RNA–Protein interactions for RNA: ENST00000475997.6

HNRNPU-208, Transcript of heterogeneous nuclear ribonucleoprotein U, human

TSL 5

Gene HNRNPU, Length 5,290 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Nucleus .

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RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
HNRNPU-208	ENST00000475997	KCTD2	Q14681	263 aa		6.22	□□□□□ -1.41
HNRNPU-208	ENST00000475997	PDK1	Q15118	436 aa		6.22	□□□□□ -1.41
HNRNPU-208	ENST00000475997	TNFAIP8L3	Q5GJ75	292 aa		6.22	□□□□□ -1.41
HNRNPU-208	ENST00000475997	MACC1	Q6ZN28	852 aa		6.22	□□□□□ -1.41
HNRNPU-208	ENST00000475997	RASSF6	Q6ZTQ3	369 aa		6.22	□□□□□ -1.41
HNRNPU-208	ENST00000475997	EIF3M	Q7L2H7	374 aa	Known RBP	6.22	□□□□□ -1.41
HNRNPU-208	ENST00000475997	PPP1R14A	Q96A00	147 aa		6.22	□□□□□ -1.41
HNRNPU-208	ENST00000475997	TMEM237	Q96Q45	408 aa		6.22	□□□□□ -1.41
HNRNPU-208	ENST00000475997	SLCO1B3	Q9NPD5	702 aa		6.22	□□□□□ -1.41
HNRNPU-208	ENST00000475997	NCKIPSD	Q9NZQ3	722 aa		6.22	□□□□□ -1.41
HNRNPU-208	ENST00000475997	TRIM17	Q9Y577	477 aa		6.22	□□□□□ -1.41
HNRNPU-208	ENST00000475997	WNT10B	O00744	389 aa		6.22	□□□□□ -1.41
HNRNPU-208	ENST00000475997	SMNDC1	O75940	238 aa	Known RBP eCLIP	6.22	□□□□□ -1.41	6e-7	■□□□□ 10.1
HNRNPU-208	ENST00000475997	CCNE2	O96020	404 aa		6.22	□□□□□ -1.41
HNRNPU-208	ENST00000475997	ZNF806	P0C7X5	589 aa		6.22	□□□□□ -1.41
HNRNPU-208	ENST00000475997	POU1F1	P28069	291 aa		6.22	□□□□□ -1.41
HNRNPU-208	ENST00000475997	ADSS	P30520	456 aa		6.22	□□□□□ -1.41
HNRNPU-208	ENST00000475997	FEN1	P39748	380 aa	Known RBP	6.22	□□□□□ -1.41
HNRNPU-208	ENST00000475997	EFNA5	P52803	228 aa		6.22	□□□□□ -1.41
HNRNPU-208	ENST00000475997	FKBP1A	P62942	108 aa	Known RBP	6.22	□□□□□ -1.41
HNRNPU-208	ENST00000475997	EIF2B5	Q13144	721 aa	Known RBP	6.22	□□□□□ -1.41
HNRNPU-208	ENST00000475997	KYAT1	Q16773	422 aa		6.22	□□□□□ -1.41
HNRNPU-208	ENST00000475997	CASP12	Q6UXS9	341 aa		6.22	□□□□□ -1.41
HNRNPU-208	ENST00000475997	ZDHHC13	Q8IUH4	622 aa		6.22	□□□□□ -1.41
HNRNPU-208	ENST00000475997	C12orf56	Q8IXR9	622 aa		6.22	□□□□□ -1.41
HNRNPU-208	ENST00000475997	IZUMO1	Q8IYV9	350 aa		6.22	□□□□□ -1.41
HNRNPU-208	ENST00000475997	C8orf59	Q8N0T1	100 aa	Predicted RBP	6.22	□□□□□ -1.41
HNRNPU-208	ENST00000475997	CLHC1	Q8NHS4	586 aa		6.22	□□□□□ -1.41
HNRNPU-208	ENST00000475997	OTUD5	Q96G74	571 aa		6.22	□□□□□ -1.41
HNRNPU-208	ENST00000475997	C2orf40	Q9H1Z8	148 aa		6.22	□□□□□ -1.41
