RNA–Protein interactions for RNA: ENST00000479300.1

VCP-205, Transcript of valosin containing protein, humanhuman

TSL 1 (best)

Gene VCP, Length 559 nt, Biotype retained intron, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VCP-205ENST00000479300 PLD4Q96BZ4 506 aa6.91□□□□□ -1.3
VCP-205ENST00000479300 MRFAP1L1Q96HT8 127 aa6.91□□□□□ -1.3
VCP-205ENST00000479300 FAM81BQ96LP2 452 aa6.91□□□□□ -1.3
VCP-205ENST00000479300 FCRL3Q96P31 734 aaPredicted RBP6.91□□□□□ -1.3
VCP-205ENST00000479300 DDX50Q9BQ39 737 aaKnown RBP6.91□□□□□ -1.3
VCP-205ENST00000479300 ULBP1Q9BZM6 244 aa6.91□□□□□ -1.3
VCP-205ENST00000479300 SEMA4CQ9C0C4 833 aa6.91□□□□□ -1.3
VCP-205ENST00000479300 PCED1AQ9H1Q7 454 aa6.91□□□□□ -1.3
VCP-205ENST00000479300 TMEM245Q9H330 911 aa6.91□□□□□ -1.3
VCP-205ENST00000479300 DEF6Q9H4E7 631 aa6.91□□□□□ -1.3
VCP-205ENST00000479300 OSGEPQ9NPF4 335 aa6.91□□□□□ -1.3
VCP-205ENST00000479300 ABCC13Q9NSE7 274 aa6.91□□□□□ -1.3
VCP-205ENST00000479300 MARCH2Q9P0N8 246 aa6.91□□□□□ -1.3
VCP-205ENST00000479300 MAN1B1Q9UKM7 699 aa6.91□□□□□ -1.3
VCP-205ENST00000479300 TSPAN16Q9UKR8 245 aa6.91□□□□□ -1.3
VCP-205ENST00000479300 COQ4Q9Y3A0 265 aa6.91□□□□□ -1.3
VCP-205ENST00000479300 RRP15Q9Y3B9 282 aaKnown RBP6.91□□□□□ -1.3
VCP-205ENST00000479300 JRKLQ9Y4A0 524 aa6.91□□□□□ -1.3
VCP-205ENST00000479300 UTP18Q9Y5J1 556 aaKnown RBP eCLIP6.91□□□□□ -1.3
VCP-205ENST00000479300 PTPN13Q12923 2485 aa6.91□□□□□ -1.3
VCP-205ENST00000479300 SPTA1P02549 2419 aa6.9□□□□□ -1.3
VCP-205ENST00000479300 UBR5O95071 2799 aaPredicted RBP6.9□□□□□ -1.3
VCP-205ENST00000479300 PIEZO2Q9H5I5 2752 aa6.9□□□□□ -1.3
VCP-205ENST00000479300 A0A1B0GTQ1 180 aa6.9□□□□□ -1.3
VCP-205ENST00000479300 TYW5A2RUC4 315 aaKnown RBP6.9□□□□□ -1.3
VCP-205ENST00000479300 E9PAM4 449 aa6.9□□□□□ -1.3
VCP-205ENST00000479300 M0QYV0 167 aa6.9□□□□□ -1.3
VCP-205ENST00000479300 NPC1O15118 1278 aa6.9□□□□□ -1.3
VCP-205ENST00000479300 CCP110O43303 1012 aa6.9□□□□□ -1.3
VCP-205ENST00000479300 MED7O43513 233 aa6.9□□□□□ -1.3
VCP-205ENST00000479300 SYNCRIPO60506 623 aaKnown RBP6.9□□□□□ -1.3
VCP-205ENST00000479300 AFPP02771 609 aaKnown RBP6.9□□□□□ -1.3
VCP-205ENST00000479300 EPHX1P07099 455 aa6.9□□□□□ -1.3
VCP-205ENST00000479300 KRT5P13647 590 aa6.9□□□□□ -1.3
VCP-205ENST00000479300 LCP1P13796 627 aa6.9□□□□□ -1.3
VCP-205ENST00000479300 ACADVLP49748 655 aa6.9□□□□□ -1.3
VCP-205ENST00000479300 CCT8P50990 548 aa6.9□□□□□ -1.3
VCP-205ENST00000479300 ZNF132P52740 706 aa6.9□□□□□ -1.3
VCP-205ENST00000479300 STX17P56962 302 aa6.9□□□□□ -1.3
VCP-205ENST00000479300 GSDMDP57764 484 aa6.9□□□□□ -1.3
VCP-205ENST00000479300 MCCD1P59942 119 aaPredicted RBP6.9□□□□□ -1.3
VCP-205ENST00000479300 RPS14P62263 151 aaKnown RBP6.9□□□□□ -1.3
VCP-205ENST00000479300 TLE3Q04726 772 aa6.9□□□□□ -1.3
VCP-205ENST00000479300 ADIGQ0VDE8 80 aa6.9□□□□□ -1.3
VCP-205ENST00000479300 TARDBPQ13148 414 aaKnown RBP eCLIP6.9□□□□□ -1.3
VCP-205ENST00000479300 KCNJ12Q14500 433 aa6.9□□□□□ -1.3
VCP-205ENST00000479300 RTP5Q14D33 572 aa6.9□□□□□ -1.3
VCP-205ENST00000479300 MPPE1Q53F39 396 aa6.9□□□□□ -1.3
