RNA–Protein interactions for RNA: ENST00000488131.1

CDC42BPA-213, Transcript of CDC42 binding protein kinase alpha, human

TSL 5

Gene CDC42BPA, Length 1,859 nt, Biotype processed transcript, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
CDC42BPA-213	ENST00000488131	CRNN	Q9UBG3	495 aa	Predicted RBP	4.88	□□□□□ -1.63
CDC42BPA-213	ENST00000488131	ARPP21	Q9UBL0	812 aa	Predicted RBP	4.88	□□□□□ -1.63
CDC42BPA-213	ENST00000488131	SUSD2	Q9UGT4	822 aa		4.88	□□□□□ -1.63
CDC42BPA-213	ENST00000488131	PFDN2	Q9UHV9	154 aa		4.88	□□□□□ -1.63
CDC42BPA-213	ENST00000488131	PTBP2	Q9UKA9	531 aa	Known RBP	4.88	□□□□□ -1.63
CDC42BPA-213	ENST00000488131	APPL1	Q9UKG1	709 aa		4.88	□□□□□ -1.63
CDC42BPA-213	ENST00000488131	POMP	Q9Y244	141 aa		4.88	□□□□□ -1.63
CDC42BPA-213	ENST00000488131	PRELID1	Q9Y255	219 aa		4.88	□□□□□ -1.63
CDC42BPA-213	ENST00000488131	MYO3B	Q8WXR4	1341 aa		4.88	□□□□□ -1.63
CDC42BPA-213	ENST00000488131	LOC105371267	A0A1B0GV96	52 aa		4.88	□□□□□ -1.63
CDC42BPA-213	ENST00000488131	FAM237B	A0A1B0GVD1	139 aa		4.88	□□□□□ -1.63
CDC42BPA-213	ENST00000488131	GSTTP1	A0A1W2PQM5	241 aa		4.88	□□□□□ -1.63
CDC42BPA-213	ENST00000488131	ESYT2	A0FGR8	921 aa		4.88	□□□□□ -1.63
CDC42BPA-213	ENST00000488131	SDR42E2	A6NKP2	422 aa		4.88	□□□□□ -1.63
CDC42BPA-213	ENST00000488131	CENPBD1	B2RD01	187 aa		4.88	□□□□□ -1.63
CDC42BPA-213	ENST00000488131		H3BNH8	94 aa		4.88	□□□□□ -1.63
CDC42BPA-213	ENST00000488131	PSMD12	O00232	456 aa	Predicted RBP	4.88	□□□□□ -1.63
CDC42BPA-213	ENST00000488131	KPNA4	O00629	521 aa	Predicted RBP	4.88	□□□□□ -1.63
CDC42BPA-213	ENST00000488131	CLDN3	O15551	220 aa		4.88	□□□□□ -1.63
CDC42BPA-213	ENST00000488131	CCNT1	O60563	726 aa	Known RBP	4.88	□□□□□ -1.63
CDC42BPA-213	ENST00000488131	MTRF1	O75570	445 aa	Known RBP	4.88	□□□□□ -1.63
CDC42BPA-213	ENST00000488131	PDE8B	O95263	885 aa		4.88	□□□□□ -1.63
CDC42BPA-213	ENST00000488131	TGFB1	P01137	390 aa		4.88	□□□□□ -1.63
CDC42BPA-213	ENST00000488131	CYP1A2	P05177	515 aa		4.88	□□□□□ -1.63
CDC42BPA-213	ENST00000488131	NFIC	P08651	508 aa		4.88	□□□□□ -1.63
CDC42BPA-213	ENST00000488131	ALOX5	P09917	674 aa		4.88	□□□□□ -1.63
CDC42BPA-213	ENST00000488131	UBL4A	P11441	157 aa		4.88	□□□□□ -1.63
CDC42BPA-213	ENST00000488131	GZMA	P12544	262 aa		4.88	□□□□□ -1.63
CDC42BPA-213	ENST00000488131	TSHR	P16473	764 aa		4.88	□□□□□ -1.63
CDC42BPA-213	ENST00000488131	DCK	P27707	260 aa		4.88	□□□□□ -1.63
CDC42BPA-213	ENST00000488131	GABRB3	P28472	473 aa		4.88	□□□□□ -1.63