HNRNPU-208	ENST00000475997	AASDHPPT	Q9NRN7	309 aa		6.22	□□□□□ -1.41
HNRNPU-208	ENST00000475997	CISH	Q9NSE2	258 aa		6.22	□□□□□ -1.41
HNRNPU-208	ENST00000475997	CDH9	Q9ULB4	789 aa		6.22	□□□□□ -1.41
HNRNPU-208	ENST00000475997	DMTF1	Q9Y222	760 aa		6.22	□□□□□ -1.41
HNRNPU-208	ENST00000475997	ATXN2	Q99700	1313 aa	Known RBP	6.22	□□□□□ -1.41
HNRNPU-208	ENST00000475997	FAM92A	A1XBS5	289 aa		6.22	□□□□□ -1.41
HNRNPU-208	ENST00000475997	SAGE2P	A6NJ88	616 aa		6.22	□□□□□ -1.41
HNRNPU-208	ENST00000475997	MDM4	O15151	490 aa		6.22	□□□□□ -1.41
HNRNPU-208	ENST00000475997	SSNA1	O43805	119 aa		6.22	□□□□□ -1.41
HNRNPU-208	ENST00000475997	BNIP3L	O60238	219 aa		6.22	□□□□□ -1.41
HNRNPU-208	ENST00000475997	PSMG1	O95456	288 aa		6.22	□□□□□ -1.41
HNRNPU-208	ENST00000475997	CLTB	P09497	229 aa		6.22	□□□□□ -1.41
HNRNPU-208	ENST00000475997	PRKAR1A	P10644	381 aa		6.22	□□□□□ -1.41
HNRNPU-208	ENST00000475997	PAICS	P22234	425 aa	Known RBP	6.22	□□□□□ -1.41
HNRNPU-208	ENST00000475997	RGS7	P49802	495 aa		6.22	□□□□□ -1.41
HNRNPU-208	ENST00000475997	VBP1	P61758	197 aa		6.22	□□□□□ -1.41
HNRNPU-208	ENST00000475997	CCNA1	P78396	465 aa		6.22	□□□□□ -1.41
HNRNPU-208	ENST00000475997	BTN3A2	P78410	334 aa		6.22	□□□□□ -1.41
HNRNPU-208	ENST00000475997	EN1	Q05925	392 aa	Predicted RBP	6.22	□□□□□ -1.41
HNRNPU-208	ENST00000475997	VAC14	Q08AM6	782 aa		6.22	□□□□□ -1.41
HNRNPU-208	ENST00000475997	MAMLD1	Q13495	774 aa		6.22	□□□□□ -1.41
HNRNPU-208	ENST00000475997	HIST2H2AC	Q16777	129 aa	Predicted RBP	6.22	□□□□□ -1.41
HNRNPU-208	ENST00000475997	AKIRIN2	Q53H80	203 aa		6.22	□□□□□ -1.41
HNRNPU-208	ENST00000475997	EAPP	Q56P03	285 aa	Predicted RBP	6.22	□□□□□ -1.41
HNRNPU-208	ENST00000475997	FAXC	Q5TGI0	409 aa		6.22	□□□□□ -1.41
HNRNPU-208	ENST00000475997	CWF19L1	Q69YN2	538 aa	Known RBP	6.22	□□□□□ -1.41
HNRNPU-208	ENST00000475997	HIST2H2AA3	Q6FI13	130 aa		6.22	□□□□□ -1.41
HNRNPU-208	ENST00000475997	UGT3A1	Q6NUS8	523 aa		6.22	□□□□□ -1.41
HNRNPU-208	ENST00000475997	XRRA1	Q6P2D8	792 aa		6.22	□□□□□ -1.41
HNRNPU-208	ENST00000475997	LINC00523	Q86TU6	105 aa		6.22	□□□□□ -1.41
HNRNPU-208	ENST00000475997	TRIM74	Q86UV6	250 aa		6.22	□□□□□ -1.41
HNRNPU-208	ENST00000475997	TRIM73	Q86UV7	250 aa		6.22	□□□□□ -1.41
HNRNPU-208	ENST00000475997	AGAP11	Q8TF27	550 aa		6.22	□□□□□ -1.41
HNRNPU-208	ENST00000475997	AP3S1	Q92572	193 aa		6.22	□□□□□ -1.41
HNRNPU-208	ENST00000475997	HPS1	Q92902	700 aa		6.22	□□□□□ -1.41
HNRNPU-208	ENST00000475997	SGF29	Q96ES7	293 aa		6.22	□□□□□ -1.41
