RNA–Protein interactions for RNA: ENST00000486023.1

COL6A1-204, Transcript of collagen type VI alpha 1 chain, humanhuman

TSL 2

Gene COL6A1, Length 968 nt, Biotype processed transcript.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL6A1-204ENST00000486023 JOSD2Q8TAC2 188 aa18.18■□□□□ 0.5
COL6A1-204ENST00000486023 CEP76Q8TAP6 659 aa18.18■□□□□ 0.5
COL6A1-204ENST00000486023 NT5C3BQ969T7 300 aa18.18■□□□□ 0.5
COL6A1-204ENST00000486023 AGPAT1Q99943 283 aa18.18■□□□□ 0.5
COL6A1-204ENST00000486023 BPIFA3Q9BQP9 254 aa18.18■□□□□ 0.5
COL6A1-204ENST00000486023 RAB6CQ9H0N0 254 aa18.18■□□□□ 0.5
COL6A1-204ENST00000486023 MPP6Q9NZW5 540 aa18.18■□□□□ 0.5
COL6A1-204ENST00000486023 VPS28Q9UK41 221 aa18.18■□□□□ 0.5
COL6A1-204ENST00000486023 NCKAP1Q9Y2A7 1128 aa18.18■□□□□ 0.5
COL6A1-204ENST00000486023 GON4LQ3T8J9 2241 aa18.17■□□□□ 0.5
COL6A1-204ENST00000486023 I6L893 689 aaPredicted RBP18.17■□□□□ 0.5
COL6A1-204ENST00000486023 CDX4O14627 284 aaPredicted RBP18.17■□□□□ 0.5
COL6A1-204ENST00000486023 CLDN11O75508 207 aa18.17■□□□□ 0.5
COL6A1-204ENST00000486023 SERPINC1P01008 464 aa18.17■□□□□ 0.5
COL6A1-204ENST00000486023 SRPRAP08240 638 aaKnown RBP18.17■□□□□ 0.5
COL6A1-204ENST00000486023 UNGP13051 313 aaPredicted RBP18.17■□□□□ 0.5
COL6A1-204ENST00000486023 VAV1P15498 845 aa18.17■□□□□ 0.5
COL6A1-204ENST00000486023 GNSP15586 552 aa18.17■□□□□ 0.5
COL6A1-204ENST00000486023 SDC4P31431 198 aa18.17■□□□□ 0.5
COL6A1-204ENST00000486023 SLC12A1Q13621 1099 aa18.17■□□□□ 0.5
COL6A1-204ENST00000486023 CLEC16AQ2KHT3 1053 aa18.17■□□□□ 0.5
COL6A1-204ENST00000486023 TTC31Q49AM3 519 aaPredicted RBP18.17■□□□□ 0.5
COL6A1-204ENST00000486023 ALFQ53S48 1182 aa18.17■□□□□ 0.5
COL6A1-204ENST00000486023 C9orf64Q5T6V5 341 aa18.17■□□□□ 0.5
COL6A1-204ENST00000486023 CXorf57Q6NSI4 855 aaKnown RBP18.17■□□□□ 0.5
COL6A1-204ENST00000486023 SLC23A3Q6PIS1 610 aa18.17■□□□□ 0.5
COL6A1-204ENST00000486023 STK40Q8N2I9 435 aa18.17■□□□□ 0.5
COL6A1-204ENST00000486023 ZCCHC9Q8N567 271 aaKnown RBP18.17■□□□□ 0.5
COL6A1-204ENST00000486023 OR52K2Q8NGK3 314 aa18.17■□□□□ 0.5
COL6A1-204ENST00000486023 OR2I1PQ8NGU4 316 aa18.17■□□□□ 0.5
COL6A1-204ENST00000486023 SELENOOQ9BVL4 669 aa18.17■□□□□ 0.5
