RNA–Protein interactions for RNA: ENST00000475551.5

CCM2-207, Transcript of CCM2 scaffold protein, humanhuman

APPRIS ALT2 TSL 2 BASIC

Gene CCM2, Length 2,471 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCM2-207ENST00000475551 GP5P40197 560 aa18.11■□□□□ 0.49
CCM2-207ENST00000475551 RAP1GAPP47736 663 aa18.11■□□□□ 0.49
CCM2-207ENST00000475551 ART3Q13508 389 aa18.11■□□□□ 0.49
CCM2-207ENST00000475551 IL23RQ5VWK5 629 aa18.11■□□□□ 0.49
CCM2-207ENST00000475551 ZNF513Q8N8E2 541 aaPredicted RBP18.11■□□□□ 0.49
CCM2-207ENST00000475551 GIPC3Q8TF64 312 aa18.11■□□□□ 0.49
CCM2-207ENST00000475551 BCO2Q9BYV7 579 aa18.11■□□□□ 0.49
CCM2-207ENST00000475551 WDR55Q9H6Y2 383 aaPredicted RBP18.11■□□□□ 0.49
CCM2-207ENST00000475551 GPATCH2LQ9NWQ4 482 aa18.11■□□□□ 0.49
CCM2-207ENST00000475551 NXF1Q9UBU9 619 aaKnown RBP18.11■□□□□ 0.49
CCM2-207ENST00000475551 ADAM28Q9UKQ2 775 aa18.11■□□□□ 0.49
CCM2-207ENST00000475551 SLC8A2Q9UPR5 921 aa18.11■□□□□ 0.49
CCM2-207ENST00000475551 GOLGA8QA0A0J9YX86 632 aa18.11■□□□□ 0.49
CCM2-207ENST00000475551 GOLGA8OA6NCC3 632 aa18.11■□□□□ 0.49
CCM2-207ENST00000475551 GOLGA8NF8WBI6 632 aa18.11■□□□□ 0.49
CCM2-207ENST00000475551 WDR46O15213 610 aaKnown RBP18.11■□□□□ 0.49
CCM2-207ENST00000475551 HDAC3O15379 428 aa18.11■□□□□ 0.49
CCM2-207ENST00000475551 PDGFRBP09619 1106 aa18.11■□□□□ 0.49
CCM2-207ENST00000475551 TFAMQ00059 246 aaKnown RBP18.11■□□□□ 0.49
CCM2-207ENST00000475551 SP4Q02446 784 aa18.11■□□□□ 0.49
CCM2-207ENST00000475551 PTPN11Q06124 597 aaPredicted RBP18.11■□□□□ 0.49
CCM2-207ENST00000475551 CDO1Q16878 200 aa18.11■□□□□ 0.49
CCM2-207ENST00000475551 PDCD4Q53EL6 469 aaKnown RBP18.11■□□□□ 0.49
CCM2-207ENST00000475551 GRTP1Q5TC63 336 aa18.11■□□□□ 0.49
CCM2-207ENST00000475551 KRT80Q6KB66 452 aa18.11■□□□□ 0.49
CCM2-207ENST00000475551 RWDD4Q6NW29 188 aaKnown RBP18.11■□□□□ 0.49
CCM2-207ENST00000475551 NCCRP1Q6ZVX7 275 aaPredicted RBP18.11■□□□□ 0.49
CCM2-207ENST00000475551 TNS4Q8IZW8 715 aa18.11■□□□□ 0.49
CCM2-207ENST00000475551 GPC2Q8N158 579 aa18.11■□□□□ 0.49
CCM2-207ENST00000475551 RNF148Q8N7C7 305 aa18.11■□□□□ 0.49
CCM2-207ENST00000475551 ARNTL2Q8WYA1 636 aa18.11■□□□□ 0.49
CCM2-207ENST00000475551 PGBD4Q96DM1 585 aa18.11■□□□□ 0.49
CCM2-207ENST00000475551 WRNIP1Q96S55 665 aa18.11■□□□□ 0.49
CCM2-207ENST00000475551 TBCBQ99426 244 aa18.11■□□□□ 0.49
CCM2-207ENST00000475551 TUBA8Q9NY65 449 aaPredicted RBP18.11■□□□□ 0.49
CCM2-207ENST00000475551 TXNDC16Q9P2K2 825 aa18.11■□□□□ 0.49
CCM2-207ENST00000475551 TRIM38O00635 465 aa18.1■□□□□ 0.49
CCM2-207ENST00000475551 PFKPQ01813 784 aa18.1■□□□□ 0.49
CCM2-207ENST00000475551 MPP3Q13368 585 aa18.1■□□□□ 0.49
CCM2-207ENST00000475551 ZBTB33Q86T24 672 aa18.1■□□□□ 0.49
CCM2-207ENST00000475551 CNTD1Q8N815 330 aa18.1■□□□□ 0.49
CCM2-207ENST00000475551 CPNE1Q99829 537 aa18.1■□□□□ 0.49
CCM2-207ENST00000475551 TMEM79Q9BSE2 394 aa18.1■□□□□ 0.49
CCM2-207ENST00000475551 NAT9Q9BTE0 207 aa18.1■□□□□ 0.49
CCM2-207ENST00000475551 ZNF341Q9BYN7 854 aa18.1■□□□□ 0.49
CCM2-207ENST00000475551 CLK4Q9HAZ1 481 aaKnown RBP18.1■□□□□ 0.49
CCM2-207ENST00000475551 RAP2CQ9Y3L5 183 aa18.1■□□□□ 0.49
CCM2-207ENST00000475551 AP4S1Q9Y587 144 aa18.1■□□□□ 0.49
CCM2-207ENST00000475551 TRIM64CA6NLI5 447 aa18.1■□□□□ 0.49
