RNA–Protein interactions for RNA: ENST00000486995.5

PTCD2-204, Transcript of pentatricopeptide repeat domain 2, humanhuman

TSL 2

Gene PTCD2, Length 2,648 nt, Biotype nonsense mediated decay.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTCD2-204ENST00000486995 RAB41Q5JT25 222 aa12.61□□□□□ -0.39
PTCD2-204ENST00000486995 MORN1Q5T089 497 aa12.61□□□□□ -0.39
PTCD2-204ENST00000486995 FAM35AQ86V20 835 aa12.61□□□□□ -0.39
PTCD2-204ENST00000486995 ULK2Q8IYT8 1036 aa12.61□□□□□ -0.39
PTCD2-204ENST00000486995 PLD6Q8N2A8 252 aaKnown RBP12.61□□□□□ -0.39
PTCD2-204ENST00000486995 SERBP1Q8NC51 408 aaKnown RBP eCLIP12.61□□□□□ -0.39
PTCD2-204ENST00000486995 STMN2Q93045 179 aa12.61□□□□□ -0.39
PTCD2-204ENST00000486995 AZIN2Q96A70 460 aa12.61□□□□□ -0.39
PTCD2-204ENST00000486995 ZNF669Q96BR6 464 aaPredicted RBP12.61□□□□□ -0.39
PTCD2-204ENST00000486995 PGAP3Q96FM1 320 aaPredicted RBP12.61□□□□□ -0.39
PTCD2-204ENST00000486995 AGAP2Q99490 1192 aa12.61□□□□□ -0.39
PTCD2-204ENST00000486995 SYT15Q9BQS2 421 aa12.61□□□□□ -0.39
PTCD2-204ENST00000486995 THTPAQ9BU02 230 aa12.61□□□□□ -0.39
PTCD2-204ENST00000486995 MLPHQ9BV36 600 aaPredicted RBP12.61□□□□□ -0.39
PTCD2-204ENST00000486995 CNGB3Q9NQW8 809 aa12.61□□□□□ -0.39
PTCD2-204ENST00000486995 BFARQ9NZS9 450 aa12.61□□□□□ -0.39
PTCD2-204ENST00000486995 TIMM13Q9Y5L4 95 aaPredicted RBP12.61□□□□□ -0.39
PTCD2-204ENST00000486995 C17orf102A2RUQ5 167 aa12.61□□□□□ -0.39
PTCD2-204ENST00000486995 NCAM2O15394 837 aa12.61□□□□□ -0.39
PTCD2-204ENST00000486995 USP1O94782 785 aa12.61□□□□□ -0.39
PTCD2-204ENST00000486995 C6orf222P0C671 652 aaPredicted RBP12.61□□□□□ -0.39
PTCD2-204ENST00000486995 RALBP11234 206 aa12.61□□□□□ -0.39
PTCD2-204ENST00000486995 GARSP41250 739 aaKnown RBP12.61□□□□□ -0.39
PTCD2-204ENST00000486995 IDH3AP50213 366 aa12.61□□□□□ -0.39
PTCD2-204ENST00000486995 LIMK2P53671 638 aa12.61□□□□□ -0.39
PTCD2-204ENST00000486995 ZBTB17Q13105 803 aa12.61□□□□□ -0.39
PTCD2-204ENST00000486995 TSNAXIP1Q2TAA8 658 aa12.61□□□□□ -0.39
PTCD2-204ENST00000486995 MUM1Q2TAK8 710 aa12.61□□□□□ -0.39
PTCD2-204ENST00000486995 DNAL1Q4LDG9 190 aa12.61□□□□□ -0.39
PTCD2-204ENST00000486995 ANKRD20A4Q4UJ75 823 aa12.61□□□□□ -0.39