COL6A1-204ENST00000486023 C6orf106Q9H6K1 298 aaPredicted RBP18.17■□□□□ 0.5
COL6A1-204ENST00000486023 RTN4Q9NQC3 1192 aaKnown RBP18.17■□□□□ 0.5
COL6A1-204ENST00000486023 EVLQ9UI08 416 aaPredicted RBP18.17■□□□□ 0.5
COL6A1-204ENST00000486023 EDDM13A0A1B0GTR0 161 aa18.16■□□□□ 0.5
COL6A1-204ENST00000486023 TMCO5BA8MYB1 307 aa18.16■□□□□ 0.5
COL6A1-204ENST00000486023 FSBPO95073 299 aa18.16■□□□□ 0.5
COL6A1-204ENST00000486023 RHOCP08134 193 aa18.16■□□□□ 0.5
COL6A1-204ENST00000486023 SERPINF2P08697 491 aa18.16■□□□□ 0.5
COL6A1-204ENST00000486023 KRT3P12035 628 aa18.16■□□□□ 0.5
COL6A1-204ENST00000486023 FERP16591 822 aa18.16■□□□□ 0.5
COL6A1-204ENST00000486023 PSMD8P48556 350 aa18.16■□□□□ 0.5
COL6A1-204ENST00000486023 CDH4P55283 916 aa18.16■□□□□ 0.5
COL6A1-204ENST00000486023 OXCT1P55809 520 aa18.16■□□□□ 0.5
COL6A1-204ENST00000486023 PGAP3Q96FM1 320 aaPredicted RBP18.16■□□□□ 0.5
COL6A1-204ENST00000486023 PPP1R9BQ96SB3 815 aa18.16■□□□□ 0.5
COL6A1-204ENST00000486023 OMDQ99983 421 aa18.16■□□□□ 0.5
COL6A1-204ENST00000486023 FEM1AQ9BSK4 669 aa18.16■□□□□ 0.5
COL6A1-204ENST00000486023 SPON2Q9BUD6 331 aa18.16■□□□□ 0.5
COL6A1-204ENST00000486023 BTBD1Q9H0C5 482 aa18.16■□□□□ 0.5
COL6A1-204ENST00000486023 RSPH9Q9H1X1 276 aaPredicted RBP18.16■□□□□ 0.5
COL6A1-204ENST00000486023 FBRSQ9HAH7 460 aa18.16■□□□□ 0.5
COL6A1-204ENST00000486023 FBXL12Q9NXK8 326 aa18.16■□□□□ 0.5
COL6A1-204ENST00000486023 EIF2B4Q9UI10 523 aaKnown RBP18.16■□□□□ 0.5
COL6A1-204ENST00000486023 SLC25A13Q9UJS0 675 aa18.16■□□□□ 0.5
COL6A1-204ENST00000486023 SPTBN2O15020 2390 aa18.15■□□□□ 0.5
COL6A1-204ENST00000486023 TARSL2A2RTX5 802 aaKnown RBP18.15■□□□□ 0.5
COL6A1-204ENST00000486023 METTL12A8MUP2 240 aa18.15■□□□□ 0.5
COL6A1-204ENST00000486023 E9PAM4 449 aa18.15■□□□□ 0.5
COL6A1-204ENST00000486023 MID1O15344 667 aa18.15■□□□□ 0.5
COL6A1-204ENST00000486023 RNASEH2AO75792 299 aaKnown RBP18.15■□□□□ 0.5
COL6A1-204ENST00000486023 IL1BP01584 269 aa18.15■□□□□ 0.5
COL6A1-204ENST00000486023 CCDC172P0C7W6 258 aa18.15■□□□□ 0.5
COL6A1-204ENST00000486023 TNFAIP3P21580 790 aa18.15■□□□□ 0.5
COL6A1-204ENST00000486023 SULT2A1Q06520 285 aa18.15■□□□□ 0.5
COL6A1-204ENST00000486023 CST6Q15828 149 aa18.15■□□□□ 0.5