VCP-205ENST00000479300 FBXL19Q6PCT2 694 aa6.9□□□□□ -1.3
VCP-205ENST00000479300 FOXR2Q6PJQ5 311 aa6.9□□□□□ -1.3
VCP-205ENST00000479300 ANKS1BQ7Z6G8 1248 aa6.9□□□□□ -1.3
VCP-205ENST00000479300 ZNF605Q86T29 641 aa6.9□□□□□ -1.3
VCP-205ENST00000479300 ERICH1Q86X53 443 aa6.9□□□□□ -1.3
VCP-205ENST00000479300 DENND1CQ8IV53 801 aa6.9□□□□□ -1.3
VCP-205ENST00000479300 FAM217AQ8IXS0 508 aa6.9□□□□□ -1.3
VCP-205ENST00000479300 C10orf67Q8IYJ2 551 aa6.9□□□□□ -1.3
VCP-205ENST00000479300 ZNF557Q8N988 423 aaPredicted RBP6.9□□□□□ -1.3
VCP-205ENST00000479300 LSM14AQ8ND56 463 aaKnown RBP6.9□□□□□ -1.3
VCP-205ENST00000479300 EHBP1Q8NDI1 1231 aa6.9□□□□□ -1.3
VCP-205ENST00000479300 NEK11Q8NG66 645 aa6.9□□□□□ -1.3
VCP-205ENST00000479300 OR2T3Q8NH03 318 aa6.9□□□□□ -1.3
VCP-205ENST00000479300 SNIP1Q8TAD8 396 aaKnown RBP6.9□□□□□ -1.3
VCP-205ENST00000479300 SPATA20Q8TB22 786 aa6.9□□□□□ -1.3
VCP-205ENST00000479300 UBA3Q8TBC4 463 aa6.9□□□□□ -1.3
VCP-205ENST00000479300 DDI1Q8WTU0 396 aa6.9□□□□□ -1.3
VCP-205ENST00000479300 CYB5D2Q8WUJ1 264 aa6.9□□□□□ -1.3
VCP-205ENST00000479300 SLC35C1Q96A29 364 aa6.9□□□□□ -1.3
VCP-205ENST00000479300 NXPE2Q96DL1 559 aa6.9□□□□□ -1.3
VCP-205ENST00000479300 SLC6A18Q96N87 628 aa6.9□□□□□ -1.3
VCP-205ENST00000479300 TACO1Q9BSH4 297 aaKnown RBP6.9□□□□□ -1.3
VCP-205ENST00000479300 TRIM62Q9BVG3 475 aa6.9□□□□□ -1.3
VCP-205ENST00000479300 SLC2A11Q9BYW1 496 aa6.9□□□□□ -1.3
VCP-205ENST00000479300 TRIM5Q9C035 493 aa6.9□□□□□ -1.3
VCP-205ENST00000479300 NUP62CLQ9H1M0 184 aa6.9□□□□□ -1.3
VCP-205ENST00000479300 LHX5Q9H2C1 402 aa6.9□□□□□ -1.3
VCP-205ENST00000479300 MTG2Q9H4K7 406 aa6.9□□□□□ -1.3
VCP-205ENST00000479300 CAAP1Q9H8G2 361 aa6.9□□□□□ -1.3
VCP-205ENST00000479300 CNGB3Q9NQW8 809 aa6.9□□□□□ -1.3
VCP-205ENST00000479300 ST7Q9NRC1 585 aa6.9□□□□□ -1.3
VCP-205ENST00000479300 DONSONQ9NYP3 566 aa6.9□□□□□ -1.3
VCP-205ENST00000479300 FTSJ1Q9UET6 329 aa6.9□□□□□ -1.3
VCP-205ENST00000479300 SERGEFQ9UGK8 458 aa6.9□□□□□ -1.3
VCP-205ENST00000479300 AGO1Q9UL18 857 aaKnown RBP6.9□□□□□ -1.3
VCP-205ENST00000479300 HBS1LQ9Y450 684 aaKnown RBP6.9□□□□□ -1.3
VCP-205ENST00000479300 USP3Q9Y6I4 520 aa6.9□□□□□ -1.3
VCP-205ENST00000479300 ARID1BQ8NFD5 2236 aaPredicted RBP6.9□□□□□ -1.3
VCP-205ENST00000479300 COL6A6A6NMZ7 2263 aa6.9□□□□□ -1.31
VCP-205ENST00000479300 J3QKU1 62 aa6.89□□□□□ -1.31
VCP-205ENST00000479300 ENC1O14682 589 aa6.89□□□□□ -1.31
VCP-205ENST00000479300 PMM2O15305 246 aa6.89□□□□□ -1.31
VCP-205ENST00000479300 SART1O43290 800 aaKnown RBP6.89□□□□□ -1.31
VCP-205ENST00000479300 TIMM44O43615 452 aa6.89□□□□□ -1.31
VCP-205ENST00000479300 BRINP1O60477 761 aa6.89□□□□□ -1.31
VCP-205ENST00000479300 FBXO21O94952 628 aa6.89□□□□□ -1.31
VCP-205ENST00000479300 FSBPO95073 299 aa6.89□□□□□ -1.31
VCP-205ENST00000479300 SEMA4FO95754 770 aa6.89□□□□□ -1.31
VCP-205ENST00000479300 ACADMP11310 421 aa6.89□□□□□ -1.31
VCP-205ENST00000479300 KRT10P13645 584 aa6.89□□□□□ -1.31
VCP-205ENST00000479300 CD27P26842 260 aa6.89□□□□□ -1.31
VCP-205ENST00000479300 HOXD9P28356 352 aaPredicted RBP6.89□□□□□ -1.31
Retrieved 100 of 20,778 RNA–protein pairs in 37.1 ms