RNA–Protein interactions for RNA: ENST00000478531.5

BRCA1-215, Transcript of BRCA1, DNA repair associated, humanhuman

TSL 1 (best)

Gene BRCA1, Length 1,972 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
BRCA1-215ENST00000478531 GOLGA6L3A6NEY3 463 aa7.09□□□□□ -1.27
BRCA1-215ENST00000478531 PAPSS2O95340 614 aaPredicted RBP7.09□□□□□ -1.27
BRCA1-215ENST00000478531 APBB3O95704 486 aa7.09□□□□□ -1.27
BRCA1-215ENST00000478531 ATP5BP06576 529 aaKnown RBP7.09□□□□□ -1.27
BRCA1-215ENST00000478531 EPHX1P07099 455 aa7.09□□□□□ -1.27
BRCA1-215ENST00000478531 DLDP09622 509 aaKnown RBP7.09□□□□□ -1.27
BRCA1-215ENST00000478531 TMEM253P0C7T8 217 aa7.09□□□□□ -1.27
BRCA1-215ENST00000478531 TDGF1P13385 188 aa7.09□□□□□ -1.27
BRCA1-215ENST00000478531 PRKCHP24723 683 aa7.09□□□□□ -1.27
BRCA1-215ENST00000478531 EPHB2P29323 1055 aa7.09□□□□□ -1.27
BRCA1-215ENST00000478531 CYLC1P35663 651 aaPredicted RBP7.09□□□□□ -1.27
BRCA1-215ENST00000478531 STK19P49842 368 aaPredicted RBP7.09□□□□□ -1.27
BRCA1-215ENST00000478531 DGKEP52429 567 aa7.09□□□□□ -1.27
BRCA1-215ENST00000478531 NHLH1Q02575 133 aa7.09□□□□□ -1.27
BRCA1-215ENST00000478531 PIGHQ14442 188 aaPredicted RBP7.09□□□□□ -1.27
BRCA1-215ENST00000478531 GSE1Q14687 1217 aa7.09□□□□□ -1.27
BRCA1-215ENST00000478531 STARD3Q14849 445 aa7.09□□□□□ -1.27
BRCA1-215ENST00000478531 SPA17Q15506 151 aa7.09□□□□□ -1.27
BRCA1-215ENST00000478531 CA9Q16790 459 aa7.09□□□□□ -1.27
BRCA1-215ENST00000478531 C5orf22Q49AR2 442 aa7.09□□□□□ -1.27
BRCA1-215ENST00000478531 HSF5Q4G112 596 aaPredicted RBP7.09□□□□□ -1.27
BRCA1-215ENST00000478531 PPP6R3Q5H9R7 873 aaPredicted RBP7.09□□□□□ -1.27
BRCA1-215ENST00000478531 KCNT1Q5JUK3 1230 aa7.09□□□□□ -1.27
BRCA1-215ENST00000478531 ACBD5Q5T8D3 534 aaPredicted RBP7.09□□□□□ -1.27
BRCA1-215ENST00000478531 KIAA1211LQ6NV74 962 aa7.09□□□□□ -1.27
BRCA1-215ENST00000478531 ZC3H14Q6PJT7 736 aaKnown RBP7.09□□□□□ -1.27
BRCA1-215ENST00000478531 ARHGAP30Q7Z6I6 1101 aaPredicted RBP7.09□□□□□ -1.27
BRCA1-215ENST00000478531 CPNE8Q86YQ8 564 aa7.09□□□□□ -1.27
BRCA1-215ENST00000478531 ABCA7Q8IZY2 2146 aa7.09□□□□□ -1.27
BRCA1-215ENST00000478531 PGBD3Q8N328 593 aa7.09□□□□□ -1.27
BRCA1-215ENST00000478531 MDGA1Q8NFP4 955 aa7.09□□□□□ -1.27
