RNA–Protein interactions for RNA: ENST00000478095.1

HDAC6-222, Transcript of histone deacetylase 6, humanhuman

TSL 4

Gene HDAC6, Length 620 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HDAC6-222ENST00000478095 TSTD1Q8NFU3 115 aa10.57□□□□□ -0.72
HDAC6-222ENST00000478095 UCMAQ8WVF2 138 aa10.57□□□□□ -0.72
HDAC6-222ENST00000478095 PHOX2BQ99453 314 aa10.57□□□□□ -0.72
HDAC6-222ENST00000478095 SNRNP25Q9BV90 132 aaKnown RBP10.57□□□□□ -0.72
HDAC6-222ENST00000478095 ZYG11BQ9C0D3 744 aa10.57□□□□□ -0.72
HDAC6-222ENST00000478095 OSGEPQ9NPF4 335 aa10.57□□□□□ -0.72
HDAC6-222ENST00000478095 KIAA1522Q9P206 1035 aaPredicted RBP10.57□□□□□ -0.72
HDAC6-222ENST00000478095 THAP10Q9P2Z0 257 aaPredicted RBP10.57□□□□□ -0.72
HDAC6-222ENST00000478095 NEU3Q9UQ49 428 aa10.57□□□□□ -0.72
HDAC6-222ENST00000478095 STON1Q9Y6Q2 735 aa10.57□□□□□ -0.72
HDAC6-222ENST00000478095 IGLV3-10A0A075B6K4 115 aa10.56□□□□□ -0.72
HDAC6-222ENST00000478095 A0A1W2PQF6 199 aa10.56□□□□□ -0.72
HDAC6-222ENST00000478095 PRPSAP2O60256 369 aa10.56□□□□□ -0.72
HDAC6-222ENST00000478095 PAPSS2O95340 614 aaPredicted RBP10.56□□□□□ -0.72
HDAC6-222ENST00000478095 RHOCP08134 193 aa10.56□□□□□ -0.72
HDAC6-222ENST00000478095 HLA-EP13747 358 aa10.56□□□□□ -0.72
HDAC6-222ENST00000478095 PRKCHP24723 683 aa10.56□□□□□ -0.72
HDAC6-222ENST00000478095 IL1R2P27930 398 aa10.56□□□□□ -0.72
HDAC6-222ENST00000478095 SSR1P43307 286 aaKnown RBP10.56□□□□□ -0.72
HDAC6-222ENST00000478095 NHLH1Q02575 133 aa10.56□□□□□ -0.72
HDAC6-222ENST00000478095 SRSF5Q13243 272 aaKnown RBP10.56□□□□□ -0.72
HDAC6-222ENST00000478095 PTPRNQ16849 979 aa10.56□□□□□ -0.72
HDAC6-222ENST00000478095 SMTNL2Q2TAL5 461 aa10.56□□□□□ -0.72
HDAC6-222ENST00000478095 PLEKHG6Q3KR16 790 aa10.56□□□□□ -0.72
HDAC6-222ENST00000478095 ZNF528Q3MIS6 628 aa10.56□□□□□ -0.72
HDAC6-222ENST00000478095 HSF5Q4G112 596 aaPredicted RBP10.56□□□□□ -0.72
HDAC6-222ENST00000478095 KCNT1Q5JUK3 1230 aa10.56□□□□□ -0.72
HDAC6-222ENST00000478095 ACBD5Q5T8D3 534 aaPredicted RBP10.56□□□□□ -0.72
HDAC6-222ENST00000478095 RNF219Q5W0B1 726 aaPredicted RBP10.56□□□□□ -0.72
HDAC6-222ENST00000478095 SDE2Q6IQ49 451 aa10.56□□□□□ -0.72
HDAC6-222ENST00000478095 SERPINA13PQ6UXR4 307 aa10.56□□□□□ -0.72