HNRNPU-208	ENST00000475997	PLEKHG4B	Q96PX9	1271 aa		6.22	□□□□□ -1.41
HNRNPU-208	ENST00000475997	CAMKK2	Q96RR4	588 aa		6.22	□□□□□ -1.41
HNRNPU-208	ENST00000475997	CHCHD6	Q9BRQ6	235 aa		6.22	□□□□□ -1.41
HNRNPU-208	ENST00000475997	C8orf4	Q9NR00	106 aa		6.22	□□□□□ -1.41
HNRNPU-208	ENST00000475997	GIN1	Q9NXP7	522 aa		6.22	□□□□□ -1.41
HNRNPU-208	ENST00000475997	SH3BP4	Q9P0V3	963 aa		6.22	□□□□□ -1.41
HNRNPU-208	ENST00000475997	PIM2	Q9P1W9	311 aa		6.22	□□□□□ -1.41
HNRNPU-208	ENST00000475997	VTI1B	Q9UEU0	232 aa		6.22	□□□□□ -1.41
HNRNPU-208	ENST00000475997	ZNF221	Q9UK13	617 aa		6.22	□□□□□ -1.41
HNRNPU-208	ENST00000475997	CROT	Q9UKG9	612 aa		6.22	□□□□□ -1.41
HNRNPU-208	ENST00000475997	PCDHB8	Q9UN66	801 aa		6.22	□□□□□ -1.41
HNRNPU-208	ENST00000475997	SPEF1	Q9Y4P9	236 aa		6.22	□□□□□ -1.41
HNRNPU-208	ENST00000475997	BCLAF3	A2AJT9	711 aa	Known RBP	6.21	□□□□□ -1.41
HNRNPU-208	ENST00000475997	DYNC1LI2	O43237	492 aa	Predicted RBP	6.21	□□□□□ -1.41
HNRNPU-208	ENST00000475997	SERPINA1	P01009	418 aa		6.21	□□□□□ -1.41
HNRNPU-208	ENST00000475997	PAEP	P09466	180 aa		6.21	□□□□□ -1.41
HNRNPU-208	ENST00000475997	TSPAN19	P0C672	248 aa		6.21	□□□□□ -1.41
HNRNPU-208	ENST00000475997	RAG1	P15918	1043 aa		6.21	□□□□□ -1.41
HNRNPU-208	ENST00000475997	MSH3	P20585	1137 aa		6.21	□□□□□ -1.41
HNRNPU-208	ENST00000475997	PTPN7	P35236	360 aa		6.21	□□□□□ -1.41
HNRNPU-208	ENST00000475997	SERPINB5	P36952	375 aa		6.21	□□□□□ -1.41
HNRNPU-208	ENST00000475997	GUCA1A	P43080	201 aa	Predicted RBP	6.21	□□□□□ -1.41
HNRNPU-208	ENST00000475997	HNMT	P50135	292 aa		6.21	□□□□□ -1.41
HNRNPU-208	ENST00000475997	HIRA	P54198	1017 aa	Predicted RBP	6.21	□□□□□ -1.41
HNRNPU-208	ENST00000475997	C1QBP	Q07021	282 aa	Known RBP	6.21	□□□□□ -1.41
HNRNPU-208	ENST00000475997	TTLL9	Q3SXZ7	439 aa		6.21	□□□□□ -1.41
HNRNPU-208	ENST00000475997	NBPF12	Q5TAG4	269 aa	Predicted RBP	6.21	□□□□□ -1.41
HNRNPU-208	ENST00000475997	FAM83A	Q86UY5	434 aa		6.21	□□□□□ -1.41
HNRNPU-208	ENST00000475997	VSIG10L	Q86VR7	867 aa		6.21	□□□□□ -1.41
HNRNPU-208	ENST00000475997	FBXO36	Q8NEA4	188 aa		6.21	□□□□□ -1.41
HNRNPU-208	ENST00000475997	UBA3	Q8TBC4	463 aa		6.21	□□□□□ -1.41
HNRNPU-208	ENST00000475997	PLEKHO2	Q8TD55	490 aa		6.21	□□□□□ -1.41
HNRNPU-208	ENST00000475997	USP13	Q92995	863 aa	Predicted RBP	6.21	□□□□□ -1.41
HNRNPU-208	ENST00000475997	FAM120B	Q96EK7	910 aa	Known RBP	6.21	□□□□□ -1.41

Retrieved 100 of 20,778 RNA–protein pairs in 31.4 ms