RNA–Protein interactions for RNA: ENST00000484087.5

BRCA1-216, Transcript of BRCA1, DNA repair associated, humanhuman

TSL 5

Gene BRCA1, Length 1,495 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
BRCA1-216ENST00000484087 GOLGA8KD6RF30 607 aa7.16□□□□□ -1.26
BRCA1-216ENST00000484087 TRIM24O15164 1050 aa7.16□□□□□ -1.26
BRCA1-216ENST00000484087 FBXO21O94952 628 aa7.16□□□□□ -1.26
BRCA1-216ENST00000484087 OLFM2O95897 454 aa7.16□□□□□ -1.26
BRCA1-216ENST00000484087 EGFP01133 1207 aa7.16□□□□□ -1.26
BRCA1-216ENST00000484087 LCP1P13796 627 aa7.16□□□□□ -1.26
BRCA1-216ENST00000484087 ITIH2P19823 946 aa7.16□□□□□ -1.26
BRCA1-216ENST00000484087 DDX6P26196 483 aaKnown RBP eCLIP7.16□□□□□ -1.26
BRCA1-216ENST00000484087 MIPP30301 263 aa7.16□□□□□ -1.26
BRCA1-216ENST00000484087 HSPA9P38646 679 aaKnown RBP7.16□□□□□ -1.26
BRCA1-216ENST00000484087 PTGIRP43119 386 aa7.16□□□□□ -1.26
BRCA1-216ENST00000484087 KCNJ1P48048 391 aa7.16□□□□□ -1.26
BRCA1-216ENST00000484087 IFNAR2P48551 515 aa7.16□□□□□ -1.26
BRCA1-216ENST00000484087 PLTPP55058 493 aa7.16□□□□□ -1.26
BRCA1-216ENST00000484087 FAM193AP78312 1265 aa7.16□□□□□ -1.26
BRCA1-216ENST00000484087 SATB1Q01826 763 aa7.16□□□□□ -1.26
BRCA1-216ENST00000484087 SLC25A11Q02978 314 aaKnown RBP7.16□□□□□ -1.26
BRCA1-216ENST00000484087 GABPB1Q06547 395 aaPredicted RBP7.16□□□□□ -1.26
BRCA1-216ENST00000484087 ZNF252P-AS1Q0IIN9 211 aa7.16□□□□□ -1.26
BRCA1-216ENST00000484087 ADIGQ0VDE8 80 aa7.16□□□□□ -1.26
BRCA1-216ENST00000484087 MTAPQ13126 283 aa7.16□□□□□ -1.26
BRCA1-216ENST00000484087 KLF1Q13351 362 aaPredicted RBP7.16□□□□□ -1.26
BRCA1-216ENST00000484087 RUNX3Q13761 415 aa7.16□□□□□ -1.26
BRCA1-216ENST00000484087 TFDP2Q14188 446 aa7.16□□□□□ -1.26
BRCA1-216ENST00000484087 KRT81Q14533 505 aa7.16□□□□□ -1.26
BRCA1-216ENST00000484087 SLMAPQ14BN4 828 aa7.16□□□□□ -1.26
BRCA1-216ENST00000484087 LLGL1Q15334 1064 aa7.16□□□□□ -1.26
BRCA1-216ENST00000484087 SIX1Q15475 284 aaPredicted RBP7.16□□□□□ -1.26
BRCA1-216ENST00000484087 GAB4Q2WGN9 574 aa7.16□□□□□ -1.26
BRCA1-216ENST00000484087 EML3Q32P44 896 aa7.16□□□□□ -1.26
BRCA1-216ENST00000484087 SPDYCQ5MJ68 293 aa7.16□□□□□ -1.26
BRCA1-216ENST00000484087 FSTL4Q6MZW2 842 aa7.16□□□□□ -1.26