HDAC6-222ENST00000478095 CYP4V2Q6ZWL3 525 aaPredicted RBP10.56□□□□□ -0.72
HDAC6-222ENST00000478095 ARHGAP30Q7Z6I6 1101 aaPredicted RBP10.56□□□□□ -0.72
HDAC6-222ENST00000478095 MDGA1Q8NFP4 955 aa10.56□□□□□ -0.72
HDAC6-222ENST00000478095 HMGB4Q8WW32 186 aa10.56□□□□□ -0.72
HDAC6-222ENST00000478095 TBC1D31Q96DN5 1066 aa10.56□□□□□ -0.72
HDAC6-222ENST00000478095 TPSD1Q9BZJ3 242 aa10.56□□□□□ -0.72
HDAC6-222ENST00000478095 MUC3BQ9H195 1237 aa10.56□□□□□ -0.72
HDAC6-222ENST00000478095 OSBPL2Q9H1P3 480 aa10.56□□□□□ -0.72
HDAC6-222ENST00000478095 SLC6A17Q9H1V8 727 aa10.56□□□□□ -0.72
HDAC6-222ENST00000478095 DHX35Q9H5Z1 703 aaKnown RBP10.56□□□□□ -0.72
HDAC6-222ENST00000478095 ZWILCHQ9H900 591 aa10.56□□□□□ -0.72
HDAC6-222ENST00000478095 IP6K2Q9UHH9 426 aa10.56□□□□□ -0.72
HDAC6-222ENST00000478095 VPS28Q9UK41 221 aa10.56□□□□□ -0.72
HDAC6-222ENST00000478095 USP18Q9UMW8 372 aa10.56□□□□□ -0.72
HDAC6-222ENST00000478095 TFR2Q9UP52 801 aa10.56□□□□□ -0.72
HDAC6-222ENST00000478095 AP4E1Q9UPM8 1137 aa10.56□□□□□ -0.72
HDAC6-222ENST00000478095 A0A0D9SEW6 157 aa10.55□□□□□ -0.72
HDAC6-222ENST00000478095 GOLGA6L3A6NEY3 463 aa10.55□□□□□ -0.72
HDAC6-222ENST00000478095 MYO1FO00160 1098 aa10.55□□□□□ -0.72
HDAC6-222ENST00000478095 TIMM44O43615 452 aa10.55□□□□□ -0.72
HDAC6-222ENST00000478095 MOCS3O95396 460 aa10.55□□□□□ -0.72
HDAC6-222ENST00000478095 APBB3O95704 486 aa10.55□□□□□ -0.72
HDAC6-222ENST00000478095 ATP5BP06576 529 aaKnown RBP10.55□□□□□ -0.72
HDAC6-222ENST00000478095 EPHX1P07099 455 aa10.55□□□□□ -0.72
HDAC6-222ENST00000478095 DLDP09622 509 aaKnown RBP10.55□□□□□ -0.72
HDAC6-222ENST00000478095 FECHP22830 423 aa10.55□□□□□ -0.72
HDAC6-222ENST00000478095 EPHB2P29323 1055 aa10.55□□□□□ -0.72
HDAC6-222ENST00000478095 OR1E1P30953 314 aa10.55□□□□□ -0.72
HDAC6-222ENST00000478095 L1CAMP32004 1257 aa10.55□□□□□ -0.72
HDAC6-222ENST00000478095 PCK1P35558 622 aa10.55□□□□□ -0.72
HDAC6-222ENST00000478095 CYLC1P35663 651 aaPredicted RBP10.55□□□□□ -0.72
HDAC6-222ENST00000478095 GJC1P36383 396 aa10.55□□□□□ -0.72
HDAC6-222ENST00000478095 MAGEA1P43355 309 aa10.55□□□□□ -0.72
HDAC6-222ENST00000478095 STK19P49842 368 aaPredicted RBP10.55□□□□□ -0.72
HDAC6-222ENST00000478095 DGKEP52429 567 aa10.55□□□□□ -0.72
