RNA–Protein interactions for RNA: ENST00000488489.5

NECAB3-213, Transcript of N-terminal EF-hand calcium binding protein 3, humanhuman

TSL 2

Gene NECAB3, Length 2,142 nt, Biotype nonsense mediated decay.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NECAB3-213ENST00000488489 PIAS1O75925 651 aa20.72■□□□□ 0.91
NECAB3-213ENST00000488489 TWF1Q12792 350 aa20.72■□□□□ 0.91
NECAB3-213ENST00000488489 PARP6Q2NL67 630 aa20.72■□□□□ 0.91
NECAB3-213ENST00000488489 ALFQ53S48 1182 aa20.72■□□□□ 0.91
NECAB3-213ENST00000488489 RAP1GAP2Q684P5 730 aa20.72■□□□□ 0.91
NECAB3-213ENST00000488489 FBXL22Q6P050 247 aa20.72■□□□□ 0.91
NECAB3-213ENST00000488489 ZNF276Q8N554 614 aa20.72■□□□□ 0.91
NECAB3-213ENST00000488489 ATP11CQ8NB49 1132 aa20.72■□□□□ 0.91
NECAB3-213ENST00000488489 KLHL23Q8NBE8 558 aa20.72■□□□□ 0.91
NECAB3-213ENST00000488489 OVCA2Q8WZ82 227 aa20.72■□□□□ 0.91
NECAB3-213ENST00000488489 CLP1Q92989 425 aaKnown RBP20.72■□□□□ 0.91
NECAB3-213ENST00000488489 IGSF8Q969P0 613 aa20.72■□□□□ 0.91
NECAB3-213ENST00000488489 CABS1Q96KC9 395 aa20.72■□□□□ 0.91
NECAB3-213ENST00000488489 ZBED2Q9BTP6 218 aa20.72■□□□□ 0.91
NECAB3-213ENST00000488489 FRMD8Q9BZ67 464 aaPredicted RBP20.72■□□□□ 0.91
NECAB3-213ENST00000488489 ZBP1Q9H171 429 aa20.72■□□□□ 0.91
NECAB3-213ENST00000488489 CNOT10Q9H9A5 744 aaKnown RBP20.72■□□□□ 0.91
NECAB3-213ENST00000488489 KLHL8Q9P2G9 620 aaPredicted RBP20.72■□□□□ 0.91
NECAB3-213ENST00000488489 IGSF9Q9P2J2 1179 aa20.72■□□□□ 0.91
NECAB3-213ENST00000488489 RABGEF1Q9UJ41 708 aa20.72■□□□□ 0.91
NECAB3-213ENST00000488489 CDH23Q9H251 3354 aa20.72■□□□□ 0.91
NECAB3-213ENST00000488489 CHD9Q3L8U1 2897 aa20.71■□□□□ 0.91
NECAB3-213ENST00000488489 ZBTB24O43167 697 aaPredicted RBP20.71■□□□□ 0.91
NECAB3-213ENST00000488489 CNTN5O94779 1100 aa20.71■□□□□ 0.91
NECAB3-213ENST00000488489 AGTP01019 485 aa20.71■□□□□ 0.91
NECAB3-213ENST00000488489 CD68P34810 354 aaPredicted RBP20.71■□□□□ 0.91
NECAB3-213ENST00000488489 ATP5C1P36542 298 aaKnown RBP20.71■□□□□ 0.91
NECAB3-213ENST00000488489 AFMIDQ63HM1 303 aa20.71■□□□□ 0.91
NECAB3-213ENST00000488489 PALM2Q8IXS6 379 aa20.71■□□□□ 0.91
NECAB3-213ENST00000488489 TCEAL8Q8IYN2 117 aa20.71■□□□□ 0.91
NECAB3-213ENST00000488489 PDZD8Q8NEN9 1154 aa20.71■□□□□ 0.91
