RNA–Protein interactions for RNA: ENST00000477069.5

NUP188-205, Transcript of nucleoporin 188, humanhuman

TSL 1 (best)

Gene NUP188, Length 2,941 nt, Biotype retained intron, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NUP188-205ENST00000477069 CNTD1Q8N815 330 aa11.76□□□□□ -0.53
NUP188-205ENST00000477069 ARMC2Q8NEN0 867 aa11.76□□□□□ -0.53
NUP188-205ENST00000477069 RAB3IL1Q8TBN0 382 aa11.76□□□□□ -0.53
NUP188-205ENST00000477069 CDKL2Q92772 493 aa11.76□□□□□ -0.53
NUP188-205ENST00000477069 AGAP3Q96P47 875 aa11.76□□□□□ -0.53
NUP188-205ENST00000477069 SLC13A1Q9BZW2 595 aa11.76□□□□□ -0.53
NUP188-205ENST00000477069 IQCGQ9H095 443 aaKnown RBP11.76□□□□□ -0.53
NUP188-205ENST00000477069 OSER1Q9NX31 292 aa11.76□□□□□ -0.53
NUP188-205ENST00000477069 VANGL2Q9ULK5 521 aa11.76□□□□□ -0.53
NUP188-205ENST00000477069 DOCK4Q8N1I0 1966 aa11.76□□□□□ -0.53
NUP188-205ENST00000477069 KCNU1A8MYU2 1149 aa11.76□□□□□ -0.53
NUP188-205ENST00000477069 HGSO14964 777 aaPredicted RBP11.76□□□□□ -0.53
NUP188-205ENST00000477069 BIRC5O15392 142 aa11.76□□□□□ -0.53
NUP188-205ENST00000477069 AOC2O75106 756 aa11.76□□□□□ -0.53
NUP188-205ENST00000477069 USP12O75317 370 aa11.76□□□□□ -0.53
NUP188-205ENST00000477069 GRIK1P39086 918 aa11.76□□□□□ -0.53
NUP188-205ENST00000477069 RIPK1Q13546 671 aa11.76□□□□□ -0.53
NUP188-205ENST00000477069 PPP2R5DQ14738 602 aa11.76□□□□□ -0.53
NUP188-205ENST00000477069 NOMO2Q5JPE7 1267 aa11.76□□□□□ -0.53
NUP188-205ENST00000477069 AFMIDQ63HM1 303 aa11.76□□□□□ -0.53
NUP188-205ENST00000477069 ITPRIPL1Q6GPH6 555 aa11.76□□□□□ -0.53
NUP188-205ENST00000477069 ARHGAP36Q6ZRI8 547 aa11.76□□□□□ -0.53
NUP188-205ENST00000477069 STKLD1Q8NE28 680 aa11.76□□□□□ -0.53
NUP188-205ENST00000477069 KLHL29Q96CT2 875 aa11.76□□□□□ -0.53
NUP188-205ENST00000477069 CELF6Q96J87 481 aaKnown RBP11.76□□□□□ -0.53
NUP188-205ENST00000477069 C7orf26Q96N11 449 aa11.76□□□□□ -0.53
NUP188-205ENST00000477069 MCMBPQ9BTE3 642 aa11.76□□□□□ -0.53
NUP188-205ENST00000477069 TRIM55Q9BYV6 548 aa11.76□□□□□ -0.53
NUP188-205ENST00000477069 LRMDAQ9H2I8 198 aa11.76□□□□□ -0.53
NUP188-205ENST00000477069 LRRC40Q9H9A6 602 aa11.76□□□□□ -0.53
NUP188-205ENST00000477069 TXLNGQ9NUQ3 528 aa11.76□□□□□ -0.53
NUP188-205ENST00000477069 TBC1D13Q9NVG8 400 aa11.76□□□□□ -0.53
NUP188-205ENST00000477069 SFMBT1Q9UHJ3 866 aa11.76□□□□□ -0.53
NUP188-205ENST00000477069 RPS6KL1Q9Y6S9 549 aa11.76□□□□□ -0.53
NUP188-205ENST00000477069 TPP1O14773 563 aa11.76□□□□□ -0.53
NUP188-205ENST00000477069 MSI1O43347 362 aaKnown RBP11.76□□□□□ -0.53
NUP188-205ENST00000477069 SNNO75324 88 aaPredicted RBP11.76□□□□□ -0.53
NUP188-205ENST00000477069 PAGE1O75459 146 aa11.76□□□□□ -0.53
NUP188-205ENST00000477069 PRKCGP05129 697 aa11.76□□□□□ -0.53
NUP188-205ENST00000477069 BPGMP07738 259 aa11.76□□□□□ -0.53
NUP188-205ENST00000477069 ITGA2BP08514 1039 aa11.76□□□□□ -0.53
NUP188-205ENST00000477069 KRT16P08779 473 aa11.76□□□□□ -0.53
NUP188-205ENST00000477069 OCRLQ01968 901 aa11.76□□□□□ -0.53
NUP188-205ENST00000477069 NRG1Q02297 640 aaPredicted RBP11.76□□□□□ -0.53
NUP188-205ENST00000477069 PDE1CQ14123 709 aaPredicted RBP11.76□□□□□ -0.53
NUP188-205ENST00000477069 SLC39A12Q504Y0 691 aa11.76□□□□□ -0.53
NUP188-205ENST00000477069 RASSF3Q86WH2 238 aa11.76□□□□□ -0.53
NUP188-205ENST00000477069 SKA1Q96BD8 255 aa11.76□□□□□ -0.53
NUP188-205ENST00000477069 TSEN34Q9BSV6 310 aaKnown RBP11.76□□□□□ -0.53
