RNA–Protein interactions for RNA: ENST00000488753.1

ATPAF2-207, Transcript of ATP synthase mitochondrial F1 complex assembly factor 2, humanhuman

TSL 3

Gene ATPAF2, Length 796 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ATPAF2-207ENST00000488753 RAB44Q7Z6P3 723 aaPredicted RBP13.47□□□□□ -0.25
ATPAF2-207ENST00000488753 MMAAQ8IVH4 418 aaKnown RBP13.47□□□□□ -0.25
ATPAF2-207ENST00000488753 OR2T34Q8NGX1 318 aa13.47□□□□□ -0.25
ATPAF2-207ENST00000488753 GANCQ8TET4 914 aa13.47□□□□□ -0.25
ATPAF2-207ENST00000488753 PTPRN2Q92932 1015 aa13.47□□□□□ -0.25
ATPAF2-207ENST00000488753 IGSF8Q969P0 613 aa13.47□□□□□ -0.25
ATPAF2-207ENST00000488753 PGAP3Q96FM1 320 aaPredicted RBP13.47□□□□□ -0.25
ATPAF2-207ENST00000488753 CAMK1GQ96NX5 476 aa13.47□□□□□ -0.25
ATPAF2-207ENST00000488753 FAM129BQ96TA1 746 aa13.47□□□□□ -0.25
ATPAF2-207ENST00000488753 ORAI3Q9BRQ5 295 aa13.47□□□□□ -0.25
ATPAF2-207ENST00000488753 NUP62CLQ9H1M0 184 aa13.47□□□□□ -0.25
ATPAF2-207ENST00000488753 IL21RQ9HBE5 538 aa13.47□□□□□ -0.25
ATPAF2-207ENST00000488753 SLCO3A1Q9UIG8 710 aa13.47□□□□□ -0.25
ATPAF2-207ENST00000488753 PCOLCE2Q9UKZ9 415 aa13.47□□□□□ -0.25
ATPAF2-207ENST00000488753 STAP1Q9ULZ2 295 aa13.47□□□□□ -0.25
ATPAF2-207ENST00000488753 ANKRD6Q9Y2G4 727 aa13.47□□□□□ -0.25
ATPAF2-207ENST00000488753 FNDC3AQ9Y2H6 1198 aaKnown RBP13.47□□□□□ -0.25
ATPAF2-207ENST00000488753 PAXBP1Q9Y5B6 917 aa13.47□□□□□ -0.25
ATPAF2-207ENST00000488753 SYNJ2BP-COX16A0A087WUM0 186 aa13.46□□□□□ -0.25
ATPAF2-207ENST00000488753 A0A1W2PP55 124 aa13.46□□□□□ -0.25
ATPAF2-207ENST00000488753 A0A1W2PPC4 97 aa13.46□□□□□ -0.25
ATPAF2-207ENST00000488753 M0QYT0 321 aa13.46□□□□□ -0.25
ATPAF2-207ENST00000488753 VILLO15195 856 aa13.46□□□□□ -0.25
ATPAF2-207ENST00000488753 MID1O15344 667 aa13.46□□□□□ -0.25
ATPAF2-207ENST00000488753 DFNA5O60443 496 aa13.46□□□□□ -0.25
ATPAF2-207ENST00000488753 CLDN11O75508 207 aa13.46□□□□□ -0.25
ATPAF2-207ENST00000488753 GRAP2O75791 330 aa13.46□□□□□ -0.25
ATPAF2-207ENST00000488753 LSM8O95777 96 aaKnown RBP13.46□□□□□ -0.25
ATPAF2-207ENST00000488753 CYP11B1P15538 503 aa13.46□□□□□ -0.25
ATPAF2-207ENST00000488753 PDGFRAP16234 1089 aa13.46□□□□□ -0.25
ATPAF2-207ENST00000488753 GOT1P17174 413 aa13.46□□□□□ -0.25
ATPAF2-207ENST00000488753 MZF1P28698 734 aaPredicted RBP13.46□□□□□ -0.25