BRCA1-215ENST00000478531 OR52K2Q8NGK3 314 aa7.09□□□□□ -1.27
BRCA1-215ENST00000478531 KCNV2Q8TDN2 545 aa7.09□□□□□ -1.27
BRCA1-215ENST00000478531 ATRIPQ8WXE1 791 aa7.09□□□□□ -1.27
BRCA1-215ENST00000478531 HSPH1Q92598 858 aa7.09□□□□□ -1.27
BRCA1-215ENST00000478531 LMLNQ96KR4 655 aa7.09□□□□□ -1.27
BRCA1-215ENST00000478531 RPL10LQ96L21 214 aaKnown RBP7.09□□□□□ -1.27
BRCA1-215ENST00000478531 EPAS1Q99814 870 aa7.09□□□□□ -1.27
BRCA1-215ENST00000478531 BAG1Q99933 345 aaPredicted RBP7.09□□□□□ -1.27
BRCA1-215ENST00000478531 OSBPL2Q9H1P3 480 aa7.09□□□□□ -1.27
BRCA1-215ENST00000478531 POLMQ9NP87 494 aaPredicted RBP7.09□□□□□ -1.27
BRCA1-215ENST00000478531 ZSCAN32Q9NX65 697 aa7.09□□□□□ -1.27
BRCA1-215ENST00000478531 IMPACTQ9P2X3 320 aa7.09□□□□□ -1.27
BRCA1-215ENST00000478531 UVRAGQ9P2Y5 699 aa7.09□□□□□ -1.27
BRCA1-215ENST00000478531 THAP10Q9P2Z0 257 aaPredicted RBP7.09□□□□□ -1.27
BRCA1-215ENST00000478531 IP6K2Q9UHH9 426 aa7.09□□□□□ -1.27
BRCA1-215ENST00000478531 DNAI1Q9UI46 699 aa7.09□□□□□ -1.27
BRCA1-215ENST00000478531 USP18Q9UMW8 372 aa7.09□□□□□ -1.27
BRCA1-215ENST00000478531 TFR2Q9UP52 801 aa7.09□□□□□ -1.27
BRCA1-215ENST00000478531 STON1Q9Y6Q2 735 aa7.09□□□□□ -1.27
BRCA1-215ENST00000478531 OTOGLQ3ZCN5 2332 aa7.09□□□□□ -1.27
BRCA1-215ENST00000478531 RALGAPA1Q6GYQ0 2036 aa7.08□□□□□ -1.28
BRCA1-215ENST00000478531 DNAH14Q0VDD8 3507 aa7.08□□□□□ -1.28
BRCA1-215ENST00000478531 A0A0D9SEW6 157 aa7.08□□□□□ -1.28
BRCA1-215ENST00000478531 DRGXA6NNA5 263 aa7.08□□□□□ -1.28
BRCA1-215ENST00000478531 TIMM44O43615 452 aa7.08□□□□□ -1.28
BRCA1-215ENST00000478531 SYNCRIPO60506 623 aaKnown RBP7.08□□□□□ -1.28
BRCA1-215ENST00000478531 ALDH1A2O94788 518 aa7.08□□□□□ -1.28
BRCA1-215ENST00000478531 IPO7O95373 1038 aaKnown RBP7.08□□□□□ -1.28
BRCA1-215ENST00000478531 IL1R2P27930 398 aa7.08□□□□□ -1.28
BRCA1-215ENST00000478531 MAGEA1P43355 309 aa7.08□□□□□ -1.28
BRCA1-215ENST00000478531 NRLP54845 237 aa7.08□□□□□ -1.28
BRCA1-215ENST00000478531 AIF1P55008 147 aa7.08□□□□□ -1.28
BRCA1-215ENST00000478531 TPI1P60174 286 aa7.08□□□□□ -1.28
BRCA1-215ENST00000478531 ST8SIA6P61647 398 aa7.08□□□□□ -1.28
BRCA1-215ENST00000478531 ECT2LQ008S8 904 aa7.08□□□□□ -1.28