NUP188-205ENST00000477069 CFHR5Q9BXR6 569 aa11.76□□□□□ -0.53
NUP188-205ENST00000477069 IL1RAPL1Q9NZN1 696 aa11.76□□□□□ -0.53
NUP188-205ENST00000477069 TTC3P53804 2025 aa11.75□□□□□ -0.53
NUP188-205ENST00000477069 PPAN-P2RY11A0A0B4J1V8 794 aaPredicted RBP11.75□□□□□ -0.53
NUP188-205ENST00000477069 DNAJC6O75061 913 aa11.75□□□□□ -0.53
NUP188-205ENST00000477069 ATP5HO75947 161 aa11.75□□□□□ -0.53
NUP188-205ENST00000477069 ERVK-10P10266 1014 aa11.75□□□□□ -0.53
NUP188-205ENST00000477069 CCNCP24863 283 aa11.75□□□□□ -0.53
NUP188-205ENST00000477069 CCR1P32246 355 aa11.75□□□□□ -0.53
NUP188-205ENST00000477069 DBN1Q16643 649 aa11.75□□□□□ -0.53
NUP188-205ENST00000477069 BTBD8Q5XKL5 378 aa11.75□□□□□ -0.53
NUP188-205ENST00000477069 LHX8Q68G74 356 aa11.75□□□□□ -0.53
NUP188-205ENST00000477069 CES3Q6UWW8 571 aa11.75□□□□□ -0.53
NUP188-205ENST00000477069 KIF2BQ8N4N8 673 aa11.75□□□□□ -0.53
NUP188-205ENST00000477069 CPNE1Q99829 537 aa11.75□□□□□ -0.53
NUP188-205ENST00000477069 DNAJB4Q9UDY4 337 aa11.75□□□□□ -0.53
NUP188-205ENST00000477069 FAM237BA0A1B0GVD1 139 aa11.75□□□□□ -0.53
NUP188-205ENST00000477069 A0A1W2PQ45 241 aaPredicted RBP11.75□□□□□ -0.53
NUP188-205ENST00000477069 A0A1W2PQH9 124 aa11.75□□□□□ -0.53
NUP188-205ENST00000477069 A0A1W2PQY0 241 aa11.75□□□□□ -0.53
NUP188-205ENST00000477069 ARHGAP42A6NI28 874 aa11.75□□□□□ -0.53
NUP188-205ENST00000477069 FGF10O15520 208 aaPredicted RBP11.75□□□□□ -0.53
NUP188-205ENST00000477069 ATP6V1G2O95670 118 aa11.75□□□□□ -0.53
NUP188-205ENST00000477069 SRGAP2BP0DMP2 458 aa11.75□□□□□ -0.53
NUP188-205ENST00000477069 COG7P83436 770 aa11.75□□□□□ -0.53
NUP188-205ENST00000477069 BST1Q10588 318 aa11.75□□□□□ -0.53
NUP188-205ENST00000477069 NOGQ13253 232 aa11.75□□□□□ -0.53
NUP188-205ENST00000477069 SNCBQ16143 134 aa11.75□□□□□ -0.53
NUP188-205ENST00000477069 TAF1BQ53T94 588 aaPredicted RBP11.75□□□□□ -0.53
NUP188-205ENST00000477069 MSANTD2Q6P1R3 559 aa11.75□□□□□ -0.53
NUP188-205ENST00000477069 KYAT3Q6YP21 454 aaKnown RBP11.75□□□□□ -0.53
NUP188-205ENST00000477069 CLNKQ7Z7G1 428 aa11.75□□□□□ -0.53
NUP188-205ENST00000477069 TRIM42Q8IWZ5 723 aa11.75□□□□□ -0.53
NUP188-205ENST00000477069 MAGEC3Q8TD91 643 aa11.75□□□□□ -0.53
NUP188-205ENST00000477069 RNF34Q969K3 372 aa11.75□□□□□ -0.53
NUP188-205ENST00000477069 UTP4Q969X6 686 aaKnown RBP11.75□□□□□ -0.53
NUP188-205ENST00000477069 SLC7A6OSQ96CW6 309 aaPredicted RBP11.75□□□□□ -0.53
NUP188-205ENST00000477069 FUBP3Q96I24 572 aaKnown RBP eCLIP11.75□□□□□ -0.53
NUP188-205ENST00000477069 GLT1D1Q96MS3 346 aa11.75□□□□□ -0.53
NUP188-205ENST00000477069 IL12RB2Q99665 862 aa11.75□□□□□ -0.53
NUP188-205ENST00000477069 DCTN4Q9UJW0 460 aa11.75□□□□□ -0.53
NUP188-205ENST00000477069 SCML2Q9UQR0 700 aa11.75□□□□□ -0.53
NUP188-205ENST00000477069 MAFKO60675 156 aa11.74□□□□□ -0.53
NUP188-205ENST00000477069 JCHAINP01591 159 aa11.74□□□□□ -0.53
NUP188-205ENST00000477069 TARSP26639 723 aaKnown RBP11.74□□□□□ -0.53
NUP188-205ENST00000477069 GP5P40197 560 aa11.74□□□□□ -0.53
NUP188-205ENST00000477069 HSF5Q4G112 596 aaPredicted RBP11.74□□□□□ -0.53
NUP188-205ENST00000477069 ANKRD20A4Q4UJ75 823 aa11.74□□□□□ -0.53
NUP188-205ENST00000477069 MTDHQ86UE4 582 aaKnown RBP11.74□□□□□ -0.53
NUP188-205ENST00000477069 ZNF683Q8IZ20 524 aa11.74□□□□□ -0.53
NUP188-205ENST00000477069 SERBP1Q8NC51 408 aaKnown RBP eCLIP11.74□□□□□ -0.53
Retrieved 100 of 20,778 RNA–protein pairs in 23.7 ms