RNA–Protein interactions for RNA: ENST00000489045.5

COL9A3-213, Transcript of collagen type IX alpha 3 chain, humanhuman

TSL 5

Gene COL9A3, Length 838 nt, Biotype processed transcript, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL9A3-213ENST00000489045 NAA35Q5VZE5 725 aa23.7■■□□□ 1.38
COL9A3-213ENST00000489045 USP30Q70CQ3 517 aa23.7■■□□□ 1.38
COL9A3-213ENST00000489045 C14orf80Q86SX3 495 aa23.7■■□□□ 1.38
COL9A3-213ENST00000489045 MMAAQ8IVH4 418 aaKnown RBP23.7■■□□□ 1.38
COL9A3-213ENST00000489045 GANCQ8TET4 914 aa23.7■■□□□ 1.38
COL9A3-213ENST00000489045 SLC20A1Q8WUM9 679 aa23.7■■□□□ 1.38
COL9A3-213ENST00000489045 TKTL2Q9H0I9 626 aa23.7■■□□□ 1.38
COL9A3-213ENST00000489045 WDCPQ9H6R7 721 aa23.7■■□□□ 1.38
COL9A3-213ENST00000489045 FAM207AQ9NSI2 230 aaPredicted RBP23.7■■□□□ 1.38
COL9A3-213ENST00000489045 ANO10Q9NW15 660 aa23.7■■□□□ 1.38
COL9A3-213ENST00000489045 FBXL12Q9NXK8 326 aa23.7■■□□□ 1.38
COL9A3-213ENST00000489045 ARHGEF38Q9NXL2 777 aa23.7■■□□□ 1.38
COL9A3-213ENST00000489045 SERGEFQ9UGK8 458 aa23.7■■□□□ 1.38
COL9A3-213ENST00000489045 NCKAP1Q9Y2A7 1128 aa23.7■■□□□ 1.38
COL9A3-213ENST00000489045 DOCK4Q8N1I0 1966 aa23.69■■□□□ 1.38
COL9A3-213ENST00000489045 GOLGA8SH3BPF8 625 aa23.69■■□□□ 1.38
COL9A3-213ENST00000489045 MID1O15344 667 aa23.69■■□□□ 1.38
COL9A3-213ENST00000489045 GJB3O75712 270 aa23.69■■□□□ 1.38
COL9A3-213ENST00000489045 GFPT2O94808 682 aa23.69■■□□□ 1.38
COL9A3-213ENST00000489045 CXCR3P49682 368 aa23.69■■□□□ 1.38
COL9A3-213ENST00000489045 PLK1P53350 603 aa23.69■■□□□ 1.38
COL9A3-213ENST00000489045 DEUP1Q05D60 604 aa23.69■■□□□ 1.38
COL9A3-213ENST00000489045 SULT2A1Q06520 285 aa23.69■■□□□ 1.38
COL9A3-213ENST00000489045 FOXC1Q12948 553 aa23.69■■□□□ 1.38
COL9A3-213ENST00000489045 SND1Q7KZF4 910 aaKnown RBP eCLIP23.69■■□□□ 1.387e-18■■■□□ 16.2
COL9A3-213ENST00000489045 MSANTD4Q8NCY6 345 aa23.69■■□□□ 1.38
COL9A3-213ENST00000489045 OR52K2Q8NGK3 314 aa23.69■■□□□ 1.38
COL9A3-213ENST00000489045 CPA5Q8WXQ8 436 aa23.69■■□□□ 1.38
COL9A3-213ENST00000489045 NT5C3BQ969T7 300 aa23.69■■□□□ 1.38
COL9A3-213ENST00000489045 PGAP3Q96FM1 320 aaPredicted RBP23.69■■□□□ 1.38
COL9A3-213ENST00000489045 TBCBQ99426 244 aa23.69■■□□□ 1.38
