RNA–Protein interactions for RNA: ENST00000475208.5

TMEM54-205, Transcript of transmembrane protein 54, humanhuman

TSL 1 (best)

Gene TMEM54, Length 768 nt, Biotype processed transcript, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TMEM54-205ENST00000475208 NUMBP49757 651 aa25.72■■□□□ 1.71
TMEM54-205ENST00000475208 NUCB2P80303 420 aa25.72■■□□□ 1.71
TMEM54-205ENST00000475208 SERAC1Q96JX3 654 aa25.72■■□□□ 1.71
TMEM54-205ENST00000475208 CNDP2Q96KP4 475 aaKnown RBP25.72■■□□□ 1.71
TMEM54-205ENST00000475208 SLC4A5Q9BY07 1137 aa25.72■■□□□ 1.71
TMEM54-205ENST00000475208 POPDC2Q9HBU9 364 aa25.72■■□□□ 1.71
TMEM54-205ENST00000475208 PCDHGA1Q9Y5H4 931 aa25.72■■□□□ 1.71
TMEM54-205ENST00000475208 URB1O60287 2271 aaKnown RBP25.71■■□□□ 1.71
TMEM54-205ENST00000475208 E5RJQ4 531 aa25.71■■□□□ 1.71
TMEM54-205ENST00000475208 F5H5T6 163 aa25.71■■□□□ 1.71
TMEM54-205ENST00000475208 TRUB2O95900 331 aaKnown RBP25.71■■□□□ 1.71
TMEM54-205ENST00000475208 IL1BP01584 269 aa25.71■■□□□ 1.71
TMEM54-205ENST00000475208 IGLV3-25P01717 112 aa25.71■■□□□ 1.71
TMEM54-205ENST00000475208 KCNH2Q12809 1159 aa25.71■■□□□ 1.71
TMEM54-205ENST00000475208 ELAVL3Q14576 367 aaKnown RBP25.71■■□□□ 1.71
TMEM54-205ENST00000475208 TMPRSS12Q86WS5 348 aa25.71■■□□□ 1.71
TMEM54-205ENST00000475208 SAP25Q8TEE9 199 aa25.71■■□□□ 1.71
TMEM54-205ENST00000475208 STK32AQ8WU08 396 aa25.71■■□□□ 1.71
TMEM54-205ENST00000475208 NELFBQ8WX92 580 aa25.71■■□□□ 1.71
TMEM54-205ENST00000475208 INTS2Q9H0H0 1204 aaKnown RBP25.71■■□□□ 1.71
TMEM54-205ENST00000475208 CYTH4Q9UIA0 394 aa25.71■■□□□ 1.71
TMEM54-205ENST00000475208 YKT6O15498 198 aa25.7■■□□□ 1.7
TMEM54-205ENST00000475208 MED7O43513 233 aa25.7■■□□□ 1.7
TMEM54-205ENST00000475208 LDOC1O95751 146 aaPredicted RBP25.7■■□□□ 1.7
TMEM54-205ENST00000475208 VAV1P15498 845 aa25.7■■□□□ 1.7
TMEM54-205ENST00000475208 PDGFRAP16234 1089 aa25.7■■□□□ 1.7
TMEM54-205ENST00000475208 NNMTP40261 264 aa25.7■■□□□ 1.7
TMEM54-205ENST00000475208 PPP2CBP62714 309 aa25.7■■□□□ 1.7
TMEM54-205ENST00000475208 PPP2CAP67775 309 aa25.7■■□□□ 1.7
TMEM54-205ENST00000475208 PITX1P78337 314 aaPredicted RBP25.7■■□□□ 1.7
TMEM54-205ENST00000475208 MEA1Q16626 185 aa25.7■■□□□ 1.7