NECAB3-213ENST00000488489 MYEOVQ96EZ4 313 aa20.71■□□□□ 0.91
NECAB3-213ENST00000488489 AGAP3Q96P47 875 aa20.71■□□□□ 0.91
NECAB3-213ENST00000488489 PRMT1Q99873 361 aaKnown RBP20.71■□□□□ 0.91
NECAB3-213ENST00000488489 CCDC77Q9BR77 488 aa20.71■□□□□ 0.91
NECAB3-213ENST00000488489 NOL6Q9H6R4 1146 aaKnown RBP20.71■□□□□ 0.91
NECAB3-213ENST00000488489 FNIP2Q9P278 1114 aa20.71■□□□□ 0.91
NECAB3-213ENST00000488489 TBK1Q9UHD2 729 aa20.71■□□□□ 0.91
NECAB3-213ENST00000488489 DNMT3LQ9UJW3 386 aa20.71■□□□□ 0.91
NECAB3-213ENST00000488489 INSL6Q9Y581 213 aa20.71■□□□□ 0.91
NECAB3-213ENST00000488489 IGLV3-10A0A075B6K4 115 aa20.71■□□□□ 0.91
NECAB3-213ENST00000488489 GOLGA6L7A0A1B0GV03 622 aa20.71■□□□□ 0.91
NECAB3-213ENST00000488489 EXOC1LA0A1B0GW35 172 aa20.71■□□□□ 0.91
NECAB3-213ENST00000488489 WASH4PA8MWX3 477 aa20.71■□□□□ 0.91
NECAB3-213ENST00000488489 COCHO43405 550 aa20.71■□□□□ 0.91
NECAB3-213ENST00000488489 CNPP09543 421 aaKnown RBP20.71■□□□□ 0.91
NECAB3-213ENST00000488489 PLD1Q13393 1074 aa20.71■□□□□ 0.91
NECAB3-213ENST00000488489 TEX44Q53QW1 395 aa20.71■□□□□ 0.91
NECAB3-213ENST00000488489 NADSYN1Q6IA69 706 aa20.71■□□□□ 0.91
NECAB3-213ENST00000488489 TFAP2DQ7Z6R9 452 aa20.71■□□□□ 0.91
NECAB3-213ENST00000488489 DNAJB7Q7Z6W7 309 aaPredicted RBP20.71■□□□□ 0.91
NECAB3-213ENST00000488489 LZTR1Q8N653 840 aa20.71■□□□□ 0.91
NECAB3-213ENST00000488489 ZNF419Q96HQ0 510 aaPredicted RBP20.71■□□□□ 0.91
NECAB3-213ENST00000488489 PLAC1Q9HBJ0 212 aa20.71■□□□□ 0.91
NECAB3-213ENST00000488489 NYNRINQ9P2P1 1898 aaKnown RBP20.7■□□□□ 0.9
NECAB3-213ENST00000488489 LCHNA4D1U4 455 aa20.7■□□□□ 0.9
NECAB3-213ENST00000488489 MAFKO60675 156 aa20.7■□□□□ 0.9
NECAB3-213ENST00000488489 JCHAINP01591 159 aa20.7■□□□□ 0.9
NECAB3-213ENST00000488489 CTSAP10619 480 aa20.7■□□□□ 0.9
NECAB3-213ENST00000488489 QPCTQ16769 361 aa20.7■□□□□ 0.9
NECAB3-213ENST00000488489 HECTD3Q5T447 861 aa20.7■□□□□ 0.9
NECAB3-213ENST00000488489 MPP5Q8N3R9 675 aa20.7■□□□□ 0.9
NECAB3-213ENST00000488489 FBF1Q8TES7 1133 aa20.7■□□□□ 0.9
NECAB3-213ENST00000488489 TRMT2BQ96GJ1 504 aaKnown RBP20.7■□□□□ 0.9
NECAB3-213ENST00000488489 TSGA13Q96PP4 275 aa20.7■□□□□ 0.9
NECAB3-213ENST00000488489 RNF38Q9H0F5 515 aa20.7■□□□□ 0.9