PTCD2-204ENST00000486995 FSTL4Q6MZW2 842 aa12.61□□□□□ -0.39
PTCD2-204ENST00000486995 NET1Q7Z628 596 aaPredicted RBP12.61□□□□□ -0.39
PTCD2-204ENST00000486995 STRA8Q7Z7C7 330 aa12.61□□□□□ -0.39
PTCD2-204ENST00000486995 COLEC11Q9BWP8 271 aa12.61□□□□□ -0.39
PTCD2-204ENST00000486995 SLC7A8Q9UHI5 535 aa12.61□□□□□ -0.39
PTCD2-204ENST00000486995 APOBEC2Q9Y235 224 aaKnown RBP12.61□□□□□ -0.39
PTCD2-204ENST00000486995 EIF4E1BA6NMX2 242 aaKnown RBP12.6□□□□□ -0.39
PTCD2-204ENST00000486995 HHLA1C9JL84 531 aa12.6□□□□□ -0.39
PTCD2-204ENST00000486995 CPA3P15088 417 aa12.6□□□□□ -0.39
PTCD2-204ENST00000486995 ALOX15P16050 662 aaPredicted RBP12.6□□□□□ -0.39
PTCD2-204ENST00000486995 SPRP35270 261 aaPredicted RBP12.6□□□□□ -0.39
PTCD2-204ENST00000486995 HARS2P49590 506 aaKnown RBP12.6□□□□□ -0.39
PTCD2-204ENST00000486995 ABCE1P61221 599 aaKnown RBP12.6□□□□□ -0.39
PTCD2-204ENST00000486995 ITGA9Q13797 1035 aa12.6□□□□□ -0.39
PTCD2-204ENST00000486995 FRG1Q14331 258 aaKnown RBP12.6□□□□□ -0.39
PTCD2-204ENST00000486995 CERCAMQ5T4B2 595 aa12.6□□□□□ -0.39
PTCD2-204ENST00000486995 LRRC74BQ6ZQY2 392 aa12.6□□□□□ -0.39
PTCD2-204ENST00000486995 BHLHA9Q7RTU4 235 aa12.6□□□□□ -0.39
PTCD2-204ENST00000486995 TNS4Q8IZW8 715 aa12.6□□□□□ -0.39
PTCD2-204ENST00000486995 DNAAF3Q8N9W5 541 aa12.6□□□□□ -0.39
PTCD2-204ENST00000486995 SCG3Q8WXD2 468 aaKnown RBP12.6□□□□□ -0.39
PTCD2-204ENST00000486995 MFSD3Q96ES6 412 aa12.6□□□□□ -0.39
PTCD2-204ENST00000486995 ATXN7L3BQ96GX2 97 aa12.6□□□□□ -0.39
PTCD2-204ENST00000486995 PANX3Q96QZ0 392 aa12.6□□□□□ -0.39
PTCD2-204ENST00000486995 SPON1Q9HCB6 807 aa12.6□□□□□ -0.39
PTCD2-204ENST00000486995 DDIT4Q9NX09 232 aa12.6□□□□□ -0.39
PTCD2-204ENST00000486995 ADAM28Q9UKQ2 775 aa12.6□□□□□ -0.39
PTCD2-204ENST00000486995 SNX10Q9Y5X0 201 aa12.6□□□□□ -0.39
PTCD2-204ENST00000486995 GLTPD2A6NH11 291 aa12.6□□□□□ -0.39
PTCD2-204ENST00000486995 SIN3BO75182 1162 aa12.6□□□□□ -0.39
PTCD2-204ENST00000486995 ZNF189O75820 626 aaPredicted RBP12.6□□□□□ -0.39
PTCD2-204ENST00000486995 LTFP02788 710 aa12.6□□□□□ -0.39
PTCD2-204ENST00000486995 HOXC8P31273 242 aa12.6□□□□□ -0.39
PTCD2-204ENST00000486995 LHX1P48742 406 aa12.6□□□□□ -0.39
PTCD2-204ENST00000486995 CPT1AP50416 773 aa12.6□□□□□ -0.39