COL9A3-213ENST00000489045 ANLNQ9NQW6 1124 aa23.69■■□□□ 1.38
COL9A3-213ENST00000489045 NOCTQ9UK39 431 aaKnown RBP23.69■■□□□ 1.38
COL9A3-213ENST00000489045 ZNF559-ZNF177A0A0A6YYI6 481 aaPredicted RBP23.68■■□□□ 1.38
COL9A3-213ENST00000489045 I6L893 689 aaPredicted RBP23.68■■□□□ 1.38
COL9A3-213ENST00000489045 EPHB6O15197 1021 aa23.68■■□□□ 1.38
COL9A3-213ENST00000489045 FSBPO95073 299 aa23.68■■□□□ 1.38
COL9A3-213ENST00000489045 FLT3P36888 993 aa23.68■■□□□ 1.38
COL9A3-213ENST00000489045 NNMTP40261 264 aa23.68■■□□□ 1.38
COL9A3-213ENST00000489045 PSMD8P48556 350 aa23.68■■□□□ 1.38
COL9A3-213ENST00000489045 COPB1P53618 953 aaKnown RBP23.68■■□□□ 1.38
COL9A3-213ENST00000489045 BNC1Q01954 994 aa23.68■■□□□ 1.38
COL9A3-213ENST00000489045 MYL5Q02045 173 aa23.68■■□□□ 1.38
COL9A3-213ENST00000489045 ZNF177Q13360 481 aaPredicted RBP23.68■■□□□ 1.38
COL9A3-213ENST00000489045 STX1AQ16623 288 aa23.68■■□□□ 1.38
COL9A3-213ENST00000489045 SLC25A52Q3SY17 297 aa23.68■■□□□ 1.38
COL9A3-213ENST00000489045 C5orf22Q49AR2 442 aa23.68■■□□□ 1.38
COL9A3-213ENST00000489045 ZNF677Q86XU0 584 aa23.68■■□□□ 1.38
COL9A3-213ENST00000489045 STK40Q8N2I9 435 aa23.68■■□□□ 1.38
COL9A3-213ENST00000489045 PTPRN2Q92932 1015 aa23.68■■□□□ 1.38
COL9A3-213ENST00000489045 BIRC7Q96CA5 298 aa23.68■■□□□ 1.38
COL9A3-213ENST00000489045 ALG14Q96F25 216 aa23.68■■□□□ 1.38
COL9A3-213ENST00000489045 FAM129BQ96TA1 746 aa23.68■■□□□ 1.38
COL9A3-213ENST00000489045 NLRC4Q9NPP4 1024 aa23.68■■□□□ 1.38
COL9A3-213ENST00000489045 KMT2BQ9UMN6 2715 aaPredicted RBP23.68■■□□□ 1.38
COL9A3-213ENST00000489045 SPAARA0A1B0GVQ0 90 aa23.67■■□□□ 1.38
COL9A3-213ENST00000489045 A0A1W2PP55 124 aa23.67■■□□□ 1.38
COL9A3-213ENST00000489045 CLDN11O75508 207 aa23.67■■□□□ 1.38
COL9A3-213ENST00000489045 F9P00740 461 aa23.67■■□□□ 1.38
COL9A3-213ENST00000489045 VAV1P15498 845 aa23.67■■□□□ 1.38
COL9A3-213ENST00000489045 JAM2P57087 298 aa23.67■■□□□ 1.38
COL9A3-213ENST00000489045 SFSWAPQ12872 951 aaKnown RBP23.67■■□□□ 1.38
COL9A3-213ENST00000489045 SLC14A1Q13336 389 aa23.67■■□□□ 1.38
COL9A3-213ENST00000489045 TRNP1Q6NT89 227 aa23.67■■□□□ 1.38
COL9A3-213ENST00000489045 FEM1AQ9BSK4 669 aa23.67■■□□□ 1.38
COL9A3-213ENST00000489045 SIK3Q9Y2K2 1263 aa23.67■■□□□ 1.38
