RNA–Protein interactions for RNA: ENST00000486641.2

CCDC171-208, Transcript of coiled-coil domain containing 171, humanhuman

TSL 1 (best)

Gene CCDC171, Length 2,322 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC171-208ENST00000486641 CEP170P1Q96L14 293 aa10.87□□□□□ -0.67
CCDC171-208ENST00000486641 MARK4Q96L34 752 aa10.87□□□□□ -0.67
CCDC171-208ENST00000486641 RNF157Q96PX1 679 aa10.87□□□□□ -0.67
CCDC171-208ENST00000486641 DOK1Q99704 481 aa10.87□□□□□ -0.67
CCDC171-208ENST00000486641 CDCA7Q9BWT1 371 aaPredicted RBP10.87□□□□□ -0.67
CCDC171-208ENST00000486641 PDZD7Q9H5P4 517 aa10.87□□□□□ -0.67
CCDC171-208ENST00000486641 ADA2Q9NZK5 511 aa10.87□□□□□ -0.67
CCDC171-208ENST00000486641 IPO11Q9UI26 975 aaKnown RBP10.87□□□□□ -0.67
CCDC171-208ENST00000486641 UBIAD1Q9Y5Z9 338 aa10.87□□□□□ -0.67
CCDC171-208ENST00000486641 SLX4Q8IY92 1834 aa10.87□□□□□ -0.67
CCDC171-208ENST00000486641 SOCS2O14508 198 aa10.87□□□□□ -0.67
CCDC171-208ENST00000486641 LSM1O15116 133 aaKnown RBP10.87□□□□□ -0.67
CCDC171-208ENST00000486641 TPD52L2O43399 206 aaKnown RBP10.87□□□□□ -0.67
CCDC171-208ENST00000486641 HMGCRP04035 888 aa10.87□□□□□ -0.67
CCDC171-208ENST00000486641 CHRNGP07510 517 aa10.87□□□□□ -0.67
CCDC171-208ENST00000486641 MPSTP25325 297 aa10.87□□□□□ -0.67
CCDC171-208ENST00000486641 DCKP27707 260 aa10.87□□□□□ -0.67
CCDC171-208ENST00000486641 POLR2BP30876 1174 aaKnown RBP10.87□□□□□ -0.67
CCDC171-208ENST00000486641 GRM5P41594 1212 aa10.87□□□□□ -0.67
CCDC171-208ENST00000486641 RPS3AP61247 264 aaKnown RBP10.87□□□□□ -0.67
CCDC171-208ENST00000486641 RHDQ02161 417 aa10.87□□□□□ -0.67
CCDC171-208ENST00000486641 ITGADQ13349 1161 aa10.87□□□□□ -0.67
CCDC171-208ENST00000486641 TFDP2Q14188 446 aa10.87□□□□□ -0.67
CCDC171-208ENST00000486641 DOK7Q18PE1 504 aa10.87□□□□□ -0.67
CCDC171-208ENST00000486641 RGS21Q2M5E4 152 aa10.87□□□□□ -0.67
CCDC171-208ENST00000486641 ZBTB49Q6ZSB9 765 aa10.87□□□□□ -0.67
CCDC171-208ENST00000486641 CYP4V2Q6ZWL3 525 aaPredicted RBP10.87□□□□□ -0.67
CCDC171-208ENST00000486641 CYS1Q717R9 158 aa10.87□□□□□ -0.67
CCDC171-208ENST00000486641 NANOGNBQ7Z5D8 188 aa10.87□□□□□ -0.67
CCDC171-208ENST00000486641 CMC1Q7Z7K0 106 aa10.87□□□□□ -0.67
CCDC171-208ENST00000486641 XYLT1Q86Y38 959 aa10.87□□□□□ -0.67
CCDC171-208ENST00000486641 SLC4A11Q8NBS3 891 aa10.87□□□□□ -0.67
