RNA–Protein interactions for RNA: ENST00000489180.6

NPHP4-209, Transcript of nephrocystin 4, humanhuman

TSL 2

Gene NPHP4, Length 5,548 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NPHP4-209ENST00000489180 ZNF280DQ6N043 979 aa17.92■□□□□ 0.46
NPHP4-209ENST00000489180 REPS2Q8NFH8 660 aa17.92■□□□□ 0.46
NPHP4-209ENST00000489180 ANKRD49Q8WVL7 239 aa17.92■□□□□ 0.46
NPHP4-209ENST00000489180 CENPTQ96BT3 561 aa17.92■□□□□ 0.46
NPHP4-209ENST00000489180 RNFT2Q96EX2 444 aa17.92■□□□□ 0.46
NPHP4-209ENST00000489180 SMPD4Q9NXE4 827 aa17.92■□□□□ 0.46
NPHP4-209ENST00000489180 ASTN1O14525 1302 aa17.92■□□□□ 0.46
NPHP4-209ENST00000489180 KLRC4O43908 158 aa17.92■□□□□ 0.46
NPHP4-209ENST00000489180 UNC5CO95185 931 aa17.92■□□□□ 0.46
NPHP4-209ENST00000489180 FGFR1P11362 822 aa17.92■□□□□ 0.46
NPHP4-209ENST00000489180 COX10Q12887 443 aa17.92■□□□□ 0.46
NPHP4-209ENST00000489180 TMEM132BQ14DG7 1078 aa17.92■□□□□ 0.46
NPHP4-209ENST00000489180 SAMD4BQ5PRF9 694 aaKnown RBP17.92■□□□□ 0.46
NPHP4-209ENST00000489180 C1orf186Q6ZWK4 172 aa17.92■□□□□ 0.46
NPHP4-209ENST00000489180 PRKD2Q9BZL6 878 aa17.92■□□□□ 0.46
NPHP4-209ENST00000489180 ALG9Q9H6U8 611 aa17.92■□□□□ 0.46
NPHP4-209ENST00000489180 PXDNQ92626 1479 aa17.92■□□□□ 0.46
NPHP4-209ENST00000489180 HACD1B0YJ81 288 aa17.91■□□□□ 0.46
NPHP4-209ENST00000489180 MSH3P20585 1137 aa17.91■□□□□ 0.46
NPHP4-209ENST00000489180 CDK7P50613 346 aa17.91■□□□□ 0.46
NPHP4-209ENST00000489180 FCGRTP55899 365 aa17.91■□□□□ 0.46
NPHP4-209ENST00000489180 SLC45A4Q5BKX6 768 aa17.91■□□□□ 0.46
NPHP4-209ENST00000489180 FGD3Q5JSP0 725 aa17.91■□□□□ 0.46
NPHP4-209ENST00000489180 TRMT11Q7Z4G4 463 aaKnown RBP17.91■□□□□ 0.46
NPHP4-209ENST00000489180 UXS1Q8NBZ7 420 aa17.91■□□□□ 0.46
NPHP4-209ENST00000489180 ASZ1Q8WWH4 475 aa17.91■□□□□ 0.46
NPHP4-209ENST00000489180 SMARCD1Q96GM5 515 aa17.91■□□□□ 0.46
NPHP4-209ENST00000489180 TSEN34Q9BSV6 310 aaKnown RBP17.91■□□□□ 0.46
NPHP4-209ENST00000489180 C9orf16Q9BUW7 83 aa17.91■□□□□ 0.46
NPHP4-209ENST00000489180 SPACA6W5XKT8 324 aa17.91■□□□□ 0.46
NPHP4-209ENST00000489180 CYP1A2P05177 515 aa17.91■□□□□ 0.46
NPHP4-209ENST00000489180 TALDO1P37837 337 aa17.91■□□□□ 0.46