CDC42BPA-213	ENST00000488131	L1CAM	P32004	1257 aa		4.88	□□□□□ -1.63
CDC42BPA-213	ENST00000488131	GNL1	P36915	607 aa	Predicted RBP	4.88	□□□□□ -1.63
CDC42BPA-213	ENST00000488131	GPC3	P51654	580 aa		4.88	□□□□□ -1.63
CDC42BPA-213	ENST00000488131	CTAG1A	P78358	180 aa		4.88	□□□□□ -1.63
CDC42BPA-213	ENST00000488131	KDSR	Q06136	332 aa		4.88	□□□□□ -1.63
CDC42BPA-213	ENST00000488131	WASHC5	Q12768	1159 aa		4.88	□□□□□ -1.63
CDC42BPA-213	ENST00000488131	NFIA	Q12857	509 aa		4.88	□□□□□ -1.63
CDC42BPA-213	ENST00000488131	PTP4A2	Q12974	167 aa		4.88	□□□□□ -1.63
CDC42BPA-213	ENST00000488131	DRAP1	Q14919	205 aa	Predicted RBP	4.88	□□□□□ -1.63
CDC42BPA-213	ENST00000488131	PUM3	Q15397	648 aa	Known RBP	4.88	□□□□□ -1.63
CDC42BPA-213	ENST00000488131	SEPT7	Q16181	437 aa	Known RBP	4.88	□□□□□ -1.63
CDC42BPA-213	ENST00000488131	LSM12	Q3MHD2	195 aa	Known RBP	4.88	□□□□□ -1.63
CDC42BPA-213	ENST00000488131	TEX44	Q53QW1	395 aa		4.88	□□□□□ -1.63
CDC42BPA-213	ENST00000488131	TDRD10	Q5VZ19	366 aa	Known RBP	4.88	□□□□□ -1.63
CDC42BPA-213	ENST00000488131	KRT79	Q5XKE5	535 aa		4.88	□□□□□ -1.63
CDC42BPA-213	ENST00000488131	BTBD8	Q5XKL5	378 aa		4.88	□□□□□ -1.63
CDC42BPA-213	ENST00000488131	SIGIRR	Q6IA17	410 aa		4.88	□□□□□ -1.63
CDC42BPA-213	ENST00000488131	CYP4F22	Q6NT55	531 aa		4.88	□□□□□ -1.63
CDC42BPA-213	ENST00000488131	PAOX	Q6QHF9	649 aa		4.88	□□□□□ -1.63
CDC42BPA-213	ENST00000488131	SEZ6L2	Q6UXD5	910 aa		4.88	□□□□□ -1.63
CDC42BPA-213	ENST00000488131	SH2D5	Q6ZV89	423 aa		4.88	□□□□□ -1.63
CDC42BPA-213	ENST00000488131	NLRP10	Q86W26	655 aa		4.88	□□□□□ -1.63
CDC42BPA-213	ENST00000488131	ZNF354C	Q86Y25	554 aa		4.88	□□□□□ -1.63
CDC42BPA-213	ENST00000488131	PHF6	Q8IWS0	365 aa	Known RBP eCLIP	4.88	□□□□□ -1.63
CDC42BPA-213	ENST00000488131	ARMC10	Q8N2F6	343 aa		4.88	□□□□□ -1.63
CDC42BPA-213	ENST00000488131	ELMOD1	Q8N336	334 aa		4.88	□□□□□ -1.63
CDC42BPA-213	ENST00000488131	SPERT	Q8NA61	448 aa		4.88	□□□□□ -1.63
CDC42BPA-213	ENST00000488131	PDPR	Q8NCN5	879 aa		4.88	□□□□□ -1.63
CDC42BPA-213	ENST00000488131	SHKBP1	Q8TBC3	707 aa		4.88	□□□□□ -1.63
CDC42BPA-213	ENST00000488131	C1orf54	Q8WWF1	131 aa		4.88	□□□□□ -1.63
CDC42BPA-213	ENST00000488131	USP6NL	Q92738	828 aa		4.88	□□□□□ -1.63
CDC42BPA-213	ENST00000488131	TAMM41	Q96BW9	452 aa		4.88	□□□□□ -1.63
CDC42BPA-213	ENST00000488131	C12orf43	Q96C57	262 aa	Known RBP	4.88	□□□□□ -1.63
CDC42BPA-213	ENST00000488131	VWCE	Q96DN2	955 aa		4.88	□□□□□ -1.63
CDC42BPA-213	ENST00000488131	CNDP2	Q96KP4	475 aa	Known RBP	4.88	□□□□□ -1.63
