RNA–Protein interactions for RNA: ENST00000487150.2

LIMS3-205, Transcript of LIM zinc finger domain containing 3, humanhuman

TSL 3 BASIC

Gene LIMS3, Length 782 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LIMS3-205ENST00000487150 TMEM248Q9NWD8 314 aa15.05■□□□□ -0
LIMS3-205ENST00000487150 BCCIPQ9P287 314 aaKnown RBP eCLIP15.05■□□□□ -0
LIMS3-205ENST00000487150 SLC25A13Q9UJS0 675 aa15.05■□□□□ -0
LIMS3-205ENST00000487150 STON1Q9Y6Q2 735 aa15.05■□□□□ -0
LIMS3-205ENST00000487150 AXIN1O15169 862 aa15.04■□□□□ -0
LIMS3-205ENST00000487150 MTA2O94776 668 aa15.04■□□□□ -0
LIMS3-205ENST00000487150 PROSCO94903 275 aa15.04■□□□□ -0
LIMS3-205ENST00000487150 NDUFA10O95299 355 aa15.04■□□□□ -0
LIMS3-205ENST00000487150 TDGF1P13385 188 aa15.04■□□□□ -0
LIMS3-205ENST00000487150 ARL4AP40617 200 aa15.04■□□□□ -0
LIMS3-205ENST00000487150 TCEAL1Q15170 157 aa15.04■□□□□ -0
LIMS3-205ENST00000487150 EMC10Q5UCC4 262 aa15.04■□□□□ -0
LIMS3-205ENST00000487150 TFAP2DQ7Z6R9 452 aa15.04■□□□□ -0
LIMS3-205ENST00000487150 CCDC112Q8NEF3 446 aa15.04■□□□□ -0
LIMS3-205ENST00000487150 ARHGEF26Q96DR7 871 aa15.04■□□□□ -0
LIMS3-205ENST00000487150 HHIPQ96QV1 700 aa15.04■□□□□ -0
LIMS3-205ENST00000487150 FEM1AQ9BSK4 669 aa15.04■□□□□ -0
LIMS3-205ENST00000487150 SNRNP25Q9BV90 132 aaKnown RBP15.04■□□□□ -0
LIMS3-205ENST00000487150 TRIM7Q9C029 511 aa15.04■□□□□ -0
LIMS3-205ENST00000487150 DHX35Q9H5Z1 703 aaKnown RBP15.04■□□□□ -0
LIMS3-205ENST00000487150 CACNA2D2Q9NY47 1150 aa15.04■□□□□ -0
LIMS3-205ENST00000487150 SUN2Q9UH99 717 aa15.04■□□□□ -0
LIMS3-205ENST00000487150 HPCAL4Q9UM19 191 aa15.04■□□□□ -0
LIMS3-205ENST00000487150 A0A0A6YYK5 440 aaPredicted RBP15.03■□□□□ -0
LIMS3-205ENST00000487150 TCRBV21S2A2A0A5A6 115 aa15.03■□□□□ -0
LIMS3-205ENST00000487150 H3BRJ5 948 aa15.03■□□□□ -0
LIMS3-205ENST00000487150 CREB3O43889 395 aa15.03■□□□□ -0
LIMS3-205ENST00000487150 RAMP2O60895 175 aa15.03■□□□□ -0
LIMS3-205ENST00000487150 ADAM23O75077 832 aa15.03■□□□□ -0
LIMS3-205ENST00000487150 KRT7P08729 469 aa15.03■□□□□ -0
LIMS3-205ENST00000487150 NBL1P41271 181 aa15.03■□□□□ -0
LIMS3-205ENST00000487150 SLC1A1P43005 524 aa15.03■□□□□ -0
LIMS3-205ENST00000487150 MAGEA1P43355 309 aa15.03■□□□□ -0
LIMS3-205ENST00000487150 CLCN6P51797 869 aa15.03■□□□□ -0
LIMS3-205ENST00000487150 ALFQ53S48 1182 aa15.03■□□□□ -0
LIMS3-205ENST00000487150 FSCBQ5H9T9 825 aa15.03■□□□□ -0
LIMS3-205ENST00000487150 TMEM215Q68D42 235 aa15.03■□□□□ -0
LIMS3-205ENST00000487150 ANO7Q6IWH7 933 aa15.03■□□□□ -0
LIMS3-205ENST00000487150 RETSATQ6NUM9 610 aa15.03■□□□□ -0
LIMS3-205ENST00000487150 METTL3Q86U44 580 aaKnown RBP15.03■□□□□ -0
LIMS3-205ENST00000487150 RASSF3Q86WH2 238 aa15.03■□□□□ -0
LIMS3-205ENST00000487150 RTL3Q8N8U3 475 aaKnown RBP15.03■□□□□ -0
LIMS3-205ENST00000487150 SPC24Q8NBT2 197 aa15.03■□□□□ -0
LIMS3-205ENST00000487150 CCDC114Q96M63 670 aa15.03■□□□□ -0
LIMS3-205ENST00000487150 PACSIN1Q9BY11 444 aa15.03■□□□□ -0
LIMS3-205ENST00000487150 MAGEH1Q9H213 219 aa15.03■□□□□ -0
LIMS3-205ENST00000487150 TMEM245Q9H330 911 aa15.03■□□□□ -0
LIMS3-205ENST00000487150 GRPEL1Q9HAV7 217 aa15.03■□□□□ -0
LIMS3-205ENST00000487150 TMPRSS4Q9NRS4 437 aa15.03■□□□□ -0
LIMS3-205ENST00000487150 MPP6Q9NZW5 540 aa15.03■□□□□ -0