TMEM54-205ENST00000475208 CIR1Q86X95 450 aaPredicted RBP25.7■■□□□ 1.7
TMEM54-205ENST00000475208 TRIM59Q8IWR1 403 aa25.7■■□□□ 1.7
TMEM54-205ENST00000475208 ATP6V0D2Q8N8Y2 350 aa25.7■■□□□ 1.7
TMEM54-205ENST00000475208 TPX2Q9ULW0 747 aaKnown RBP25.7■■□□□ 1.7
TMEM54-205ENST00000475208 CTNND2Q9UQB3 1225 aa25.7■■□□□ 1.7
TMEM54-205ENST00000475208 E9PAM4 449 aa25.69■■□□□ 1.7
TMEM54-205ENST00000475208 PLK4O00444 970 aa25.69■■□□□ 1.7
TMEM54-205ENST00000475208 RFPL3O75679 317 aa25.69■■□□□ 1.7
TMEM54-205ENST00000475208 LETM1O95202 739 aaPredicted RBP25.69■■□□□ 1.7
TMEM54-205ENST00000475208 AFPP02771 609 aaKnown RBP25.69■■□□□ 1.7
TMEM54-205ENST00000475208 EPHA8P29322 1005 aaPredicted RBP25.69■■□□□ 1.7
TMEM54-205ENST00000475208 DRD3P35462 400 aa25.69■■□□□ 1.7
TMEM54-205ENST00000475208 ARRB1P49407 418 aaPredicted RBP25.69■■□□□ 1.7
TMEM54-205ENST00000475208 YWHAZP63104 245 aaKnown RBP25.69■■□□□ 1.7
TMEM54-205ENST00000475208 DNAJC3Q13217 504 aa25.69■■□□□ 1.7
TMEM54-205ENST00000475208 SLC12A1Q13621 1099 aa25.69■■□□□ 1.7
TMEM54-205ENST00000475208 SLC45A4Q5BKX6 768 aa25.69■■□□□ 1.7
TMEM54-205ENST00000475208 FOXR2Q6PJQ5 311 aa25.69■■□□□ 1.7
TMEM54-205ENST00000475208 TMEM110Q86TL2 294 aa25.69■■□□□ 1.7
TMEM54-205ENST00000475208 CCAR2Q8N163 923 aaKnown RBP25.69■■□□□ 1.7
TMEM54-205ENST00000475208 MED15Q96RN5 788 aa25.69■■□□□ 1.7
TMEM54-205ENST00000475208 A0A087WV48 116 aa25.68■■□□□ 1.7
TMEM54-205ENST00000475208 BICDL2A1A5D9 508 aa25.68■■□□□ 1.7
TMEM54-205ENST00000475208 KCNU1A8MYU2 1149 aa25.68■■□□□ 1.7
TMEM54-205ENST00000475208 PPP1R3GB7ZBB8 358 aa25.68■■□□□ 1.7
TMEM54-205ENST00000475208 BMP6P22004 513 aa25.68■■□□□ 1.7
TMEM54-205ENST00000475208 METAP1P53582 386 aa25.68■■□□□ 1.7
TMEM54-205ENST00000475208 CLDN6P56747 220 aa25.68■■□□□ 1.7
TMEM54-205ENST00000475208 NXPH1P58417 271 aa25.68■■□□□ 1.7
TMEM54-205ENST00000475208 RAB11FIP1Q6WKZ4 1283 aaPredicted RBP25.68■■□□□ 1.7
TMEM54-205ENST00000475208 EID2Q8N6I1 236 aa25.68■■□□□ 1.7
TMEM54-205ENST00000475208 ZNF606Q8WXB4 792 aa25.68■■□□□ 1.7
TMEM54-205ENST00000475208 SPAG5Q96R06 1193 aa25.68■■□□□ 1.7
TMEM54-205ENST00000475208 PRMT1Q99873 361 aaKnown RBP25.68■■□□□ 1.7
TMEM54-205ENST00000475208 THAP9Q9H5L6 903 aa25.68■■□□□ 1.7
TMEM54-205ENST00000475208 FAM204AQ9H8W3 233 aa25.68■■□□□ 1.7