COL6A1-204ENST00000486023 CCDC14Q49A88 953 aa18.15■□□□□ 0.5
COL6A1-204ENST00000486023 RABEPKQ7Z6M1 372 aa18.15■□□□□ 0.5
COL6A1-204ENST00000486023 CADM4Q8NFZ8 388 aa18.15■□□□□ 0.5
COL6A1-204ENST00000486023 NAP1L5Q96NT1 182 aaPredicted RBP18.15■□□□□ 0.5
COL6A1-204ENST00000486023 CACNA1AO00555 2505 aa18.15■□□□□ 0.5
COL6A1-204ENST00000486023 A0A1W2PP55 124 aa18.14■□□□□ 0.49
COL6A1-204ENST00000486023 TM4SF5O14894 197 aa18.14■□□□□ 0.49
COL6A1-204ENST00000486023 SEMA4FO95754 770 aa18.14■□□□□ 0.49
COL6A1-204ENST00000486023 CALB1P05937 261 aa18.14■□□□□ 0.49
COL6A1-204ENST00000486023 OR1E1P30953 314 aa18.14■□□□□ 0.49
COL6A1-204ENST00000486023 SLC8A1P32418 973 aa18.14■□□□□ 0.49
COL6A1-204ENST00000486023 HOXD12P35452 270 aa18.14■□□□□ 0.49
COL6A1-204ENST00000486023 TPM4P67936 248 aa18.14■□□□□ 0.49
COL6A1-204ENST00000486023 ZBTB16Q05516 673 aa18.14■□□□□ 0.49
COL6A1-204ENST00000486023 KLHL40Q2TBA0 621 aa18.14■□□□□ 0.49
COL6A1-204ENST00000486023 ARL13BQ3SXY8 428 aa18.14■□□□□ 0.49
COL6A1-204ENST00000486023 PSAPL1Q6NUJ1 521 aa18.14■□□□□ 0.49
COL6A1-204ENST00000486023 RWDD4Q6NW29 188 aaKnown RBP18.14■□□□□ 0.49
COL6A1-204ENST00000486023 SCYL2Q6P3W7 929 aa18.14■□□□□ 0.49
COL6A1-204ENST00000486023 LUZP1Q86V48 1076 aa18.14■□□□□ 0.49
COL6A1-204ENST00000486023 HDDC3Q8N4P3 179 aa18.14■□□□□ 0.49
COL6A1-204ENST00000486023 KDM1BQ8NB78 822 aa18.14■□□□□ 0.49
COL6A1-204ENST00000486023 PTPRN2Q92932 1015 aa18.14■□□□□ 0.49
COL6A1-204ENST00000486023 PABPC3Q9H361 631 aaKnown RBP18.14■□□□□ 0.49
COL6A1-204ENST00000486023 CBX8Q9HC52 389 aa18.14■□□□□ 0.49
COL6A1-204ENST00000486023 SERGEFQ9UGK8 458 aa18.14■□□□□ 0.49
COL6A1-204ENST00000486023 SUSD2Q9UGT4 822 aa18.14■□□□□ 0.49
COL6A1-204ENST00000486023 NCOR2Q9Y618 2525 aa18.14■□□□□ 0.49
COL6A1-204ENST00000486023 LRRC53A6NM62 1247 aa18.13■□□□□ 0.49
COL6A1-204ENST00000486023 DRGXA6NNA5 263 aa18.13■□□□□ 0.49
COL6A1-204ENST00000486023 ARHGAP33O14559 1287 aa18.13■□□□□ 0.49
COL6A1-204ENST00000486023 GIPC1O14908 333 aa18.13■□□□□ 0.49
COL6A1-204ENST00000486023 SNAP91O60641 907 aa18.13■□□□□ 0.49
COL6A1-204ENST00000486023 KCNK5O95279 499 aa18.13■□□□□ 0.49
Retrieved 100 of 20,778 RNA–protein pairs in 35.7 ms