LIMS3-205ENST00000487150 RCOR3Q9P2K3 495 aaPredicted RBP15.03■□□□□ -0
LIMS3-205ENST00000487150 PCSK1NQ9UHG2 260 aa15.03■□□□□ -0
LIMS3-205ENST00000487150 RAB23Q9ULC3 237 aa15.03■□□□□ -0
LIMS3-205ENST00000487150 EPN1Q9Y6I3 576 aaPredicted RBP15.03■□□□□ -0
LIMS3-205ENST00000487150 ZSCAN5CA6NGD5 496 aaPredicted RBP15.02■□□□□ -0
LIMS3-205ENST00000487150 WASH4PA8MWX3 477 aa15.02■□□□□ -0
LIMS3-205ENST00000487150 EEF2KO00418 725 aaKnown RBP15.02■□□□□ -0
LIMS3-205ENST00000487150 DAPK3O43293 454 aa15.02■□□□□ -0
LIMS3-205ENST00000487150 ZNF217O75362 1048 aa15.02■□□□□ -0
LIMS3-205ENST00000487150 CNTN5O94779 1100 aa15.02■□□□□ -0
LIMS3-205ENST00000487150 EPHX1P07099 455 aa15.02■□□□□ -0
LIMS3-205ENST00000487150 IL12RB1P42701 662 aa15.02■□□□□ -0
LIMS3-205ENST00000487150 SSR1P43307 286 aaKnown RBP15.02■□□□□ -0
LIMS3-205ENST00000487150 HCAR3P49019 387 aa15.02■□□□□ -0
LIMS3-205ENST00000487150 HADHBP55084 474 aaKnown RBP15.02■□□□□ -0
LIMS3-205ENST00000487150 YBEYP58557 167 aaPredicted RBP15.02■□□□□ -0
LIMS3-205ENST00000487150 NHLH1Q02575 133 aa15.02■□□□□ -0
LIMS3-205ENST00000487150 GNA12Q03113 381 aa15.02■□□□□ -0
LIMS3-205ENST00000487150 ZBTB16Q05516 673 aa15.02■□□□□ -0
LIMS3-205ENST00000487150 SLC20A2Q08357 652 aa15.02■□□□□ -0
LIMS3-205ENST00000487150 SFSWAPQ12872 951 aaKnown RBP15.02■□□□□ -0
LIMS3-205ENST00000487150 SEMA3BQ13214 749 aa15.02■□□□□ -0
LIMS3-205ENST00000487150 DPYSL2Q16555 572 aa15.02■□□□□ -0
LIMS3-205ENST00000487150 PARP15Q460N3 678 aa15.02■□□□□ -0
LIMS3-205ENST00000487150 USP39Q53GS9 565 aaKnown RBP15.02■□□□□ -0
LIMS3-205ENST00000487150 TSSK4Q6SA08 328 aa15.02■□□□□ -0
LIMS3-205ENST00000487150 POLNQ7Z5Q5 900 aa15.02■□□□□ -0
LIMS3-205ENST00000487150 NLRP14Q86W24 1093 aa15.02■□□□□ -0
LIMS3-205ENST00000487150 MAP7D3Q8IWC1 876 aa15.02■□□□□ -0
LIMS3-205ENST00000487150 SLC35G2Q8TBE7 412 aa15.02■□□□□ -0
LIMS3-205ENST00000487150 CYB5D2Q8WUJ1 264 aa15.02■□□□□ -0
LIMS3-205ENST00000487150 INTS6Q9UL03 887 aaKnown RBP15.02■□□□□ -0
LIMS3-205ENST00000487150 ERVW-1Q9UQF0 538 aa15.02■□□□□ -0
LIMS3-205ENST00000487150 PCDHA13Q9Y5I0 950 aa15.02■□□□□ -0
LIMS3-205ENST00000487150 SNX10Q9Y5X0 201 aa15.02■□□□□ -0
LIMS3-205ENST00000487150 MUC6Q6W4X9 2439 aa15.02□□□□□ -0.01
LIMS3-205ENST00000487150 CACNA1HO95180 2353 aa15.02□□□□□ -0.01
LIMS3-205ENST00000487150 EDDM13A0A1B0GTR0 161 aa15.01□□□□□ -0.01
LIMS3-205ENST00000487150 A0A1W2PQF6 199 aa15.01□□□□□ -0.01
LIMS3-205ENST00000487150 TARSL2A2RTX5 802 aaKnown RBP15.01□□□□□ -0.01
LIMS3-205ENST00000487150 SOWAHDA6NJG2 315 aa15.01□□□□□ -0.01
LIMS3-205ENST00000487150 RNASEH1O60930 286 aaKnown RBP15.01□□□□□ -0.01
LIMS3-205ENST00000487150 LILRB5O75023 590 aa15.01□□□□□ -0.01
LIMS3-205ENST00000487150 MZF1P28698 734 aaPredicted RBP15.01□□□□□ -0.01
LIMS3-205ENST00000487150 FNTBP49356 437 aa15.01□□□□□ -0.01
LIMS3-205ENST00000487150 IRAK1P51617 712 aa15.01□□□□□ -0.01
LIMS3-205ENST00000487150 CAMK2GQ13555 558 aaPredicted RBP15.01□□□□□ -0.01
LIMS3-205ENST00000487150 IFI16Q16666 785 aaKnown RBP15.01□□□□□ -0.01
LIMS3-205ENST00000487150 PTPRNQ16849 979 aa15.01□□□□□ -0.01
LIMS3-205ENST00000487150 HNRNPA1L2Q32P51 320 aaKnown RBP15.01□□□□□ -0.01
Retrieved 100 of 20,778 RNA–protein pairs in 43.3 ms