BRCA1-216ENST00000484087 TTC27Q6P3X3 843 aa7.16□□□□□ -1.26
BRCA1-216ENST00000484087 OLFML1Q6UWY5 402 aa7.16□□□□□ -1.26
BRCA1-216ENST00000484087 MFSD7Q6UXD7 560 aa7.16□□□□□ -1.26
BRCA1-216ENST00000484087 ZNF852Q6ZMS4 543 aa7.16□□□□□ -1.26
BRCA1-216ENST00000484087 SLC26A9Q7LBE3 791 aa7.16□□□□□ -1.26
BRCA1-216ENST00000484087 ARCQ7LC44 396 aa7.16□□□□□ -1.26
BRCA1-216ENST00000484087 BHLHA9Q7RTU4 235 aa7.16□□□□□ -1.26
BRCA1-216ENST00000484087 DDX42Q86XP3 938 aaKnown RBP eCLIP7.16□□□□□ -1.26
BRCA1-216ENST00000484087 MIB1Q86YT6 1006 aa7.16□□□□□ -1.26
BRCA1-216ENST00000484087 BBS7Q8IWZ6 715 aa7.16□□□□□ -1.26
BRCA1-216ENST00000484087 TRAF3IP1Q8TDR0 691 aaPredicted RBP7.16□□□□□ -1.26
BRCA1-216ENST00000484087 UBLCP1Q8WVY7 318 aaPredicted RBP7.16□□□□□ -1.26
BRCA1-216ENST00000484087 HSPH1Q92598 858 aa7.16□□□□□ -1.26
BRCA1-216ENST00000484087 GLMNQ92990 594 aa7.16□□□□□ -1.26
BRCA1-216ENST00000484087 BHMTQ93088 406 aa7.16□□□□□ -1.26
BRCA1-216ENST00000484087 TBCBQ99426 244 aa7.16□□□□□ -1.26
BRCA1-216ENST00000484087 ULBP1Q9BZM6 244 aa7.16□□□□□ -1.26
BRCA1-216ENST00000484087 LMAN1LQ9HAT1 526 aa7.16□□□□□ -1.26
BRCA1-216ENST00000484087 KLHL11Q9NVR0 708 aa7.16□□□□□ -1.26
BRCA1-216ENST00000484087 WHRNQ9P202 907 aa7.16□□□□□ -1.26
BRCA1-216ENST00000484087 PCSK1NQ9UHG2 260 aa7.16□□□□□ -1.26
BRCA1-216ENST00000484087 USP18Q9UMW8 372 aa7.16□□□□□ -1.26
BRCA1-216ENST00000484087 ARHGAP26Q9UNA1 814 aa7.16□□□□□ -1.26
BRCA1-216ENST00000484087 SNX24Q9Y343 169 aa7.16□□□□□ -1.26
BRCA1-216ENST00000484087 ZFHX2Q9C0A1 2572 aaPredicted RBP7.16□□□□□ -1.26
BRCA1-216ENST00000484087 DCHS1Q96JQ0 3298 aa7.15□□□□□ -1.26
BRCA1-216ENST00000484087 LAMA1P25391 3075 aa7.15□□□□□ -1.26
BRCA1-216ENST00000484087 hCG_1818297A0A087WSY0 165 aa7.15□□□□□ -1.27
BRCA1-216ENST00000484087 FAM92AA1XBS5 289 aa7.15□□□□□ -1.27
BRCA1-216ENST00000484087 C3orf80F5H4A9 247 aa7.15□□□□□ -1.27
BRCA1-216ENST00000484087 POLR3GO15318 223 aaPredicted RBP7.15□□□□□ -1.27
BRCA1-216ENST00000484087 PAPSS1O43252 624 aaPredicted RBP7.15□□□□□ -1.27
BRCA1-216ENST00000484087 TLR5O60602 858 aa7.15□□□□□ -1.27
BRCA1-216ENST00000484087 GRAP2O75791 330 aa7.15□□□□□ -1.27
