RNA–Protein interactions for RNA: ENST00000482056.2

C9orf3-218, Transcript of chromosome 9 open reading frame 3, humanhuman

TSL 1 (best)

Gene C9orf3, Length 1,951 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
C9orf3-218ENST00000482056 YIPF3Q9GZM5 350 aa15.71■□□□□ 0.1
C9orf3-218ENST00000482056 CASS4Q9NQ75 786 aa15.71■□□□□ 0.1
C9orf3-218ENST00000482056 TMPRSS4Q9NRS4 437 aa15.71■□□□□ 0.1
C9orf3-218ENST00000482056 PIGVQ9NUD9 493 aa15.71■□□□□ 0.1
C9orf3-218ENST00000482056 NSMCE4AQ9NXX6 385 aa15.71■□□□□ 0.1
C9orf3-218ENST00000482056 DDX43Q9NXZ2 648 aaKnown RBP15.71■□□□□ 0.1
C9orf3-218ENST00000482056 RRN3Q9NYV6 651 aa15.71■□□□□ 0.1
C9orf3-218ENST00000482056 ZNF638Q14966 1978 aaKnown RBP15.7■□□□□ 0.1
C9orf3-218ENST00000482056 CLDN5O00501 218 aa15.7■□□□□ 0.1
C9orf3-218ENST00000482056 PRKCGP05129 697 aa15.7■□□□□ 0.1
C9orf3-218ENST00000482056 SERPINB6P35237 376 aa15.7■□□□□ 0.1
C9orf3-218ENST00000482056 SLC25A3Q00325 362 aa15.7■□□□□ 0.1
C9orf3-218ENST00000482056 PPIDQ08752 370 aaKnown RBP15.7■□□□□ 0.1
C9orf3-218ENST00000482056 SNX17Q15036 470 aa15.7■□□□□ 0.1
C9orf3-218ENST00000482056 ANKRD20A4Q4UJ75 823 aa15.7■□□□□ 0.1
C9orf3-218ENST00000482056 SYPL2Q5VXT5 272 aa15.7■□□□□ 0.1
C9orf3-218ENST00000482056 IZUMO2Q6UXV1 221 aa15.7■□□□□ 0.1
C9orf3-218ENST00000482056 CLEC20AQ6ZU45 233 aa15.7■□□□□ 0.1
C9orf3-218ENST00000482056 TMEM135Q86UB9 458 aa15.7■□□□□ 0.1
C9orf3-218ENST00000482056 RSPH3Q86UC2 560 aa15.7■□□□□ 0.1
C9orf3-218ENST00000482056 NETO2Q8NC67 525 aa15.7■□□□□ 0.1
C9orf3-218ENST00000482056 TSNARE1Q96NA8 513 aa15.7■□□□□ 0.1
C9orf3-218ENST00000482056 FCRL3Q96P31 734 aaPredicted RBP15.7■□□□□ 0.1
C9orf3-218ENST00000482056 AGAP3Q96P47 875 aa15.7■□□□□ 0.1
C9orf3-218ENST00000482056 SYT15Q9BQS2 421 aa15.7■□□□□ 0.1
C9orf3-218ENST00000482056 GBA3Q9H227 469 aa15.7■□□□□ 0.1
C9orf3-218ENST00000482056 GOLGA2P5Q9HBQ8 144 aa15.7■□□□□ 0.1
C9orf3-218ENST00000482056 RNF181Q9P0P0 153 aa15.7■□□□□ 0.1
C9orf3-218ENST00000482056 MAP3K7CLP57077 242 aa15.69■□□□□ 0.1
C9orf3-218ENST00000482056 SOX4Q06945 474 aaPredicted RBP15.69■□□□□ 0.1
C9orf3-218ENST00000482056 PRPSAP1Q14558 356 aa15.69■□□□□ 0.1
C9orf3-218ENST00000482056 LDLRAD1Q5T700 205 aa15.69■□□□□ 0.1
C9orf3-218ENST00000482056 METTL21CQ5VZV1 264 aa15.69■□□□□ 0.1
C9orf3-218ENST00000482056 FSTL4Q6MZW2 842 aa15.69■□□□□ 0.1
C9orf3-218ENST00000482056 MAVSQ7Z434 540 aa15.69■□□□□ 0.1
C9orf3-218ENST00000482056 GPR142Q7Z601 462 aa15.69■□□□□ 0.1
C9orf3-218ENST00000482056 CMC1Q7Z7K0 106 aa15.69■□□□□ 0.1
C9orf3-218ENST00000482056 POU5F2Q8N7G0 328 aa15.69■□□□□ 0.1
C9orf3-218ENST00000482056 ACTRT2Q8TDY3 377 aa15.69■□□□□ 0.1
C9orf3-218ENST00000482056 UCMAQ8WVF2 138 aa15.69■□□□□ 0.1
C9orf3-218ENST00000482056 DNAJB3Q8WWF6 145 aa15.69■□□□□ 0.1
C9orf3-218ENST00000482056 CDH19Q9H159 772 aa15.69■□□□□ 0.1
C9orf3-218ENST00000482056 S100A14Q9HCY8 104 aa15.69■□□□□ 0.1
C9orf3-218ENST00000482056 IL1RAPL1Q9NZN1 696 aa15.69■□□□□ 0.1
C9orf3-218ENST00000482056 A0A096LPK6 155 aa15.69■□□□□ 0.1
C9orf3-218ENST00000482056 C9IYK1 514 aa15.69■□□□□ 0.1
C9orf3-218ENST00000482056 PSMD3O43242 534 aa15.69■□□□□ 0.1
C9orf3-218ENST00000482056 F2P00734 622 aa15.69■□□□□ 0.1
C9orf3-218ENST00000482056 F9P00740 461 aa15.69■□□□□ 0.1