CDC42BPA-213	ENST00000488131	CCDC74B	Q96LY2	380 aa		4.88	□□□□□ -1.63
CDC42BPA-213	ENST00000488131	CNBD2	Q96M20	576 aa		4.88	□□□□□ -1.63
CDC42BPA-213	ENST00000488131	PWWP2A	Q96N64	755 aa		4.88	□□□□□ -1.63
CDC42BPA-213	ENST00000488131	NAP1L4	Q99733	375 aa	Known RBP	4.88	□□□□□ -1.63
CDC42BPA-213	ENST00000488131	AGPAT1	Q99943	283 aa		4.88	□□□□□ -1.63
CDC42BPA-213	ENST00000488131	GCOM2	Q9BZD3	368 aa	Predicted RBP	4.88	□□□□□ -1.63
CDC42BPA-213	ENST00000488131	FOXQ1	Q9C009	403 aa		4.88	□□□□□ -1.63
CDC42BPA-213	ENST00000488131	PAIP1	Q9H074	479 aa	Known RBP	4.88	□□□□□ -1.63
CDC42BPA-213	ENST00000488131	CDH19	Q9H159	772 aa		4.88	□□□□□ -1.63
CDC42BPA-213	ENST00000488131	EHD1	Q9H4M9	534 aa		4.88	□□□□□ -1.63
CDC42BPA-213	ENST00000488131	LIN28A	Q9H9Z2	209 aa	Known RBP	4.88	□□□□□ -1.63
CDC42BPA-213	ENST00000488131	PNPLA3	Q9NST1	481 aa		4.88	□□□□□ -1.63
CDC42BPA-213	ENST00000488131	RIC8B	Q9NVN3	520 aa		4.88	□□□□□ -1.63
CDC42BPA-213	ENST00000488131	MKS1	Q9NXB0	559 aa		4.88	□□□□□ -1.63
CDC42BPA-213	ENST00000488131	SLC17A7	Q9P2U7	560 aa		4.88	□□□□□ -1.63
CDC42BPA-213	ENST00000488131	PPARGC1A	Q9UBK2	798 aa	Known RBP	4.88	□□□□□ -1.63
CDC42BPA-213	ENST00000488131	ZMYM5	Q9UJ78	669 aa		4.88	□□□□□ -1.63
CDC42BPA-213	ENST00000488131	PCOLCE2	Q9UKZ9	415 aa		4.88	□□□□□ -1.63
CDC42BPA-213	ENST00000488131	RABL2B	Q9UNT1	228 aa		4.88	□□□□□ -1.63
CDC42BPA-213	ENST00000488131	SHOC2	Q9UQ13	582 aa		4.88	□□□□□ -1.63
CDC42BPA-213	ENST00000488131	HEMK1	Q9Y5R4	338 aa	Predicted RBP	4.88	□□□□□ -1.63
CDC42BPA-213	ENST00000488131	SCIN	Q9Y6U3	715 aa		4.88	□□□□□ -1.63
CDC42BPA-213	ENST00000488131	CNTNAP4	Q9C0A0	1308 aa		4.87	□□□□□ -1.63
CDC42BPA-213	ENST00000488131	ZNF335	Q9H4Z2	1342 aa	Predicted RBP	4.87	□□□□□ -1.63
CDC42BPA-213	ENST00000488131	KDM3A	Q9Y4C1	1321 aa		4.87	□□□□□ -1.63
CDC42BPA-213	ENST00000488131	TAF1L	Q8IZX4	1826 aa		4.87	□□□□□ -1.63
CDC42BPA-213	ENST00000488131		A0A0B4J269	797 aa		4.87	□□□□□ -1.63
CDC42BPA-213	ENST00000488131	KIR2DP1	A0A0G2JNF4	349 aa	Predicted RBP	4.87	□□□□□ -1.63
CDC42BPA-213	ENST00000488131	MYOCOS	A0A1B0GUC4	107 aa		4.87	□□□□□ -1.63
CDC42BPA-213	ENST00000488131	PRSS51	A0A1B0GVH4	220 aa		4.87	□□□□□ -1.63
CDC42BPA-213	ENST00000488131	NOTO	A8MTQ0	251 aa		4.87	□□□□□ -1.63
CDC42BPA-213	ENST00000488131	PRR5-ARHGAP8	B1AHC4	643 aa		4.87	□□□□□ -1.63
CDC42BPA-213	ENST00000488131	POC1B-GALNT4	F8VUJ3	575 aa		4.87	□□□□□ -1.63
CDC42BPA-213	ENST00000488131	DNALI1	O14645	258 aa	Predicted RBP	4.87	□□□□□ -1.63

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