RNA–Protein interactions for RNA: ENST00000483617.5

PTPN18-212, Transcript of protein tyrosine phosphatase, non-receptor type 18, humanhuman

TSL 3

Gene PTPN18, Length 595 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTPN18-212ENST00000483617 RHOXF2Q9BQY4 288 aa11.73□□□□□ -0.53
PTPN18-212ENST00000483617 OSBPL2Q9H1P3 480 aa11.73□□□□□ -0.53
PTPN18-212ENST00000483617 EPC1Q9H2F5 836 aa11.73□□□□□ -0.53
PTPN18-212ENST00000483617 EBF3Q9H4W6 596 aa11.73□□□□□ -0.53
PTPN18-212ENST00000483617 ARGLU1Q9NWB6 273 aaPredicted RBP11.73□□□□□ -0.53
PTPN18-212ENST00000483617 SFMBT1Q9UHJ3 866 aa11.73□□□□□ -0.53
PTPN18-212ENST00000483617 SMG5Q9UPR3 1016 aaKnown RBP11.73□□□□□ -0.53
PTPN18-212ENST00000483617 TARSL2A2RTX5 802 aaKnown RBP11.72□□□□□ -0.53
PTPN18-212ENST00000483617 FAM187AA6NFU0 413 aa11.72□□□□□ -0.53
PTPN18-212ENST00000483617 OTOL1A6NHN0 477 aaPredicted RBP11.72□□□□□ -0.53
PTPN18-212ENST00000483617 C3orf70A6NLC5 250 aaPredicted RBP11.72□□□□□ -0.53
PTPN18-212ENST00000483617 APOC4-APOC2K7ER74 178 aa11.72□□□□□ -0.53
PTPN18-212ENST00000483617 CREB3O43889 395 aa11.72□□□□□ -0.53
PTPN18-212ENST00000483617 PAPSS2O95340 614 aaPredicted RBP11.72□□□□□ -0.53
PTPN18-212ENST00000483617 MOCS2O96007 188 aaPredicted RBP11.72□□□□□ -0.53
PTPN18-212ENST00000483617 APOC2P02655 101 aa11.72□□□□□ -0.53
PTPN18-212ENST00000483617 KRT10P13645 584 aa11.72□□□□□ -0.53
PTPN18-212ENST00000483617 ARSAP15289 507 aa11.72□□□□□ -0.53
PTPN18-212ENST00000483617 SERPINB6P35237 376 aa11.72□□□□□ -0.53
PTPN18-212ENST00000483617 HCAR3P49019 387 aa11.72□□□□□ -0.53
PTPN18-212ENST00000483617 SLC11A2P49281 568 aa11.72□□□□□ -0.53
PTPN18-212ENST00000483617 ATXN1P54253 815 aaKnown RBP11.72□□□□□ -0.53
PTPN18-212ENST00000483617 DYNLT1P63172 113 aa11.72□□□□□ -0.53
PTPN18-212ENST00000483617 PITX1P78337 314 aaPredicted RBP11.72□□□□□ -0.53
PTPN18-212ENST00000483617 DR1Q01658 176 aa11.72□□□□□ -0.53
PTPN18-212ENST00000483617 PDGFRLQ15198 375 aa11.72□□□□□ -0.53
PTPN18-212ENST00000483617 CYP1B1Q16678 543 aa11.72□□□□□ -0.53
PTPN18-212ENST00000483617 ERCC6LQ2NKX8 1250 aa11.72□□□□□ -0.53
PTPN18-212ENST00000483617 OTUD1Q5VV17 481 aaPredicted RBP11.72□□□□□ -0.53
PTPN18-212ENST00000483617 CCDC137Q6PK04 289 aaKnown RBP11.72□□□□□ -0.53
PTPN18-212ENST00000483617 SYDE1Q6ZW31 735 aaPredicted RBP11.72□□□□□ -0.53