HDAC6-222ENST00000478095 PIGHQ14442 188 aaPredicted RBP10.55□□□□□ -0.72
HDAC6-222ENST00000478095 C6orf118Q5T5N4 469 aa10.55□□□□□ -0.72
HDAC6-222ENST00000478095 TXNRD3NBQ6F5E7 133 aa10.55□□□□□ -0.72
HDAC6-222ENST00000478095 RAD9BQ6WBX8 426 aa10.55□□□□□ -0.72
HDAC6-222ENST00000478095 NLRP14Q86W24 1093 aa10.55□□□□□ -0.72
HDAC6-222ENST00000478095 CACUL1Q86Y37 369 aa10.55□□□□□ -0.72
HDAC6-222ENST00000478095 TMTC1Q8IUR5 882 aa10.55□□□□□ -0.72
HDAC6-222ENST00000478095 CCDC170Q8IYT3 715 aa10.55□□□□□ -0.72
HDAC6-222ENST00000478095 OR7D4Q8NG98 312 aa10.55□□□□□ -0.72
HDAC6-222ENST00000478095 SLC35G2Q8TBE7 412 aa10.55□□□□□ -0.72
HDAC6-222ENST00000478095 HSPH1Q92598 858 aa10.55□□□□□ -0.72
HDAC6-222ENST00000478095 TTC17Q96AE7 1141 aa10.55□□□□□ -0.72
HDAC6-222ENST00000478095 RPL10LQ96L21 214 aaKnown RBP10.55□□□□□ -0.72
HDAC6-222ENST00000478095 MRGPRX3Q96LB0 322 aa10.55□□□□□ -0.72
HDAC6-222ENST00000478095 KCTD15Q96SI1 283 aaPredicted RBP10.55□□□□□ -0.72
HDAC6-222ENST00000478095 GABRG3Q99928 467 aa10.55□□□□□ -0.72
HDAC6-222ENST00000478095 BAG1Q99933 345 aaPredicted RBP10.55□□□□□ -0.72
HDAC6-222ENST00000478095 MTG2Q9H4K7 406 aa10.55□□□□□ -0.72
HDAC6-222ENST00000478095 GRPEL1Q9HAV7 217 aa10.55□□□□□ -0.72
HDAC6-222ENST00000478095 POLMQ9NP87 494 aaPredicted RBP10.55□□□□□ -0.72
HDAC6-222ENST00000478095 NDFIP2Q9NV92 336 aa10.55□□□□□ -0.72
HDAC6-222ENST00000478095 ZSCAN32Q9NX65 697 aa10.55□□□□□ -0.72
HDAC6-222ENST00000478095 BCCIPQ9P287 314 aaKnown RBP eCLIP10.55□□□□□ -0.72
HDAC6-222ENST00000478095 IMPACTQ9P2X3 320 aa10.55□□□□□ -0.72
HDAC6-222ENST00000478095 UVRAGQ9P2Y5 699 aa10.55□□□□□ -0.72
HDAC6-222ENST00000478095 PPARGC1AQ9UBK2 798 aaKnown RBP10.55□□□□□ -0.72
HDAC6-222ENST00000478095 ZNF212Q9UDV6 495 aa10.55□□□□□ -0.72
HDAC6-222ENST00000478095 DNAI1Q9UI46 699 aa10.55□□□□□ -0.72
HDAC6-222ENST00000478095 PLA2G4CQ9UP65 541 aa10.55□□□□□ -0.72
HDAC6-222ENST00000478095 TBC1D30Q9Y2I9 924 aa10.55□□□□□ -0.72
HDAC6-222ENST00000478095 MYOFQ9NZM1 2061 aa10.54□□□□□ -0.72
HDAC6-222ENST00000478095 MUC6Q6W4X9 2439 aa10.54□□□□□ -0.72
HDAC6-222ENST00000478095 GOLGA6L6A8MZA4 724 aa10.54□□□□□ -0.72
HDAC6-222ENST00000478095 AXIN1O15169 862 aa10.54□□□□□ -0.72
Retrieved 100 of 20,778 RNA–protein pairs in 34.3 ms