COL9A3-213ENST00000489045 PAXBP1Q9Y5B6 917 aa23.67■■□□□ 1.38
COL9A3-213ENST00000489045 SNX10Q9Y5X0 201 aa23.67■■□□□ 1.38
COL9A3-213ENST00000489045 A0A1B0GVT2 93 aa23.66■■□□□ 1.38
COL9A3-213ENST00000489045 RNASEH2AO75792 299 aaKnown RBP23.66■■□□□ 1.38
COL9A3-213ENST00000489045 SLC8A1P32418 973 aa23.66■■□□□ 1.38
COL9A3-213ENST00000489045 SOX5P35711 763 aa23.66■■□□□ 1.38
COL9A3-213ENST00000489045 CSNK1EP49674 416 aaKnown RBP23.66■■□□□ 1.38
COL9A3-213ENST00000489045 AFF3P51826 1226 aaKnown RBP23.66■■□□□ 1.38
COL9A3-213ENST00000489045 CDH4P55283 916 aa23.66■■□□□ 1.38
COL9A3-213ENST00000489045 SIM1P81133 766 aaPredicted RBP23.66■■□□□ 1.38
COL9A3-213ENST00000489045 CDR2Q01850 454 aa23.66■■□□□ 1.38
COL9A3-213ENST00000489045 FRS2Q8WU20 508 aa23.66■■□□□ 1.38
COL9A3-213ENST00000489045 SPAG5Q96R06 1193 aa23.66■■□□□ 1.38
COL9A3-213ENST00000489045 PPP1R9BQ96SB3 815 aa23.66■■□□□ 1.38
COL9A3-213ENST00000489045 OMDQ99983 421 aa23.66■■□□□ 1.38
COL9A3-213ENST00000489045 NEUROG2Q9H2A3 272 aa23.66■■□□□ 1.38
COL9A3-213ENST00000489045 IL21RQ9HBE5 538 aa23.66■■□□□ 1.38
COL9A3-213ENST00000489045 TM9SF3Q9HD45 589 aa23.66■■□□□ 1.38
COL9A3-213ENST00000489045 TMPRSS4Q9NRS4 437 aa23.66■■□□□ 1.38
COL9A3-213ENST00000489045 LIMA1Q9UHB6 759 aaKnown RBP23.66■■□□□ 1.38
COL9A3-213ENST00000489045 SLC25A13Q9UJS0 675 aa23.66■■□□□ 1.38
COL9A3-213ENST00000489045 TMEM59LQ9UK28 342 aa23.66■■□□□ 1.38
COL9A3-213ENST00000489045 VPS28Q9UK41 221 aa23.66■■□□□ 1.38
COL9A3-213ENST00000489045 OR51B4Q9Y5P0 310 aa23.66■■□□□ 1.38
COL9A3-213ENST00000489045 USP24Q9UPU5 2620 aa23.66■■□□□ 1.38
COL9A3-213ENST00000489045 KNL1Q8NG31 2342 aa23.66■■□□□ 1.38
COL9A3-213ENST00000489045 CACNA1BQ00975 2339 aa23.65■■□□□ 1.38
COL9A3-213ENST00000489045 FAM47DPA6NHR8 397 aa23.65■■□□□ 1.38
COL9A3-213ENST00000489045 CNTN5O94779 1100 aa23.65■■□□□ 1.38
COL9A3-213ENST00000489045 CER1O95813 267 aa23.65■■□□□ 1.38
COL9A3-213ENST00000489045 TOP3BO95985 862 aaKnown RBP23.65■■□□□ 1.38
COL9A3-213ENST00000489045 ADH1BP00325 375 aa23.65■■□□□ 1.38
COL9A3-213ENST00000489045 IGHV4-34P06331 123 aa23.65■■□□□ 1.38
COL9A3-213ENST00000489045 CHRNB2P17787 502 aa23.65■■□□□ 1.38
Retrieved 100 of 20,778 RNA–protein pairs in 44.6 ms