PTPN18-212ENST00000483617 CYP4V2Q6ZWL3 525 aaPredicted RBP11.72□□□□□ -0.53
PTPN18-212ENST00000483617 GSTA5Q7RTV2 222 aa11.72□□□□□ -0.53
PTPN18-212ENST00000483617 SYNPOQ8N3V7 929 aa11.72□□□□□ -0.53
PTPN18-212ENST00000483617 C12orf50Q8NA57 414 aaPredicted RBP11.72□□□□□ -0.53
PTPN18-212ENST00000483617 NOA1Q8NC60 698 aaKnown RBP11.72□□□□□ -0.53
PTPN18-212ENST00000483617 ATL2Q8NHH9 583 aa11.72□□□□□ -0.53
PTPN18-212ENST00000483617 FAM71BQ8TC56 605 aa11.72□□□□□ -0.53
PTPN18-212ENST00000483617 PLD4Q96BZ4 506 aa11.72□□□□□ -0.53
PTPN18-212ENST00000483617 CHFRQ96EP1 664 aa11.72□□□□□ -0.53
PTPN18-212ENST00000483617 CCDC114Q96M63 670 aa11.72□□□□□ -0.53
PTPN18-212ENST00000483617 KCTD15Q96SI1 283 aaPredicted RBP11.72□□□□□ -0.53
PTPN18-212ENST00000483617 DCLK3Q9C098 648 aa11.72□□□□□ -0.53
PTPN18-212ENST00000483617 SIK2Q9H0K1 926 aa11.72□□□□□ -0.53
PTPN18-212ENST00000483617 DDX47Q9H0S4 455 aaKnown RBP11.72□□□□□ -0.53
PTPN18-212ENST00000483617 RAB17Q9H0T7 212 aa11.72□□□□□ -0.53
PTPN18-212ENST00000483617 LRRC19Q9H756 370 aa11.72□□□□□ -0.53
PTPN18-212ENST00000483617 CCSER2Q9H7U1 834 aa11.72□□□□□ -0.53
PTPN18-212ENST00000483617 ARHGEF38Q9NXL2 777 aa11.72□□□□□ -0.53
PTPN18-212ENST00000483617 OR12D3Q9UGF7 316 aa11.72□□□□□ -0.53
PTPN18-212ENST00000483617 NOL12Q9UGY1 213 aaKnown RBP eCLIP11.72□□□□□ -0.53
PTPN18-212ENST00000483617 NUDT5Q9UKK9 219 aa11.72□□□□□ -0.53
PTPN18-212ENST00000483617 UTP11Q9Y3A2 253 aaKnown RBP11.72□□□□□ -0.53
PTPN18-212ENST00000483617 V9GYY5 206 aaPredicted RBP11.72□□□□□ -0.53
PTPN18-212ENST00000483617 EP300Q09472 2414 aaPredicted RBP11.72□□□□□ -0.53
PTPN18-212ENST00000483617 ZNF292O60281 2723 aa11.71□□□□□ -0.53
PTPN18-212ENST00000483617 HELZP42694 1942 aaKnown RBP11.71□□□□□ -0.53
PTPN18-212ENST00000483617 ANAPC1Q9H1A4 1944 aa11.71□□□□□ -0.53
PTPN18-212ENST00000483617 C2orf78A6NCI8 922 aa11.71□□□□□ -0.53
PTPN18-212ENST00000483617 KCNU1A8MYU2 1149 aa11.71□□□□□ -0.53
PTPN18-212ENST00000483617 DYNC1I1O14576 645 aa11.71□□□□□ -0.53
PTPN18-212ENST00000483617 NDC80O14777 642 aa11.71□□□□□ -0.53
PTPN18-212ENST00000483617 MSI1O43347 362 aaKnown RBP11.71□□□□□ -0.53
PTPN18-212ENST00000483617 ERLIN1O75477 346 aa11.71□□□□□ -0.53
PTPN18-212ENST00000483617 ECEL1O95672 775 aa11.71□□□□□ -0.53