CCDC171-208ENST00000486641 ASB9Q96DX5 294 aa10.87□□□□□ -0.67
CCDC171-208ENST00000486641 CPXM1Q96SM3 734 aa10.87□□□□□ -0.67
CCDC171-208ENST00000486641 CGRRF1Q99675 332 aa10.87□□□□□ -0.67
CCDC171-208ENST00000486641 COA1Q9GZY4 146 aa10.87□□□□□ -0.67
CCDC171-208ENST00000486641 ZNF385DQ9H6B1 395 aa10.87□□□□□ -0.67
CCDC171-208ENST00000486641 MTMR10Q9NXD2 777 aa10.87□□□□□ -0.67
CCDC171-208ENST00000486641 HESX1Q9UBX0 185 aa10.87□□□□□ -0.67
CCDC171-208ENST00000486641 ERGIC3Q9Y282 383 aa10.87□□□□□ -0.67
CCDC171-208ENST00000486641 QSER1Q2KHR3 1735 aa10.87□□□□□ -0.67
CCDC171-208ENST00000486641 BCLAF3A2AJT9 711 aaKnown RBP10.86□□□□□ -0.67
CCDC171-208ENST00000486641 TCAF2A6NFQ2 919 aa10.86□□□□□ -0.67
CCDC171-208ENST00000486641 PALM2-AKAP2B1ALY0 433 aaPredicted RBP10.86□□□□□ -0.67
CCDC171-208ENST00000486641 G3V2L1 256 aa10.86□□□□□ -0.67
CCDC171-208ENST00000486641 AKAP10O43572 662 aa10.86□□□□□ -0.67
CCDC171-208ENST00000486641 CLASP2O75122 1294 aaKnown RBP10.86□□□□□ -0.67
CCDC171-208ENST00000486641 CNOT3O75175 753 aaKnown RBP10.86□□□□□ -0.67
CCDC171-208ENST00000486641 SEC24DO94855 1032 aaPredicted RBP10.86□□□□□ -0.67
CCDC171-208ENST00000486641 IL4RP24394 825 aa10.86□□□□□ -0.67
CCDC171-208ENST00000486641 CCR10P46092 362 aa10.86□□□□□ -0.67
CCDC171-208ENST00000486641 GALNT2Q10471 571 aa10.86□□□□□ -0.67
CCDC171-208ENST00000486641 TRIM25Q14258 630 aaKnown RBP10.86□□□□□ -0.67
CCDC171-208ENST00000486641 PTK2BQ14289 1009 aa10.86□□□□□ -0.67
CCDC171-208ENST00000486641 RAB39AQ14964 217 aa10.86□□□□□ -0.67
CCDC171-208ENST00000486641 STILQ15468 1287 aa10.86□□□□□ -0.67
CCDC171-208ENST00000486641 CCDC153Q494R4 210 aa10.86□□□□□ -0.67
CCDC171-208ENST00000486641 PRR5LQ6MZQ0 368 aa10.86□□□□□ -0.67
CCDC171-208ENST00000486641 CASC4Q6P4E1 433 aa10.86□□□□□ -0.67
CCDC171-208ENST00000486641 PCDH20Q8N6Y1 951 aaKnown RBP10.86□□□□□ -0.67
CCDC171-208ENST00000486641 ZNF420Q8TAQ5 688 aaPredicted RBP10.86□□□□□ -0.67
CCDC171-208ENST00000486641 AGAP3Q96P47 875 aa10.86□□□□□ -0.67
CCDC171-208ENST00000486641 TCHPQ9BT92 498 aa10.86□□□□□ -0.67
CCDC171-208ENST00000486641 TADA2AO75478 443 aa10.86□□□□□ -0.67
CCDC171-208ENST00000486641 ESRRBO95718 433 aa10.86□□□□□ -0.67
CCDC171-208ENST00000486641 ASS1P00966 412 aaKnown RBP10.86□□□□□ -0.67
