□□ 1.02
SND1-214ENST00000489417 PARP15Q460N3 678 aa21.39■■□□□ 1.02
SND1-214ENST00000489417 C4orf22Q6V702 233 aa21.39■■□□□ 1.02
SND1-214ENST00000489417 ARHGAP36Q6ZRI8 547 aa21.39■■□□□ 1.02
SND1-214ENST00000489417 NPAS3Q8IXF0 933 aa21.39■■□□□ 1.02
SND1-214ENST00000489417 TDRD5Q8NAT2 981 aaKnown RBP21.39■■□□□ 1.02
SND1-214ENST00000489417 RIN3Q8TB24 985 aa21.39■■□□□ 1.02
SND1-214ENST00000489417 ZSCAN18Q8TBC5 510 aaPredicted RBP21.39■■□□□ 1.02
SND1-214ENST00000489417 CCDC110Q8TBZ0 833 aa21.39■■□□□ 1.02
SND1-214ENST00000489417 AENQ8WTP8 325 aaKnown RBP21.39■■□□□ 1.02
SND1-214ENST00000489417 ART4Q93070 314 aa21.39■■□□□ 1.02
SND1-214ENST00000489417 TMA16Q96EY4 203 aaKnown RBP21.39■■□□□ 1.02
SND1-214ENST00000489417 HMCESQ96FZ2 354 aa21.39■■□□□ 1.02
SND1-214ENST00000489417 ZDHHC18Q9NUE0 388 aa21.39■■□□□ 1.02
SND1-214ENST00000489417 CLEC1BQ9P126 229 aa21.39■■□□□ 1.02
SND1-214ENST00000489417 TRBV21OR9-2A0A075B6F4 123 aaPredicted RBP21.38■■□□□ 1.01
SND1-214ENST00000489417 A0A0A0MRY4 1105 aa21.38■■□□□ 1.01
SND1-214ENST00000489417 NDC80O14777 642 aa21.38■■□□□ 1.01
SND1-214ENST00000489417 POU3F3P20264 500 aaPredicted RBP21.38■■□□□ 1.01
SND1-214ENST00000489417 ITGA8P53708 1063 aa21.38■■□□□ 1.01
SND1-214ENST00000489417 CAV1Q03135 178 aa21.38■■□□□ 1.01
SND1-214ENST00000489417 WASHC5Q12768 1159 aa21.38■■□□□ 1.01
SND1-214ENST00000489417 POLD3Q15054 466 aaPredicted RBP21.38■■□□□ 1.01
SND1-214ENST00000489417 GET4Q7L5D6 327 aaPredicted RBP21.38■■□□□ 1.01
SND1-214ENST00000489417 FBXO25Q8TCJ0 367 aa21.38■■□□□ 1.01
SND1-214ENST00000489417 SPATA13Q96N96 652 aa21.38■■□□□ 1.01
SND1-214ENST00000489417 ADAM7Q9H2U9 754 aa21.38■■□□□ 1.01
SND1-214ENST00000489417 CDH22Q9UJ99 828 aa21.38■■□□□ 1.01
SND1-214ENST00000489417 ANAPC5Q9UJX4 755 aa21.38■■□□□ 1.01
SND1-214ENST00000489417 TPX2Q9ULW0 747 aaKnown RBP21.38■■□□□ 1.01
SND1-214ENST00000489417 PDE4DIPQ5VU43 2346 aa21.38■■□□□ 1.01
SND1-214ENST00000489417 KCNK1O00180 336 aa21.38■■□□□ 1.01
Retrieved 100 of 20,778 RNA–protein pairs in 22.5 ms