TMEM54-205ENST00000475208 UBE2TQ9NPD8 197 aaPredicted RBP25.68■■□□□ 1.7
TMEM54-205ENST00000475208 SLTMQ9NWH9 1034 aaKnown RBP eCLIP25.68■■□□□ 1.7
TMEM54-205ENST00000475208 SLC12A6Q9UHW9 1150 aa25.68■■□□□ 1.7
TMEM54-205ENST00000475208 UTP18Q9Y5J1 556 aaKnown RBP eCLIP25.68■■□□□ 1.7
TMEM54-205ENST00000475208 TBC1D3DA0A087WVF3 549 aa25.67■■□□□ 1.7
TMEM54-205ENST00000475208 TBC1D3IA0A087WXS9 549 aa25.67■■□□□ 1.7
TMEM54-205ENST00000475208 TBC1D3EA0A087X179 549 aa25.67■■□□□ 1.7
TMEM54-205ENST00000475208 TBC1D3KA0A087X1G2 549 aa25.67■■□□□ 1.7
TMEM54-205ENST00000475208 TBC1D3FA6NER0 549 aaPredicted RBP25.67■■□□□ 1.7
TMEM54-205ENST00000475208 TBC1D3LB9A6J9 549 aa25.67■■□□□ 1.7
TMEM54-205ENST00000475208 TLR4O00206 839 aa25.67■■□□□ 1.7
TMEM54-205ENST00000475208 THAP12O43422 761 aa25.67■■□□□ 1.7
TMEM54-205ENST00000475208 LATO43561 262 aa25.67■■□□□ 1.7
TMEM54-205ENST00000475208 GNA14O95837 355 aa25.67■■□□□ 1.7
TMEM54-205ENST00000475208 TBC1D3HP0C7X1 549 aa25.67■■□□□ 1.7
TMEM54-205ENST00000475208 GNA15P30679 374 aa25.67■■□□□ 1.7
TMEM54-205ENST00000475208 HNF1BP35680 557 aa25.67■■□□□ 1.7
TMEM54-205ENST00000475208 ACADVLP49748 655 aa25.67■■□□□ 1.7
TMEM54-205ENST00000475208 STX17P56962 302 aa25.67■■□□□ 1.7
TMEM54-205ENST00000475208 SULT2A1Q06520 285 aa25.67■■□□□ 1.7
TMEM54-205ENST00000475208 PDCLQ13371 301 aa25.67■■□□□ 1.7
TMEM54-205ENST00000475208 EIF4EBP2Q13542 120 aaPredicted RBP25.67■■□□□ 1.7
TMEM54-205ENST00000475208 TAF5Q15542 800 aa25.67■■□□□ 1.7
TMEM54-205ENST00000475208 TTC39BQ5VTQ0 682 aaPredicted RBP25.67■■□□□ 1.7
TMEM54-205ENST00000475208 TBC1D3GQ6DHY5 549 aa25.67■■□□□ 1.7
TMEM54-205ENST00000475208 TBC1D3CQ6IPX1 549 aa25.67■■□□□ 1.7
TMEM54-205ENST00000475208 NAPEPLDQ6IQ20 393 aa25.67■■□□□ 1.7
TMEM54-205ENST00000475208 TBC1D3Q8IZP1 549 aaPredicted RBP25.67■■□□□ 1.7
TMEM54-205ENST00000475208 FRS2Q8WU20 508 aa25.67■■□□□ 1.7
TMEM54-205ENST00000475208 ACP6Q9NPH0 428 aa25.67■■□□□ 1.7
TMEM54-205ENST00000475208 SMG1Q96Q15 3661 aaKnown RBP25.67■■□□□ 1.7
TMEM54-205ENST00000475208 SYNJ2BP-COX16A0A087WUM0 186 aa25.66■■□□□ 1.7
TMEM54-205ENST00000475208 A0A1B0GVM2 712 aa25.66■■□□□ 1.7
Retrieved 100 of 20,778 RNA–protein pairs in 21.7 ms