RNA–Protein interactions for RNA: ENST00000489303.1

LMO4-203, Transcript of LIM domain only 4, humanhuman

TSL 2

Gene LMO4, Length 952 nt, Biotype processed transcript, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LMO4-203ENST00000489303 SYT12Q8IV01 421 aa13.91□□□□□ -0.18
LMO4-203ENST00000489303 EMC1Q8N766 993 aa13.91□□□□□ -0.18
LMO4-203ENST00000489303 ZNF366Q8N895 744 aa13.91□□□□□ -0.18
LMO4-203ENST00000489303 RXFP2Q8WXD0 754 aa13.91□□□□□ -0.18
LMO4-203ENST00000489303 FOXJ1Q92949 421 aa13.91□□□□□ -0.18
LMO4-203ENST00000489303 IGSF8Q969P0 613 aa13.91□□□□□ -0.18
LMO4-203ENST00000489303 C1orf74Q96LT6 269 aa13.91□□□□□ -0.18
LMO4-203ENST00000489303 NAP1L5Q96NT1 182 aaPredicted RBP13.91□□□□□ -0.18
LMO4-203ENST00000489303 HAPLN3Q96S86 360 aa13.91□□□□□ -0.18
LMO4-203ENST00000489303 NUP58Q9BVL2 599 aa13.91□□□□□ -0.18
LMO4-203ENST00000489303 EDEM3Q9BZQ6 932 aa13.91□□□□□ -0.18
LMO4-203ENST00000489303 ANGPTL2Q9UKU9 493 aa13.91□□□□□ -0.18
LMO4-203ENST00000489303 ERVW-1Q9UQF0 538 aa13.91□□□□□ -0.18
LMO4-203ENST00000489303 ADAMTS9Q9P2N4 1935 aa13.91□□□□□ -0.18
LMO4-203ENST00000489303 LRRC53A6NM62 1247 aa13.9□□□□□ -0.18
LMO4-203ENST00000489303 DNTTP04053 509 aa13.9□□□□□ -0.18
LMO4-203ENST00000489303 ITPKAP23677 461 aa13.9□□□□□ -0.18
LMO4-203ENST00000489303 HOXD12P35452 270 aa13.9□□□□□ -0.18
LMO4-203ENST00000489303 GGCXP38435 758 aa13.9□□□□□ -0.18
LMO4-203ENST00000489303 PLK1P53350 603 aa13.9□□□□□ -0.18
LMO4-203ENST00000489303 COPAP53621 1224 aa13.9□□□□□ -0.18
LMO4-203ENST00000489303 GSCP56915 257 aaPredicted RBP13.9□□□□□ -0.18
LMO4-203ENST00000489303 UBASH3AP57075 661 aa13.9□□□□□ -0.18
LMO4-203ENST00000489303 FANCCQ00597 558 aa13.9□□□□□ -0.18
LMO4-203ENST00000489303 ZBTB16Q05516 673 aa13.9□□□□□ -0.18
LMO4-203ENST00000489303 ZNF33AQ06730 810 aa13.9□□□□□ -0.18
LMO4-203ENST00000489303 NR1I3Q14994 352 aa13.9□□□□□ -0.18
LMO4-203ENST00000489303 CDO1Q16878 200 aa13.9□□□□□ -0.18
LMO4-203ENST00000489303 UAP1L1Q3KQV9 507 aa13.9□□□□□ -0.18
LMO4-203ENST00000489303 TTC31Q49AM3 519 aaPredicted RBP13.9□□□□□ -0.18
LMO4-203ENST00000489303 SYCP2LQ5T4T6 812 aa13.9□□□□□ -0.18
LMO4-203ENST00000489303 SH3PXD2AQ5TCZ1 1133 aa13.9□□□□□ -0.18
LMO4-203ENST00000489303 ACAD10Q6JQN1 1059 aa13.9□□□□□ -0.18
LMO4-203ENST00000489303 DNAJC24Q6P3W2 148 aa13.9□□□□□ -0.18
LMO4-203ENST00000489303 FAM131BQ86XD5 332 aa13.9□□□□□ -0.18
LMO4-203ENST00000489303 C3orf20Q8ND61 904 aa13.9□□□□□ -0.18
LMO4-203ENST00000489303 BAP1Q92560 729 aa13.9□□□□□ -0.18
LMO4-203ENST00000489303 PRSS16Q9NQE7 514 aa13.9□□□□□ -0.18
LMO4-203ENST00000489303 USP36Q9P275 1121 aaKnown RBP13.9□□□□□ -0.18
LMO4-203ENST00000489303 SLC25A13Q9UJS0 675 aa13.9□□□□□ -0.18
LMO4-203ENST00000489303 INTS6Q9UL03 887 aaKnown RBP13.9□□□□□ -0.18
LMO4-203ENST00000489303 EDDM13A0A1B0GTR0 161 aa13.89□□□□□ -0.19
LMO4-203ENST00000489303 TARSL2A2RTX5 802 aaKnown RBP13.89□□□□□ -0.19
LMO4-203ENST00000489303 C2CD4BA6NLJ0 364 aa13.89□□□□□ -0.19
LMO4-203ENST00000489303 SRGAP2O75044 1071 aa13.89□□□□□ -0.19
LMO4-203ENST00000489303 ENDOD1O94919 500 aa13.89□□□□□ -0.19
LMO4-203ENST00000489303 TPM3P06753 285 aa13.89□□□□□ -0.19
LMO4-203ENST00000489303 RHOCP08134 193 aa13.89□□□□□ -0.19
LMO4-203ENST00000489303 GPD1P21695 349 aa13.89□□□□□ -0.19