ATPAF2-207ENST00000488753 SLC8A1P32418 973 aa13.46□□□□□ -0.25
ATPAF2-207ENST00000488753 GABRB2P47870 512 aa13.46□□□□□ -0.25
ATPAF2-207ENST00000488753 GALCP54803 685 aa13.46□□□□□ -0.25
ATPAF2-207ENST00000488753 RACK1P63244 317 aaKnown RBP13.46□□□□□ -0.25
ATPAF2-207ENST00000488753 NME3Q13232 169 aa13.46□□□□□ -0.25
ATPAF2-207ENST00000488753 RAPGEF1Q13905 1077 aa13.46□□□□□ -0.25
ATPAF2-207ENST00000488753 KCNJ12Q14500 433 aa13.46□□□□□ -0.25
ATPAF2-207ENST00000488753 DRAP1Q14919 205 aaPredicted RBP13.46□□□□□ -0.25
ATPAF2-207ENST00000488753 KIF19Q2TAC6 998 aa13.46□□□□□ -0.25
ATPAF2-207ENST00000488753 KLHDC7AQ5VTJ3 777 aa13.46□□□□□ -0.25
ATPAF2-207ENST00000488753 NCEH1Q6PIU2 408 aa13.46□□□□□ -0.25
ATPAF2-207ENST00000488753 LRSAM1Q6UWE0 723 aa13.46□□□□□ -0.25
ATPAF2-207ENST00000488753 CLEC17AQ6ZS10 378 aa13.46□□□□□ -0.25
ATPAF2-207ENST00000488753 DSG4Q86SJ6 1040 aa13.46□□□□□ -0.25
ATPAF2-207ENST00000488753 FRS2Q8WU20 508 aa13.46□□□□□ -0.25
ATPAF2-207ENST00000488753 ADAMTS14Q8WXS8 1223 aa13.46□□□□□ -0.25
ATPAF2-207ENST00000488753 NT5C3BQ969T7 300 aa13.46□□□□□ -0.25
ATPAF2-207ENST00000488753 SKA1Q96BD8 255 aa13.46□□□□□ -0.25
ATPAF2-207ENST00000488753 ALG14Q96F25 216 aa13.46□□□□□ -0.25
ATPAF2-207ENST00000488753 RPL10LQ96L21 214 aaKnown RBP13.46□□□□□ -0.25
ATPAF2-207ENST00000488753 SPAG5Q96R06 1193 aa13.46□□□□□ -0.25
ATPAF2-207ENST00000488753 NPY6RQ99463 290 aa13.46□□□□□ -0.25
ATPAF2-207ENST00000488753 CDC6Q99741 560 aa13.46□□□□□ -0.25
ATPAF2-207ENST00000488753 OMDQ99983 421 aa13.46□□□□□ -0.25
ATPAF2-207ENST00000488753 NEUROG2Q9H2A3 272 aa13.46□□□□□ -0.25
ATPAF2-207ENST00000488753 ARHGEF38Q9NXL2 777 aa13.46□□□□□ -0.25
ATPAF2-207ENST00000488753 FASTKD2Q9NYY8 710 aaKnown RBP eCLIP13.46□□□□□ -0.25
ATPAF2-207ENST00000488753 COX16Q9P0S2 106 aa13.46□□□□□ -0.25
ATPAF2-207ENST00000488753 SERGEFQ9UGK8 458 aa13.46□□□□□ -0.25
ATPAF2-207ENST00000488753 APOBEC2Q9Y235 224 aaKnown RBP13.46□□□□□ -0.25
ATPAF2-207ENST00000488753 TBC1D30Q9Y2I9 924 aa13.46□□□□□ -0.25
ATPAF2-207ENST00000488753 HS3ST4Q9Y661 456 aa13.46□□□□□ -0.25
ATPAF2-207ENST00000488753 SLCO1B1Q9Y6L6 691 aa13.46□□□□□ -0.25
ATPAF2-207ENST00000488753 SPEGQ15772 3267 aa13.45□□□□□ -0.26
ATPAF2-207ENST00000488753 ZNF559-ZNF177A0A0A6YYI6 481 aaPredicted RBP13.45□□□□□ -0.26
