RNA–Protein interactions for RNA: ENST00000477461.1

UBR3-209, Transcript of ubiquitin protein ligase E3 component n-recognin 3, humanhuman

TSL 4

Gene UBR3, Length 595 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
UBR3-209ENST00000477461 GJA10Q969M2 543 aa4.65□□□□□ -1.67
UBR3-209ENST00000477461 EME1Q96AY2 570 aa4.65□□□□□ -1.67
UBR3-209ENST00000477461 ZNF479Q96JC4 524 aa4.65□□□□□ -1.67
UBR3-209ENST00000477461 TESK2Q96S53 571 aa4.65□□□□□ -1.67
UBR3-209ENST00000477461 MYD88Q99836 296 aa4.65□□□□□ -1.67
UBR3-209ENST00000477461 SENP7Q9BQF6 1050 aa4.65□□□□□ -1.67
UBR3-209ENST00000477461 CDK19Q9BWU1 502 aa4.65□□□□□ -1.67
UBR3-209ENST00000477461 PAPOLBQ9NRJ5 636 aaKnown RBP4.65□□□□□ -1.67
UBR3-209ENST00000477461 IPO11Q9UI26 975 aaKnown RBP4.65□□□□□ -1.67
UBR3-209ENST00000477461 UTS2RQ9UKP6 389 aa4.65□□□□□ -1.67
UBR3-209ENST00000477461 NALCNQ8IZF0 1738 aa4.65□□□□□ -1.67
UBR3-209ENST00000477461 SIPA1L2Q9P2F8 1722 aaPredicted RBP4.65□□□□□ -1.67
UBR3-209ENST00000477461 ADGRB2O60241 1585 aa4.65□□□□□ -1.67
UBR3-209ENST00000477461 DISP3Q9P2K9 1392 aa4.65□□□□□ -1.67
UBR3-209ENST00000477461 ITSN1Q15811 1721 aa4.64□□□□□ -1.67
UBR3-209ENST00000477461 LRRC7Q96NW7 1537 aa4.64□□□□□ -1.67
UBR3-209ENST00000477461 TULP4Q9NRJ4 1543 aa4.64□□□□□ -1.67
UBR3-209ENST00000477461 PPAN-P2RY11A0A0B4J1V8 794 aaPredicted RBP4.64□□□□□ -1.67
UBR3-209ENST00000477461 ZSCAN9O15535 394 aaPredicted RBP4.64□□□□□ -1.67
UBR3-209ENST00000477461 SLC28A2O43868 658 aa4.64□□□□□ -1.67
UBR3-209ENST00000477461 CCNT2O60583 730 aaKnown RBP4.64□□□□□ -1.67
UBR3-209ENST00000477461 CHRNB1P11230 501 aa4.64□□□□□ -1.67
UBR3-209ENST00000477461 PLA2G2AP14555 144 aa4.64□□□□□ -1.67
UBR3-209ENST00000477461 TFEBP19484 476 aa4.64□□□□□ -1.67
UBR3-209ENST00000477461 HOXA11P31270 313 aaPredicted RBP4.64□□□□□ -1.67
UBR3-209ENST00000477461 SOX2P48431 317 aa4.64□□□□□ -1.67
UBR3-209ENST00000477461 NEK3P51956 506 aa4.64□□□□□ -1.67
UBR3-209ENST00000477461 P2RX3P56373 397 aa4.64□□□□□ -1.67
UBR3-209ENST00000477461 BTKQ06187 659 aa4.64□□□□□ -1.67
UBR3-209ENST00000477461 SEMA3BQ13214 749 aa4.64□□□□□ -1.67
UBR3-209ENST00000477461 INPP5JQ15735 1006 aaPredicted RBP4.64□□□□□ -1.67
UBR3-209ENST00000477461 LONRF1Q17RB8 773 aa4.64□□□□□ -1.67
UBR3-209ENST00000477461 SMTNL2Q2TAL5 461 aa4.64□□□□□ -1.67
UBR3-209ENST00000477461 DGKKQ5KSL6 1271 aa4.64□□□□□ -1.67
UBR3-209ENST00000477461 IZUMO3Q5VZ72 239 aa4.64□□□□□ -1.67
UBR3-209ENST00000477461 USP17L6PQ6QN14 398 aa4.64□□□□□ -1.67
UBR3-209ENST00000477461 OR2C3Q8N628 320 aa4.64□□□□□ -1.67
UBR3-209ENST00000477461 KAT2BQ92831 832 aa4.64□□□□□ -1.67
UBR3-209ENST00000477461 P2RY11Q96G91 374 aa4.64□□□□□ -1.67
UBR3-209ENST00000477461 TNIP3Q96KP6 325 aa4.64□□□□□ -1.67
UBR3-209ENST00000477461 CCDC138Q96M89 665 aa4.64□□□□□ -1.67
UBR3-209ENST00000477461 CTAGE1Q96RT6 745 aa4.64□□□□□ -1.67
UBR3-209ENST00000477461 GDF15Q99988 308 aa4.64□□□□□ -1.67
UBR3-209ENST00000477461 ELAC2Q9BQ52 826 aaKnown RBP4.64□□□□□ -1.67
UBR3-209ENST00000477461 SLCO5A1Q9H2Y9 848 aa4.64□□□□□ -1.67
UBR3-209ENST00000477461 CHST12Q9NRB3 414 aa4.64□□□□□ -1.67
UBR3-209ENST00000477461 THSD1Q9NS62 852 aa4.64□□□□□ -1.67
UBR3-209ENST00000477461 CDC42BPGQ6DT37 1551 aa4.64□□□□□ -1.67