BRCA1-216ENST00000484087 RTN3O95197 1032 aaPredicted RBP7.15□□□□□ -1.27
BRCA1-216ENST00000484087 TRUB2O95900 331 aaKnown RBP7.15□□□□□ -1.27
BRCA1-216ENST00000484087 CYP17A1P05093 508 aa7.15□□□□□ -1.27
BRCA1-216ENST00000484087 ZDHHC11BP0C7U3 371 aa7.15□□□□□ -1.27
BRCA1-216ENST00000484087 CHRNB1P11230 501 aa7.15□□□□□ -1.27
BRCA1-216ENST00000484087 RARGP13631 454 aa7.15□□□□□ -1.27
BRCA1-216ENST00000484087 KDELR1P24390 212 aa7.15□□□□□ -1.27
BRCA1-216ENST00000484087 GJA4P35212 333 aa7.15□□□□□ -1.27
BRCA1-216ENST00000484087 ADCY8P40145 1251 aa7.15□□□□□ -1.27
BRCA1-216ENST00000484087 CDKN2BP42772 138 aa7.15□□□□□ -1.27
BRCA1-216ENST00000484087 PTPN9P43378 593 aa7.15□□□□□ -1.27
BRCA1-216ENST00000484087 SLC6A11P48066 632 aa7.15□□□□□ -1.27
BRCA1-216ENST00000484087 PXNP49023 591 aaPredicted RBP7.15□□□□□ -1.27
BRCA1-216ENST00000484087 TKTL1P51854 596 aa7.15□□□□□ -1.27
BRCA1-216ENST00000484087 SEC13P55735 322 aa7.15□□□□□ -1.27
BRCA1-216ENST00000484087 ATP11AP98196 1134 aa7.15□□□□□ -1.27
BRCA1-216ENST00000484087 KDSRQ06136 332 aa7.15□□□□□ -1.27
BRCA1-216ENST00000484087 DHX9Q08211 1270 aaKnown RBP7.15□□□□□ -1.27
BRCA1-216ENST00000484087 SRSF5Q13243 272 aaKnown RBP7.15□□□□□ -1.27
BRCA1-216ENST00000484087 PTK6Q13882 451 aa7.15□□□□□ -1.27
BRCA1-216ENST00000484087 BYSLQ13895 437 aaKnown RBP7.15□□□□□ -1.27
BRCA1-216ENST00000484087 PDK2Q15119 407 aa7.15□□□□□ -1.27
BRCA1-216ENST00000484087 QPCTQ16769 361 aa7.15□□□□□ -1.27
BRCA1-216ENST00000484087 CDO1Q16878 200 aa7.15□□□□□ -1.27
BRCA1-216ENST00000484087 SMTNL2Q2TAL5 461 aa7.15□□□□□ -1.27
BRCA1-216ENST00000484087 ITPRIPL2Q3MIP1 535 aa7.15□□□□□ -1.27
BRCA1-216ENST00000484087 GLIPR1L2Q4G1C9 344 aa7.15□□□□□ -1.27
BRCA1-216ENST00000484087 ATP13A4Q4VNC1 1196 aa7.15□□□□□ -1.27
BRCA1-216ENST00000484087 SCYL2Q6P3W7 929 aa7.15□□□□□ -1.27
BRCA1-216ENST00000484087 DRICH1Q6PGQ1 229 aaPredicted RBP7.15□□□□□ -1.27
BRCA1-216ENST00000484087 CROCCP2Q86T23 111 aa7.15□□□□□ -1.27
BRCA1-216ENST00000484087 RFX6Q8HWS3 928 aa7.15□□□□□ -1.27
BRCA1-216ENST00000484087 SCUBE3Q8IX30 993 aa7.15□□□□□ -1.27
BRCA1-216ENST00000484087 NAT16Q8N8M0 369 aa7.15□□□□□ -1.27
Retrieved 100 of 20,778 RNA–protein pairs in 10.1 ms