ATPAF2-207ENST00000488753 SLC7A4O43246 635 aa13.45□□□□□ -0.26
ATPAF2-207ENST00000488753 ATP9BO43861 1147 aa13.45□□□□□ -0.26
ATPAF2-207ENST00000488753 PCDHGA12O60330 932 aa13.45□□□□□ -0.26
ATPAF2-207ENST00000488753 RNASEH2AO75792 299 aaKnown RBP13.45□□□□□ -0.26
ATPAF2-207ENST00000488753 FTH1P19P0C7X4 201 aa13.45□□□□□ -0.26
ATPAF2-207ENST00000488753 PNMA6AP0CW24 399 aaPredicted RBP13.45□□□□□ -0.26
ATPAF2-207ENST00000488753 UCHL3P15374 230 aa13.45□□□□□ -0.26
ATPAF2-207ENST00000488753 CXCR3P49682 368 aa13.45□□□□□ -0.26
ATPAF2-207ENST00000488753 STK19P49842 368 aaPredicted RBP13.45□□□□□ -0.26
ATPAF2-207ENST00000488753 CCR5P51681 352 aa13.45□□□□□ -0.26
ATPAF2-207ENST00000488753 KCNMA1Q12791 1236 aa13.45□□□□□ -0.26
ATPAF2-207ENST00000488753 ZNF177Q13360 481 aaPredicted RBP13.45□□□□□ -0.26
ATPAF2-207ENST00000488753 TCP11X2Q5H9J9 407 aa13.45□□□□□ -0.26
ATPAF2-207ENST00000488753 SND1Q7KZF4 910 aaKnown RBP eCLIP13.45□□□□□ -0.26
ATPAF2-207ENST00000488753 CIR1Q86X95 450 aaPredicted RBP13.45□□□□□ -0.26
ATPAF2-207ENST00000488753 STK40Q8N2I9 435 aa13.45□□□□□ -0.26
ATPAF2-207ENST00000488753 MSANTD4Q8NCY6 345 aa13.45□□□□□ -0.26
ATPAF2-207ENST00000488753 BAHD1Q8TBE0 780 aaPredicted RBP13.45□□□□□ -0.26
ATPAF2-207ENST00000488753 SETD7Q8WTS6 366 aaKnown RBP13.45□□□□□ -0.26
ATPAF2-207ENST00000488753 FAM131CQ96AQ9 280 aa13.45□□□□□ -0.26
ATPAF2-207ENST00000488753 C18orf8Q96DM3 657 aa13.45□□□□□ -0.26
ATPAF2-207ENST00000488753 FEM1AQ9BSK4 669 aa13.45□□□□□ -0.26
ATPAF2-207ENST00000488753 NAA15Q9BXJ9 866 aaKnown RBP13.45□□□□□ -0.26
ATPAF2-207ENST00000488753 ACE2Q9BYF1 805 aaPredicted RBP13.45□□□□□ -0.26
ATPAF2-207ENST00000488753 PDCL3Q9H2J4 239 aa13.45□□□□□ -0.26
ATPAF2-207ENST00000488753 KDM4CQ9H3R0 1056 aa13.45□□□□□ -0.26
ATPAF2-207ENST00000488753 WDCPQ9H6R7 721 aa13.45□□□□□ -0.26
ATPAF2-207ENST00000488753 PIGVQ9NUD9 493 aa13.45□□□□□ -0.26
ATPAF2-207ENST00000488753 VANGL2Q9ULK5 521 aa13.45□□□□□ -0.26
ATPAF2-207ENST00000488753 OR51B4Q9Y5P0 310 aa13.45□□□□□ -0.26
ATPAF2-207ENST00000488753 SNX11Q9Y5W9 270 aa13.45□□□□□ -0.26
ATPAF2-207ENST00000488753 FHOD1Q9Y613 1164 aa13.45□□□□□ -0.26
ATPAF2-207ENST00000488753 CFAP47Q6ZTR5 3102 aa13.45□□□□□ -0.26
Retrieved 100 of 20,778 RNA–protein pairs in 29 ms