CCM2-207ENST00000475551 FAM155AB1AL88 458 aaPredicted RBP18.1■□□□□ 0.49
CCM2-207ENST00000475551 M0QYV0 167 aa18.1■□□□□ 0.49
CCM2-207ENST00000475551 DGKIO75912 1065 aa18.1■□□□□ 0.49
CCM2-207ENST00000475551 HOXC6P09630 235 aa18.1■□□□□ 0.49
CCM2-207ENST00000475551 SUPT20HL2P0C7V6 817 aa18.1■□□□□ 0.49
CCM2-207ENST00000475551 P4HA1P13674 534 aa18.1■□□□□ 0.49
CCM2-207ENST00000475551 ZFXP17010 805 aaPredicted RBP18.1■□□□□ 0.49
CCM2-207ENST00000475551 RPS12P25398 132 aaKnown RBP18.1■□□□□ 0.49
CCM2-207ENST00000475551 NAA20P61599 178 aa18.1■□□□□ 0.49
CCM2-207ENST00000475551 SUPT20HL1Q3ZLR7 823 aa18.1■□□□□ 0.49
CCM2-207ENST00000475551 PPP6R3Q5H9R7 873 aaPredicted RBP18.1■□□□□ 0.49
CCM2-207ENST00000475551 SEL1L3Q68CR1 1132 aa18.1■□□□□ 0.49
CCM2-207ENST00000475551 SCYL2Q6P3W7 929 aa18.1■□□□□ 0.49
CCM2-207ENST00000475551 GPR180Q86V85 440 aa18.1■□□□□ 0.49
CCM2-207ENST00000475551 MICALL2Q8IY33 904 aa18.1■□□□□ 0.49
CCM2-207ENST00000475551 PLD6Q8N2A8 252 aaKnown RBP18.1■□□□□ 0.49
CCM2-207ENST00000475551 GRIN3AQ8TCU5 1115 aa18.1■□□□□ 0.49
CCM2-207ENST00000475551 SLC35B4Q969S0 331 aa18.1■□□□□ 0.49
CCM2-207ENST00000475551 ATP6V1E2Q96A05 226 aa18.1■□□□□ 0.49
CCM2-207ENST00000475551 ASB9Q96DX5 294 aa18.1■□□□□ 0.49
CCM2-207ENST00000475551 COX4I2Q96KJ9 171 aa18.1■□□□□ 0.49
CCM2-207ENST00000475551 INIPQ9NRY2 104 aa18.1■□□□□ 0.49
CCM2-207ENST00000475551 CPSF3Q9UKF6 684 aaKnown RBP18.1■□□□□ 0.49
CCM2-207ENST00000475551 CDH7Q9ULB5 785 aa18.1■□□□□ 0.49
CCM2-207ENST00000475551 GTF3C5Q9Y5Q8 519 aaPredicted RBP18.1■□□□□ 0.49
CCM2-207ENST00000475551 STX16-NPEPL1H3BU86 382 aa18.09■□□□□ 0.49
CCM2-207ENST00000475551 OGTO15294 1046 aa18.09■□□□□ 0.49
CCM2-207ENST00000475551 GMPRP36959 345 aa18.09■□□□□ 0.49
CCM2-207ENST00000475551 ATXN3P54252 364 aaPredicted RBP18.09■□□□□ 0.49
CCM2-207ENST00000475551 CRADDP78560 199 aa18.09■□□□□ 0.49
CCM2-207ENST00000475551 CA9Q16790 459 aa18.09■□□□□ 0.49
CCM2-207ENST00000475551 CCDC14Q49A88 953 aa18.09■□□□□ 0.49
CCM2-207ENST00000475551 MAMDC4Q6UXC1 1216 aa18.09■□□□□ 0.49
CCM2-207ENST00000475551 GPR141Q7Z602 305 aa18.09■□□□□ 0.49
CCM2-207ENST00000475551 ISOC1Q96CN7 298 aa18.09■□□□□ 0.49
CCM2-207ENST00000475551 QKIQ96PU8 341 aaKnown RBP eCLIP18.09■□□□□ 0.49
CCM2-207ENST00000475551 TCHPQ9BT92 498 aa18.09■□□□□ 0.49
CCM2-207ENST00000475551 SNRNP25Q9BV90 132 aaKnown RBP18.09■□□□□ 0.49
CCM2-207ENST00000475551 ANKRD60Q9BZ19 345 aa18.09■□□□□ 0.49
CCM2-207ENST00000475551 ZBTB26Q9HCK0 441 aa18.09■□□□□ 0.49
CCM2-207ENST00000475551 TBC1D23Q9NUY8 699 aa18.09■□□□□ 0.49
CCM2-207ENST00000475551 DPYSL4O14531 572 aa18.09■□□□□ 0.49
CCM2-207ENST00000475551 MDM4O15151 490 aa18.09■□□□□ 0.49
CCM2-207ENST00000475551 RGS20O76081 388 aa18.09■□□□□ 0.49
CCM2-207ENST00000475551 VAPBO95292 243 aa18.09■□□□□ 0.49
CCM2-207ENST00000475551 EGFRP00533 1210 aa18.09■□□□□ 0.49
CCM2-207ENST00000475551 TNNC2P02585 160 aa18.09■□□□□ 0.49
CCM2-207ENST00000475551 HMOX2P30519 316 aa18.09■□□□□ 0.49
CCM2-207ENST00000475551 PSMD8P48556 350 aa18.09■□□□□ 0.49
CCM2-207ENST00000475551 NR2C2P49116 596 aa18.09■□□□□ 0.49
CCM2-207ENST00000475551 RPL14P50914 215 aaKnown RBP18.09■□□□□ 0.49
Retrieved 100 of 20,778 RNA–protein pairs in 48.2 ms