PTPN18-212ENST00000483617 MBL2P11226 248 aaPredicted RBP11.71□□□□□ -0.53
PTPN18-212ENST00000483617 TCF3P15923 654 aa11.71□□□□□ -0.53
PTPN18-212ENST00000483617 ACTN2P35609 894 aa11.71□□□□□ -0.53
PTPN18-212ENST00000483617 COILP38432 576 aaPredicted RBP11.71□□□□□ -0.53
PTPN18-212ENST00000483617 NR2C2P49116 596 aa11.71□□□□□ -0.53
PTPN18-212ENST00000483617 ARSEP51690 589 aa11.71□□□□□ -0.53
PTPN18-212ENST00000483617 KLF1Q13351 362 aaPredicted RBP11.71□□□□□ -0.53
PTPN18-212ENST00000483617 BYSLQ13895 437 aaKnown RBP11.71□□□□□ -0.53
PTPN18-212ENST00000483617 PPP1R7Q15435 360 aa11.71□□□□□ -0.53
PTPN18-212ENST00000483617 RAB6CQ53S08 254 aa11.71□□□□□ -0.53
PTPN18-212ENST00000483617 TMEM196Q5HYL7 178 aa11.71□□□□□ -0.53
PTPN18-212ENST00000483617 IFT20Q8IY31 132 aa11.71□□□□□ -0.53
PTPN18-212ENST00000483617 KIAA2013Q8IYS2 634 aa11.71□□□□□ -0.53
PTPN18-212ENST00000483617 CPA6Q8N4T0 437 aa11.71□□□□□ -0.53
PTPN18-212ENST00000483617 DCLK2Q8N568 766 aa11.71□□□□□ -0.53
PTPN18-212ENST00000483617 ARL14EPQ8N8R7 260 aaPredicted RBP11.71□□□□□ -0.53
PTPN18-212ENST00000483617 PRELID2Q8N945 189 aa11.71□□□□□ -0.53
PTPN18-212ENST00000483617 TTC16Q8NEE8 873 aa11.71□□□□□ -0.53
PTPN18-212ENST00000483617 CCHCR1Q8TD31 782 aa11.71□□□□□ -0.53
PTPN18-212ENST00000483617 OSCP1Q8WVF1 389 aa11.71□□□□□ -0.53
PTPN18-212ENST00000483617 C1orf54Q8WWF1 131 aa11.71□□□□□ -0.53
PTPN18-212ENST00000483617 TSC1Q92574 1164 aa11.71□□□□□ -0.53
PTPN18-212ENST00000483617 ATP2A3Q93084 1043 aa11.71□□□□□ -0.53
PTPN18-212ENST00000483617 CSPG4P5Q96PW8 444 aa11.71□□□□□ -0.53
PTPN18-212ENST00000483617 CYP2S1Q96SQ9 504 aa11.71□□□□□ -0.53
PTPN18-212ENST00000483617 RAB6CQ9H0N0 254 aa11.71□□□□□ -0.53
PTPN18-212ENST00000483617 CATSPERBQ9H7T0 1116 aa11.71□□□□□ -0.53
PTPN18-212ENST00000483617 OSER1Q9NX31 292 aa11.71□□□□□ -0.53
PTPN18-212ENST00000483617 NCDNQ9UBB6 729 aa11.71□□□□□ -0.53
PTPN18-212ENST00000483617 PCYOX1Q9UHG3 505 aa11.71□□□□□ -0.53
PTPN18-212ENST00000483617 LSM7Q9UK45 103 aaKnown RBP11.71□□□□□ -0.53
PTPN18-212ENST00000483617 ARHGAP26Q9UNA1 814 aa11.71□□□□□ -0.53
PTPN18-212ENST00000483617 ZNF148Q9UQR1 794 aa11.71□□□□□ -0.53
PTPN18-212ENST00000483617 RAD54BQ9Y620 910 aa11.71□□□□□ -0.53
PTPN18-212ENST00000483617 GPR179Q6PRD1 2367 aa11.71□□□□□ -0.54
Retrieved 100 of 20,778 RNA–protein pairs in 19.5 ms