NPHP4-209ENST00000489180 PRKAA2P54646 552 aa17.91■□□□□ 0.46
NPHP4-209ENST00000489180 CSNK2BP67870 215 aa17.91■□□□□ 0.46
NPHP4-209ENST00000489180 DGCR6Q14129 220 aa17.91■□□□□ 0.46
NPHP4-209ENST00000489180 FBXO30Q8TB52 745 aa17.91■□□□□ 0.46
NPHP4-209ENST00000489180 SLC25A23Q9BV35 468 aa17.91■□□□□ 0.46
NPHP4-209ENST00000489180 TBC1D10AQ9BXI6 508 aa17.91■□□□□ 0.46
NPHP4-209ENST00000489180 MRPS26Q9BYN8 205 aaKnown RBP17.91■□□□□ 0.46
NPHP4-209ENST00000489180 SPON1Q9HCB6 807 aa17.91■□□□□ 0.46
NPHP4-209ENST00000489180 CPA4Q9UI42 421 aa17.91■□□□□ 0.46
NPHP4-209ENST00000489180 FZD1Q9UP38 647 aa17.91■□□□□ 0.46
NPHP4-209ENST00000489180 FAM50BQ9Y247 325 aa17.91■□□□□ 0.46
NPHP4-209ENST00000489180 NWD1Q149M9 1564 aa17.91■□□□□ 0.46
NPHP4-209ENST00000489180 ITSN1Q15811 1721 aa17.91■□□□□ 0.46
NPHP4-209ENST00000489180 ASNA1O43681 348 aa17.91■□□□□ 0.46
NPHP4-209ENST00000489180 CNTN2Q02246 1040 aa17.91■□□□□ 0.46
NPHP4-209ENST00000489180 MAD2L1Q13257 205 aaPredicted RBP17.91■□□□□ 0.46
NPHP4-209ENST00000489180 SHROOM1Q2M3G4 852 aaPredicted RBP17.91■□□□□ 0.46
NPHP4-209ENST00000489180 ERLEC1Q96DZ1 483 aa17.91■□□□□ 0.46
NPHP4-209ENST00000489180 UGT2B28Q9BY64 529 aa17.91■□□□□ 0.46
NPHP4-209ENST00000489180 C2CD2Q9Y426 696 aa17.91■□□□□ 0.46
NPHP4-209ENST00000489180 PCDHA11Q9Y5I1 949 aa17.91■□□□□ 0.46
NPHP4-209ENST00000489180 H3BN98 237 aa17.91■□□□□ 0.46
NPHP4-209ENST00000489180 GRK3P35626 688 aa17.91■□□□□ 0.46
NPHP4-209ENST00000489180 FLT3P36888 993 aa17.91■□□□□ 0.46
NPHP4-209ENST00000489180 ADARP55265 1226 aaKnown RBP17.91■□□□□ 0.46
NPHP4-209ENST00000489180 SLC27A1Q6PCB7 646 aa17.91■□□□□ 0.46
NPHP4-209ENST00000489180 CASP12Q6UXS9 341 aa17.91■□□□□ 0.46
NPHP4-209ENST00000489180 C16orf59Q7L2K0 433 aa17.91■□□□□ 0.46
NPHP4-209ENST00000489180 SVOPQ8N4V2 548 aa17.91■□□□□ 0.46
NPHP4-209ENST00000489180 SPATA20Q8TB22 786 aa17.91■□□□□ 0.46
NPHP4-209ENST00000489180 SERHL2Q9H4I8 314 aa17.91■□□□□ 0.46
NPHP4-209ENST00000489180 SERHLQ9NQF3 203 aa17.91■□□□□ 0.46
NPHP4-209ENST00000489180 ACKR2O00590 384 aa17.91■□□□□ 0.46
NPHP4-209ENST00000489180 PDZK1Q5T2W1 519 aa17.91■□□□□ 0.46