LMO4-203ENST00000489303 PTPN9P43378 593 aa13.89□□□□□ -0.19
LMO4-203ENST00000489303 MAPK8P45983 427 aa13.89□□□□□ -0.19
LMO4-203ENST00000489303 TPMTP51580 245 aa13.89□□□□□ -0.19
LMO4-203ENST00000489303 KRT83P78385 493 aa13.89□□□□□ -0.19
LMO4-203ENST00000489303 PTP4A2Q12974 167 aa13.89□□□□□ -0.19
LMO4-203ENST00000489303 HNRNPA1L2Q32P51 320 aaKnown RBP13.89□□□□□ -0.19
LMO4-203ENST00000489303 CCDC14Q49A88 953 aa13.89□□□□□ -0.19
LMO4-203ENST00000489303 C5orf22Q49AR2 442 aa13.89□□□□□ -0.19
LMO4-203ENST00000489303 TRIM61Q5EBN2 209 aa13.89□□□□□ -0.19
LMO4-203ENST00000489303 WDR45BQ5MNZ6 344 aa13.89□□□□□ -0.19
LMO4-203ENST00000489303 C6orf118Q5T5N4 469 aa13.89□□□□□ -0.19
LMO4-203ENST00000489303 ZNF776Q68DI1 518 aaPredicted RBP13.89□□□□□ -0.19
LMO4-203ENST00000489303 STRADAQ7RTN6 431 aa13.89□□□□□ -0.19
LMO4-203ENST00000489303 IRF2BP2Q7Z5L9 587 aa13.89□□□□□ -0.19
LMO4-203ENST00000489303 C14orf80Q86SX3 495 aa13.89□□□□□ -0.19
LMO4-203ENST00000489303 CACUL1Q86Y37 369 aa13.89□□□□□ -0.19
LMO4-203ENST00000489303 RGL4Q8IZJ4 473 aa13.89□□□□□ -0.19
LMO4-203ENST00000489303 APCDD1Q8J025 514 aa13.89□□□□□ -0.19
LMO4-203ENST00000489303 OR2I1PQ8NGU4 316 aa13.89□□□□□ -0.19
LMO4-203ENST00000489303 CEP76Q8TAP6 659 aa13.89□□□□□ -0.19
LMO4-203ENST00000489303 IQCDQ96DY2 449 aa13.89□□□□□ -0.19
LMO4-203ENST00000489303 TOE1Q96GM8 510 aaKnown RBP13.89□□□□□ -0.19
LMO4-203ENST00000489303 NUSAP1Q9BXS6 441 aaKnown RBP13.89□□□□□ -0.19
LMO4-203ENST00000489303 ADAM33Q9BZ11 813 aa13.89□□□□□ -0.19
LMO4-203ENST00000489303 MUC3BQ9H195 1237 aa13.89□□□□□ -0.19
LMO4-203ENST00000489303 TMEM9BQ9NQ34 198 aa13.89□□□□□ -0.19
LMO4-203ENST00000489303 WSB2Q9NYS7 404 aaPredicted RBP13.89□□□□□ -0.19
LMO4-203ENST00000489303 VPS28Q9UK41 221 aa13.89□□□□□ -0.19
LMO4-203ENST00000489303 SCML1Q9UN30 329 aa13.89□□□□□ -0.19
LMO4-203ENST00000489303 NCKAP1Q9Y2A7 1128 aa13.89□□□□□ -0.19
LMO4-203ENST00000489303 CEP192Q8TEP8 1941 aa13.89□□□□□ -0.19
LMO4-203ENST00000489303 GON4LQ3T8J9 2241 aa13.88□□□□□ -0.19
LMO4-203ENST00000489303 PLXND1Q9Y4D7 1925 aa13.88□□□□□ -0.19
LMO4-203ENST00000489303 ASPMQ8IZT6 3477 aa13.88□□□□□ -0.19
LMO4-203ENST00000489303 SIGLEC16A6NMB1 481 aa13.88□□□□□ -0.19
LMO4-203ENST00000489303 DRGXA6NNA5 263 aa13.88□□□□□ -0.19
LMO4-203ENST00000489303 MEI4A8MW99 385 aa13.88□□□□□ -0.19
LMO4-203ENST00000489303 C1QTNF9BB2RNN3 333 aa13.88□□□□□ -0.19
LMO4-203ENST00000489303 E9PAM4 449 aa13.88□□□□□ -0.19
LMO4-203ENST00000489303 C1QTNF9P0C862 333 aa13.88□□□□□ -0.19
LMO4-203ENST00000489303 MZF1P28698 734 aaPredicted RBP13.88□□□□□ -0.19
LMO4-203ENST00000489303 CTSOP43234 321 aaPredicted RBP13.88□□□□□ -0.19
LMO4-203ENST00000489303 KLHL30Q0D2K2 578 aa13.88□□□□□ -0.19
LMO4-203ENST00000489303 FOXC1Q12948 553 aa13.88□□□□□ -0.19
LMO4-203ENST00000489303 ARID5BQ14865 1188 aa13.88□□□□□ -0.19
LMO4-203ENST00000489303 C15orf59Q2T9L4 293 aaPredicted RBP13.88□□□□□ -0.19
LMO4-203ENST00000489303 FIGNQ5HY92 759 aa13.88□□□□□ -0.19
LMO4-203ENST00000489303 CXorf57Q6NSI4 855 aaKnown RBP13.88□□□□□ -0.19
LMO4-203ENST00000489303 TRNP1Q6NT89 227 aa13.88□□□□□ -0.19
LMO4-203ENST00000489303 DCUN1D2Q6PH85 259 aa13.88□□□□□ -0.19
LMO4-203ENST00000489303 MON1BQ7L1V2 547 aa13.88□□□□□ -0.19
Retrieved 100 of 20,778 RNA–protein pairs in 21.7 ms