PTCD2-204ENST00000486995 CLCNKBP51801 687 aa12.6□□□□□ -0.39
PTCD2-204ENST00000486995 MAP2K5Q13163 448 aa12.6□□□□□ -0.39
PTCD2-204ENST00000486995 IRF5Q13568 498 aa12.6□□□□□ -0.39
PTCD2-204ENST00000486995 CCDC153Q494R4 210 aa12.6□□□□□ -0.39
PTCD2-204ENST00000486995 INTS6LQ5JSJ4 861 aaKnown RBP12.6□□□□□ -0.39
PTCD2-204ENST00000486995 RIPOR1Q6ZS17 1223 aa12.6□□□□□ -0.39
PTCD2-204ENST00000486995 ZSCAN18Q8TBC5 510 aaPredicted RBP12.6□□□□□ -0.39
PTCD2-204ENST00000486995 PPP4R1Q8TF05 950 aa12.6□□□□□ -0.39
PTCD2-204ENST00000486995 HDAC11Q96DB2 347 aa12.6□□□□□ -0.39
PTCD2-204ENST00000486995 BRD8Q9H0E9 1235 aa12.6□□□□□ -0.39
PTCD2-204ENST00000486995 GBA3Q9H227 469 aa12.6□□□□□ -0.39
PTCD2-204ENST00000486995 DNAJC28Q9NX36 388 aa12.6□□□□□ -0.39
PTCD2-204ENST00000486995 MIOSQ9NXC5 875 aa12.6□□□□□ -0.39
PTCD2-204ENST00000486995 DONSONQ9NYP3 566 aa12.6□□□□□ -0.39
PTCD2-204ENST00000486995 SUFUQ9UMX1 484 aa12.6□□□□□ -0.39
PTCD2-204ENST00000486995 WASF2Q9Y6W5 498 aa12.6□□□□□ -0.39
PTCD2-204ENST00000486995 A6NHS1 94 aa12.59□□□□□ -0.39
PTCD2-204ENST00000486995 KLHL2O95198 593 aa12.59□□□□□ -0.39
PTCD2-204ENST00000486995 MX2P20592 715 aa12.59□□□□□ -0.39
PTCD2-204ENST00000486995 SERPINB8P50452 374 aa12.59□□□□□ -0.39
PTCD2-204ENST00000486995 CDK7P50613 346 aa12.59□□□□□ -0.39
PTCD2-204ENST00000486995 ACTR3P61158 418 aa12.59□□□□□ -0.39
PTCD2-204ENST00000486995 GALNT2Q10471 571 aa12.59□□□□□ -0.39
PTCD2-204ENST00000486995 CCL14Q16627 93 aa12.59□□□□□ -0.39
PTCD2-204ENST00000486995 TRMT5Q32P41 509 aaKnown RBP12.59□□□□□ -0.39
PTCD2-204ENST00000486995 HSP90AA5PQ58FG0 334 aa12.59□□□□□ -0.39
PTCD2-204ENST00000486995 SPRYD7Q5W111 196 aa12.59□□□□□ -0.39
PTCD2-204ENST00000486995 C3orf58Q8NDZ4 430 aa12.59□□□□□ -0.39
PTCD2-204ENST00000486995 MICAL1Q8TDZ2 1067 aa12.59□□□□□ -0.39
PTCD2-204ENST00000486995 EDEM1Q92611 657 aa12.59□□□□□ -0.39
PTCD2-204ENST00000486995 DPF3Q92784 378 aa12.59□□□□□ -0.39
PTCD2-204ENST00000486995 FAM136AQ96C01 138 aa12.59□□□□□ -0.39
PTCD2-204ENST00000486995 GAD1Q99259 594 aa12.59□□□□□ -0.39
PTCD2-204ENST00000486995 CHRAC1Q9NRG0 131 aa12.59□□□□□ -0.39
PTCD2-204ENST00000486995 ZNF212Q9UDV6 495 aa12.59□□□□□ -0.39
Retrieved 100 of 20,778 RNA–protein pairs in 18.8 ms