NPHP4-209ENST00000489180 LGI2Q8N0V4 545 aa17.91■□□□□ 0.46
NPHP4-209ENST00000489180 APOL4Q9BPW4 351 aa17.91■□□□□ 0.46
NPHP4-209ENST00000489180 KPNA4O00629 521 aaPredicted RBP17.9■□□□□ 0.46
NPHP4-209ENST00000489180 CYP2A7P20853 494 aa17.9■□□□□ 0.46
NPHP4-209ENST00000489180 FRG1Q14331 258 aaKnown RBP17.9■□□□□ 0.46
NPHP4-209ENST00000489180 ACAP1Q15027 740 aa17.9■□□□□ 0.46
NPHP4-209ENST00000489180 LRRC55Q6ZSA7 311 aa17.9■□□□□ 0.46
NPHP4-209ENST00000489180 EXOC3L1Q86VI1 746 aa17.9■□□□□ 0.46
NPHP4-209ENST00000489180 DPP10Q8N608 796 aa17.9■□□□□ 0.46
NPHP4-209ENST00000489180 WDR36Q8NI36 951 aaKnown RBP17.9■□□□□ 0.46
NPHP4-209ENST00000489180 MAGEE2Q8TD90 523 aaPredicted RBP17.9■□□□□ 0.46
NPHP4-209ENST00000489180 ENTPD7Q9NQZ7 604 aa17.9■□□□□ 0.46
NPHP4-209ENST00000489180 KCNQ5Q9NR82 932 aa17.9■□□□□ 0.46
NPHP4-209ENST00000489180 STK39Q9UEW8 545 aa17.9■□□□□ 0.46
NPHP4-209ENST00000489180 TDRKHQ9Y2W6 561 aaKnown RBP17.9■□□□□ 0.46
NPHP4-209ENST00000489180 SESN1Q9Y6P5 492 aa17.9■□□□□ 0.46
NPHP4-209ENST00000489180 SLIT1O75093 1534 aa17.9■□□□□ 0.46
NPHP4-209ENST00000489180 WTIPA6NIX2 430 aaPredicted RBP17.9■□□□□ 0.46
NPHP4-209ENST00000489180 BUD23O43709 281 aaKnown RBP17.9■□□□□ 0.46
NPHP4-209ENST00000489180 DRD4P21917 467 aa17.9■□□□□ 0.46
NPHP4-209ENST00000489180 PRKCIP41743 596 aa17.9■□□□□ 0.46
NPHP4-209ENST00000489180 NEK3P51956 506 aa17.9■□□□□ 0.46
NPHP4-209ENST00000489180 TRIQKQ629K1 86 aa17.9■□□□□ 0.46
NPHP4-209ENST00000489180 ZNF621Q6ZSS3 439 aa17.9■□□□□ 0.46
NPHP4-209ENST00000489180 SAPCD2Q86UD0 394 aa17.9■□□□□ 0.46
NPHP4-209ENST00000489180 ALLCQ8N6M5 410 aa17.9■□□□□ 0.46
NPHP4-209ENST00000489180 ART4Q93070 314 aa17.9■□□□□ 0.46
NPHP4-209ENST00000489180 VMP1Q96GC9 406 aa17.9■□□□□ 0.46
NPHP4-209ENST00000489180 MBOAT7Q96N66 472 aa17.9■□□□□ 0.46
NPHP4-209ENST00000489180 TMEM106CQ9BVX2 250 aa17.9■□□□□ 0.46
NPHP4-209ENST00000489180 KLHL1Q9NR64 748 aa17.9■□□□□ 0.46
NPHP4-209ENST00000489180 PCYOX1Q9UHG3 505 aa17.9■□□□□ 0.46
NPHP4-209ENST00000489180 PIK3C2BO00750 1634 aa17.9■□□□□ 0.46
NPHP4-209ENST00000489180 A0A087X1B8 175 aa17.9■□□□□ 0.46
Retrieved 100 of 20,778 RNA–protein pairs in 39.2 ms