BRCA1-215ENST00000478531 SRSF5Q13243 272 aaKnown RBP7.08□□□□□ -1.28
BRCA1-215ENST00000478531 MESDQ14696 234 aa7.08□□□□□ -1.28
BRCA1-215ENST00000478531 PTPRNQ16849 979 aa7.08□□□□□ -1.28
BRCA1-215ENST00000478531 ZNF528Q3MIS6 628 aa7.08□□□□□ -1.28
BRCA1-215ENST00000478531 C6orf118Q5T5N4 469 aa7.08□□□□□ -1.28
BRCA1-215ENST00000478531 ERMARDQ5T6L9 678 aa7.08□□□□□ -1.28
BRCA1-215ENST00000478531 MANEALQ5VSG8 457 aa7.08□□□□□ -1.28
BRCA1-215ENST00000478531 MAMSTRQ6ZN01 415 aa7.08□□□□□ -1.28
BRCA1-215ENST00000478531 CYP4V2Q6ZWL3 525 aaPredicted RBP7.08□□□□□ -1.28
BRCA1-215ENST00000478531 KIAA0907Q7Z7F0 614 aaPredicted RBP7.08□□□□□ -1.28
BRCA1-215ENST00000478531 ZNF354CQ86Y25 554 aa7.08□□□□□ -1.28
BRCA1-215ENST00000478531 TMTC1Q8IUR5 882 aa7.08□□□□□ -1.28
BRCA1-215ENST00000478531 CCDC170Q8IYT3 715 aa7.08□□□□□ -1.28
BRCA1-215ENST00000478531 SLC35G2Q8TBE7 412 aa7.08□□□□□ -1.28
BRCA1-215ENST00000478531 KCTD15Q96SI1 283 aaPredicted RBP7.08□□□□□ -1.28
BRCA1-215ENST00000478531 PHOX2BQ99453 314 aa7.08□□□□□ -1.28
BRCA1-215ENST00000478531 GABRG3Q99928 467 aa7.08□□□□□ -1.28
BRCA1-215ENST00000478531 FEM1AQ9BSK4 669 aa7.08□□□□□ -1.28
BRCA1-215ENST00000478531 IRF2BPLQ9H1B7 796 aa7.08□□□□□ -1.28
BRCA1-215ENST00000478531 SLC6A17Q9H1V8 727 aa7.08□□□□□ -1.28
BRCA1-215ENST00000478531 GRPEL1Q9HAV7 217 aa7.08□□□□□ -1.28
BRCA1-215ENST00000478531 STAU2Q9NUL3 570 aaKnown RBP eCLIP7.08□□□□□ -1.28
BRCA1-215ENST00000478531 NDFIP2Q9NV92 336 aa7.08□□□□□ -1.28
BRCA1-215ENST00000478531 KLHL11Q9NVR0 708 aa7.08□□□□□ -1.28
BRCA1-215ENST00000478531 PPARGC1AQ9UBK2 798 aaKnown RBP7.08□□□□□ -1.28
BRCA1-215ENST00000478531 NEU3Q9UQ49 428 aa7.08□□□□□ -1.28
BRCA1-215ENST00000478531 PLXND1Q9Y4D7 1925 aa7.08□□□□□ -1.28
BRCA1-215ENST00000478531 NUMA1Q14980 2115 aa7.08□□□□□ -1.28
BRCA1-215ENST00000478531 A0A1W2PQF6 199 aa7.08□□□□□ -1.28
BRCA1-215ENST00000478531 CBX4O00257 560 aa7.08□□□□□ -1.28
BRCA1-215ENST00000478531 EEF2KO00418 725 aaKnown RBP7.08□□□□□ -1.28
BRCA1-215ENST00000478531 NPC1O15118 1278 aa7.08□□□□□ -1.28
BRCA1-215ENST00000478531 AXIN1O15169 862 aa7.08□□□□□ -1.28
BRCA1-215ENST00000478531 ZBTB24O43167 697 aaPredicted RBP7.08□□□□□ -1.28
Retrieved 100 of 20,778 RNA–protein pairs in 17.2 ms