UBR3-209ENST00000477461 KIF7Q2M1P5 1343 aa4.64□□□□□ -1.67
UBR3-209ENST00000477461 CCDC7Q96M83 1385 aa4.64□□□□□ -1.67
UBR3-209ENST00000477461 FMN2Q9NZ56 1722 aa4.63□□□□□ -1.67
UBR3-209ENST00000477461 XIRP1Q702N8 1843 aaKnown RBP4.63□□□□□ -1.67
UBR3-209ENST00000477461 A6NNC1 897 aa4.63□□□□□ -1.67
UBR3-209ENST00000477461 C4orf47A7E2U8 309 aa4.63□□□□□ -1.67
UBR3-209ENST00000477461 APOL1O14791 398 aa4.63□□□□□ -1.67
UBR3-209ENST00000477461 PRPF4O43172 522 aaKnown RBP eCLIP4.63□□□□□ -1.67
UBR3-209ENST00000477461 CBFA2T3O75081 653 aa4.63□□□□□ -1.67
UBR3-209ENST00000477461 ATG13O75143 517 aa4.63□□□□□ -1.67
UBR3-209ENST00000477461 ENO1P06733 434 aaKnown RBP4.63□□□□□ -1.67
UBR3-209ENST00000477461 NGFRP08138 427 aa4.63□□□□□ -1.67
UBR3-209ENST00000477461 MYL4P12829 197 aa4.63□□□□□ -1.67
UBR3-209ENST00000477461 TNFSF4P23510 183 aa4.63□□□□□ -1.67
UBR3-209ENST00000477461 TNFRSF8P28908 595 aa4.63□□□□□ -1.67
UBR3-209ENST00000477461 STAT6P42226 847 aa4.63□□□□□ -1.67
UBR3-209ENST00000477461 ZNF84P51523 738 aa4.63□□□□□ -1.67
UBR3-209ENST00000477461 DDX10Q13206 875 aaKnown RBP4.63□□□□□ -1.67
UBR3-209ENST00000477461 FAXCQ5TGI0 409 aa4.63□□□□□ -1.67
UBR3-209ENST00000477461 LIPMQ5VYY2 423 aa4.63□□□□□ -1.67
UBR3-209ENST00000477461 FAM90A2PQ658T7 463 aa4.63□□□□□ -1.67
UBR3-209ENST00000477461 SAMD3Q8N6K7 520 aa4.63□□□□□ -1.67
UBR3-209ENST00000477461 DEPTORQ8TB45 409 aa4.63□□□□□ -1.67
UBR3-209ENST00000477461 SGCZQ96LD1 299 aa4.63□□□□□ -1.67
UBR3-209ENST00000477461 RIPOR3Q96MK2 946 aa4.63□□□□□ -1.67
UBR3-209ENST00000477461 PIMREGQ9BSJ6 248 aa4.63□□□□□ -1.67
UBR3-209ENST00000477461 ZBTB26Q9HCK0 441 aa4.63□□□□□ -1.67
UBR3-209ENST00000477461 NLRC4Q9NPP4 1024 aa4.63□□□□□ -1.67
UBR3-209ENST00000477461 TERF2IPQ9NYB0 399 aa4.63□□□□□ -1.67
UBR3-209ENST00000477461 TMOD4Q9NZQ9 345 aa4.63□□□□□ -1.67
UBR3-209ENST00000477461 NINLQ9Y2I6 1382 aa4.63□□□□□ -1.67
UBR3-209ENST00000477461 RGPD8O14715 1765 aaPredicted RBP4.63□□□□□ -1.67
UBR3-209ENST00000477461 DCCP43146 1447 aa4.63□□□□□ -1.67
UBR3-209ENST00000477461 ANKARQ7Z5J8 1434 aa4.63□□□□□ -1.67
UBR3-209ENST00000477461 LTBP4Q8N2S1 1624 aa4.62□□□□□ -1.67
UBR3-209ENST00000477461 A0A0G2JK05 382 aa4.62□□□□□ -1.67
UBR3-209ENST00000477461 PRSS44E7EML9 344 aa4.62□□□□□ -1.67
UBR3-209ENST00000477461 H0YGN5 161 aa4.62□□□□□ -1.67
UBR3-209ENST00000477461 HOXB2P14652 356 aa4.62□□□□□ -1.67
UBR3-209ENST00000477461 ARRB2P32121 409 aa4.62□□□□□ -1.67
UBR3-209ENST00000477461 CIITAP33076 1130 aa4.62□□□□□ -1.67
UBR3-209ENST00000477461 POLD2P49005 469 aa4.62□□□□□ -1.67
UBR3-209ENST00000477461 GAD2Q05329 585 aa4.62□□□□□ -1.67
UBR3-209ENST00000477461 PGM5Q15124 567 aa4.62□□□□□ -1.67
UBR3-209ENST00000477461 ARL13BQ3SXY8 428 aa4.62□□□□□ -1.67
UBR3-209ENST00000477461 ANXA2RQ3ZCQ2 193 aa4.62□□□□□ -1.67
UBR3-209ENST00000477461 FAM209BQ5JX69 171 aa4.62□□□□□ -1.67
UBR3-209ENST00000477461 DLK2Q6UY11 383 aa4.62□□□□□ -1.67
UBR3-209ENST00000477461 TOGARAM2Q6ZUX3 1019 aa4.62□□□□□ -1.67
UBR3-209ENST00000477461 FAM186BQ8IYM0 893 aa4.62□□□□□ -1.67
UBR3-209ENST00000477461 CCDC33Q8N5R6 958 aa4.62□□□□□ -1.67
UBR3-209ENST00000477461 TMEM174Q8WUU8 243 aa4.62□□□□□ -1.67
Retrieved 100 of 20,778 RNA–protein pairs in 19.7 ms