C9orf3-218ENST00000482056 CYP2B6P20813 491 aa15.69■□□□□ 0.1
C9orf3-218ENST00000482056 DNAJB2P25686 324 aa15.69■□□□□ 0.1
C9orf3-218ENST00000482056 CRABP2P29373 138 aa15.69■□□□□ 0.1
C9orf3-218ENST00000482056 LRPAP1P30533 357 aa15.69■□□□□ 0.1
C9orf3-218ENST00000482056 NDUFV1P49821 464 aa15.69■□□□□ 0.1
C9orf3-218ENST00000482056 PRKAA2P54646 552 aa15.69■□□□□ 0.1
C9orf3-218ENST00000482056 GJA9P57773 515 aa15.69■□□□□ 0.1
C9orf3-218ENST00000482056 GRIK3Q13003 919 aa15.69■□□□□ 0.1
C9orf3-218ENST00000482056 MPP3Q13368 585 aa15.69■□□□□ 0.1
C9orf3-218ENST00000482056 GRB14Q14449 540 aa15.69■□□□□ 0.1
C9orf3-218ENST00000482056 SMAD1Q15797 465 aaKnown RBP15.69■□□□□ 0.1
C9orf3-218ENST00000482056 KCNMB4Q86W47 210 aa15.69■□□□□ 0.1
C9orf3-218ENST00000482056 GSTCDQ8NEC7 633 aa15.69■□□□□ 0.1
C9orf3-218ENST00000482056 URGCPQ8TCY9 931 aa15.69■□□□□ 0.1
C9orf3-218ENST00000482056 EPAS1Q99814 870 aa15.69■□□□□ 0.1
C9orf3-218ENST00000482056 ECSITQ9BQ95 431 aa15.69■□□□□ 0.1
C9orf3-218ENST00000482056 IL22Q9GZX6 179 aa15.69■□□□□ 0.1
C9orf3-218ENST00000482056 RNF39Q9H2S5 420 aa15.69■□□□□ 0.1
C9orf3-218ENST00000482056 CNGB3Q9NQW8 809 aa15.69■□□□□ 0.1
C9orf3-218ENST00000482056 PDP2Q9P2J9 529 aa15.69■□□□□ 0.1
C9orf3-218ENST00000482056 FBXW11Q9UKB1 542 aa15.69■□□□□ 0.1
C9orf3-218ENST00000482056 ARHGAP26Q9UNA1 814 aa15.69■□□□□ 0.1
C9orf3-218ENST00000482056 ANKRD6Q9Y2G4 727 aa15.69■□□□□ 0.1
C9orf3-218ENST00000482056 IPPQ9Y573 584 aa15.69■□□□□ 0.1
C9orf3-218ENST00000482056 TSC2P49815 1807 aa15.69■□□□□ 0.1
C9orf3-218ENST00000482056 ZNF195O14628 629 aa15.68■□□□□ 0.1
C9orf3-218ENST00000482056 DYNC1LI2O43237 492 aaPredicted RBP15.68■□□□□ 0.1
C9orf3-218ENST00000482056 TRIM13O60858 407 aa15.68■□□□□ 0.1
C9orf3-218ENST00000482056 BEST1O76090 585 aa15.68■□□□□ 0.1
C9orf3-218ENST00000482056 ACAT1P24752 427 aaKnown RBP15.68■□□□□ 0.1
C9orf3-218ENST00000482056 HK2P52789 917 aa15.68■□□□□ 0.1
C9orf3-218ENST00000482056 MFSD10Q14728 455 aa15.68■□□□□ 0.1
C9orf3-218ENST00000482056 UBXN11Q5T124 520 aa15.68■□□□□ 0.1
C9orf3-218ENST00000482056 WSCD1Q658N2 575 aa15.68■□□□□ 0.1
C9orf3-218ENST00000482056 OR6Y1Q8NGX8 325 aa15.68■□□□□ 0.1
C9orf3-218ENST00000482056 RDH11Q8TC12 318 aa15.68■□□□□ 0.1
C9orf3-218ENST00000482056 HDAC11Q96DB2 347 aa15.68■□□□□ 0.1
C9orf3-218ENST00000482056 ATXN7L3BQ96GX2 97 aa15.68■□□□□ 0.1
C9orf3-218ENST00000482056 PPP1R12CQ9BZL4 782 aa15.68■□□□□ 0.1
C9orf3-218ENST00000482056 ULBP1Q9BZM6 244 aa15.68■□□□□ 0.1
C9orf3-218ENST00000482056 NMRAL1Q9HBL8 299 aa15.68■□□□□ 0.1
C9orf3-218ENST00000482056 SLC24A3Q9HC58 644 aa15.68■□□□□ 0.1
C9orf3-218ENST00000482056 C20orf96Q9NUD7 363 aaPredicted RBP15.68■□□□□ 0.1
C9orf3-218ENST00000482056 ZCWPW2A0A1B0GU75 182 aa15.67■□□□□ 0.1
C9orf3-218ENST00000482056 SMIM24O75264 130 aa15.67■□□□□ 0.1
C9orf3-218ENST00000482056 USP12O75317 370 aa15.67■□□□□ 0.1
C9orf3-218ENST00000482056 PSEN1P49768 467 aa15.67■□□□□ 0.1
C9orf3-218ENST00000482056 CACNA2D1P54289 1103 aa15.67■□□□□ 0.1
C9orf3-218ENST00000482056 EPHB1P54762 984 aa15.67■□□□□ 0.1
C9orf3-218ENST00000482056 DAOAP59103 153 aa15.67■□□□□ 0.1
C9orf3-218ENST00000482056 COG7P83436 770 aa15.67■□□□□ 0.1
Retrieved 100 of 20,778 RNA–protein pairs in 41 ms