CCDC171-208ENST00000486641 ZNF182P17025 639 aaPredicted RBP10.86□□□□□ -0.67
CCDC171-208ENST00000486641 PROZP22891 400 aa10.86□□□□□ -0.67
CCDC171-208ENST00000486641 ETFBP38117 255 aa10.86□□□□□ -0.67
CCDC171-208ENST00000486641 HSD17B4P51659 736 aa10.86□□□□□ -0.67
CCDC171-208ENST00000486641 MYL6P60660 151 aa10.86□□□□□ -0.67
CCDC171-208ENST00000486641 YWHAEP62258 255 aaKnown RBP10.86□□□□□ -0.67
CCDC171-208ENST00000486641 GNA12Q03113 381 aa10.86□□□□□ -0.67
CCDC171-208ENST00000486641 PRKCQQ04759 706 aa10.86□□□□□ -0.67
CCDC171-208ENST00000486641 RFTN1Q14699 578 aaPredicted RBP10.86□□□□□ -0.67
CCDC171-208ENST00000486641 DEPDC1Q5TB30 811 aa10.86□□□□□ -0.67
CCDC171-208ENST00000486641 THOC7Q6I9Y2 204 aaKnown RBP10.86□□□□□ -0.67
CCDC171-208ENST00000486641 TMEM214Q6NUQ4 689 aaKnown RBP10.86□□□□□ -0.67
CCDC171-208ENST00000486641 CHSY3Q70JA7 882 aa10.86□□□□□ -0.67
CCDC171-208ENST00000486641 NIPA1Q7RTP0 329 aa10.86□□□□□ -0.67
CCDC171-208ENST00000486641 ILKAPQ9H0C8 392 aaPredicted RBP10.86□□□□□ -0.67
CCDC171-208ENST00000486641 ZBTB26Q9HCK0 441 aa10.86□□□□□ -0.67
CCDC171-208ENST00000486641 PIH1D1Q9NWS0 290 aaKnown RBP10.86□□□□□ -0.67
CCDC171-208ENST00000486641 GID8Q9NWU2 228 aa10.86□□□□□ -0.67
CCDC171-208ENST00000486641 GIN1Q9NXP7 522 aa10.86□□□□□ -0.67
CCDC171-208ENST00000486641 PTBP2Q9UKA9 531 aaKnown RBP10.86□□□□□ -0.67
CCDC171-208ENST00000486641 STYXL1Q9Y6J8 313 aa10.86□□□□□ -0.67
CCDC171-208ENST00000486641 KRBA1A5PL33 1030 aa10.85□□□□□ -0.67
CCDC171-208ENST00000486641 TRIM64BA6NI03 449 aa10.85□□□□□ -0.67
CCDC171-208ENST00000486641 TMEM114B3SHH9 223 aa10.85□□□□□ -0.67
CCDC171-208ENST00000486641 CFAP99D6REC4 459 aa10.85□□□□□ -0.67
CCDC171-208ENST00000486641 F5H423 210 aaPredicted RBP10.85□□□□□ -0.67
CCDC171-208ENST00000486641 GOLGA8TH3BQL2 631 aa10.85□□□□□ -0.67
CCDC171-208ENST00000486641 HDAC3O15379 428 aa10.85□□□□□ -0.67
CCDC171-208ENST00000486641 GRID2O43424 1007 aa10.85□□□□□ -0.67
CCDC171-208ENST00000486641 BBOX1O75936 387 aa10.85□□□□□ -0.67
CCDC171-208ENST00000486641 LTFP02788 710 aa10.85□□□□□ -0.67
CCDC171-208ENST00000486641 BCAR1P56945 870 aa10.85□□□□□ -0.67
CCDC171-208ENST00000486641 TRAF2Q12933 501 aa10.85□□□□□ -0.67
CCDC171-208ENST00000486641 CRY2Q49AN0 593 aa10.85□□□□□ -0.67
Retrieved 100 of 20,778 RNA–protein pairs in 19.4 ms