NECAB3-213ENST00000488489 ACTR5Q9H9F9 607 aaPredicted RBP20.7■□□□□ 0.9
NECAB3-213ENST00000488489 RXFP1Q9HBX9 757 aa20.7■□□□□ 0.9
NECAB3-213ENST00000488489 PPARGC1AQ9UBK2 798 aaKnown RBP20.7■□□□□ 0.9
NECAB3-213ENST00000488489 INSL5Q9Y5Q6 135 aa20.7■□□□□ 0.9
NECAB3-213ENST00000488489 MTSS1O43312 755 aa20.69■□□□□ 0.9
NECAB3-213ENST00000488489 CDH16O75309 829 aa20.69■□□□□ 0.9
NECAB3-213ENST00000488489 SYN1P17600 705 aa20.69■□□□□ 0.9
NECAB3-213ENST00000488489 ELF1P32519 619 aa20.69■□□□□ 0.9
NECAB3-213ENST00000488489 EFTUD2Q15029 972 aaKnown RBP eCLIP20.69■□□□□ 0.96e-8■■■■□ 21
NECAB3-213ENST00000488489 CCDC121Q6ZUS5 278 aa20.69■□□□□ 0.9
NECAB3-213ENST00000488489 TMEM150AQ86TG1 271 aa20.69■□□□□ 0.9
NECAB3-213ENST00000488489 EXOC3L1Q86VI1 746 aa20.69■□□□□ 0.9
NECAB3-213ENST00000488489 C7orf61Q8IZ16 206 aa20.69■□□□□ 0.9
NECAB3-213ENST00000488489 CNTD1Q8N815 330 aa20.69■□□□□ 0.9
NECAB3-213ENST00000488489 SIGLEC10Q96LC7 697 aa20.69■□□□□ 0.9
NECAB3-213ENST00000488489 CDK5RAP1Q96SZ6 601 aaKnown RBP20.69■□□□□ 0.9
NECAB3-213ENST00000488489 ZYG11BQ9C0D3 744 aa20.69■□□□□ 0.9
NECAB3-213ENST00000488489 APOBEC3CQ9NRW3 190 aaKnown RBP eCLIP20.69■□□□□ 0.9
NECAB3-213ENST00000488489 TRPM5Q9NZQ8 1165 aa20.69■□□□□ 0.9
NECAB3-213ENST00000488489 LGALS13Q9UHV8 139 aa20.69■□□□□ 0.9
NECAB3-213ENST00000488489 HBS1LQ9Y450 684 aaKnown RBP20.69■□□□□ 0.9
NECAB3-213ENST00000488489 PLXNA4Q9HCM2 1894 aa20.69■□□□□ 0.9
NECAB3-213ENST00000488489 ANAPC1Q9H1A4 1944 aa20.69■□□□□ 0.9
NECAB3-213ENST00000488489 C2orf78A6NCI8 922 aa20.69■□□□□ 0.9
NECAB3-213ENST00000488489 POC1B-GALNT4F8VUJ3 575 aa20.69■□□□□ 0.9
NECAB3-213ENST00000488489 RHOQP17081 205 aa20.69■□□□□ 0.9
NECAB3-213ENST00000488489 CCNCP24863 283 aa20.69■□□□□ 0.9
NECAB3-213ENST00000488489 CA8P35219 290 aa20.69■□□□□ 0.9
NECAB3-213ENST00000488489 ZNF33AQ06730 810 aa20.69■□□□□ 0.9
NECAB3-213ENST00000488489 OLIG2Q13516 323 aa20.69■□□□□ 0.9
NECAB3-213ENST00000488489 TAF12Q16514 161 aa20.69■□□□□ 0.9
NECAB3-213ENST00000488489 HERC6Q8IVU3 1022 aa20.69■□□□□ 0.9
NECAB3-213ENST00000488489 ATPAF2Q8N5M1 289 aa20.69■□□□□ 0.9
NECAB3-213ENST00000488489 TEKT5Q96M29 485 aa20.69■□□□□ 0.9
Retrieved 100 of 20,778 RNA–protein pairs in 31.6 ms