RNA–Protein interactions for RNA: ENST00000474896.1

SRRT-209, Transcript of serrate, RNA effector molecule, humanhuman

TSL 3

Gene SRRT, Length 726 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SRRT-209ENST00000474896 ST7Q9NRC1 585 aa16.15■□□□□ 0.18
SRRT-209ENST00000474896 TBC1D3DA0A087WVF3 549 aa16.14■□□□□ 0.17
SRRT-209ENST00000474896 TBC1D3IA0A087WXS9 549 aa16.14■□□□□ 0.17
SRRT-209ENST00000474896 TBC1D3EA0A087X179 549 aa16.14■□□□□ 0.17
SRRT-209ENST00000474896 TBC1D3KA0A087X1G2 549 aa16.14■□□□□ 0.17
SRRT-209ENST00000474896 TBC1D3FA6NER0 549 aaPredicted RBP16.14■□□□□ 0.17
SRRT-209ENST00000474896 TBC1D3LB9A6J9 549 aa16.14■□□□□ 0.17
SRRT-209ENST00000474896 TLR4O00206 839 aa16.14■□□□□ 0.17
SRRT-209ENST00000474896 CAPN9O14815 690 aa16.14■□□□□ 0.17
SRRT-209ENST00000474896 PMM2O15305 246 aa16.14■□□□□ 0.17
SRRT-209ENST00000474896 IL1BP01584 269 aa16.14■□□□□ 0.17
SRRT-209ENST00000474896 C1SP09871 688 aa16.14■□□□□ 0.17
SRRT-209ENST00000474896 TBC1D3HP0C7X1 549 aa16.14■□□□□ 0.17
SRRT-209ENST00000474896 TACR2P21452 398 aa16.14■□□□□ 0.17
SRRT-209ENST00000474896 C5AR1P21730 350 aa16.14■□□□□ 0.17
SRRT-209ENST00000474896 BMP6P22004 513 aa16.14■□□□□ 0.17
SRRT-209ENST00000474896 GPD2P43304 727 aa16.14■□□□□ 0.17
SRRT-209ENST00000474896 NUMBP49757 651 aa16.14■□□□□ 0.17
SRRT-209ENST00000474896 CETN1Q12798 172 aa16.14■□□□□ 0.17
SRRT-209ENST00000474896 BNIP3Q12983 259 aa16.14■□□□□ 0.17
SRRT-209ENST00000474896 NNTQ13423 1086 aa16.14■□□□□ 0.17
SRRT-209ENST00000474896 ZC3H12AQ5D1E8 599 aaKnown RBP16.14■□□□□ 0.17
SRRT-209ENST00000474896 RAP1GAP2Q684P5 730 aa16.14■□□□□ 0.17
SRRT-209ENST00000474896 TBC1D3GQ6DHY5 549 aa16.14■□□□□ 0.17
SRRT-209ENST00000474896 TBC1D3CQ6IPX1 549 aa16.14■□□□□ 0.17
SRRT-209ENST00000474896 RAB11FIP1Q6WKZ4 1283 aaPredicted RBP16.14■□□□□ 0.17
SRRT-209ENST00000474896 TBC1D3Q8IZP1 549 aaPredicted RBP16.14■□□□□ 0.17
SRRT-209ENST00000474896 TP53BP1Q12888 1972 aaPredicted RBP16.14■□□□□ 0.17
SRRT-209ENST00000474896 ITIH6Q6UXX5 1313 aa16.14■□□□□ 0.17
SRRT-209ENST00000474896 C10orf142B7Z368 130 aa16.13■□□□□ 0.17
SRRT-209ENST00000474896 RFPL3O75679 317 aa16.13■□□□□ 0.17
SRRT-209ENST00000474896 ADH1BP00325 375 aa16.13■□□□□ 0.17
SRRT-209ENST00000474896 CDK4P11802 303 aa16.13■□□□□ 0.17
SRRT-209ENST00000474896 HNF1BP35680 557 aa16.13■□□□□ 0.17
SRRT-209ENST00000474896 RPL34P49207 117 aaKnown RBP16.13■□□□□ 0.17
SRRT-209ENST00000474896 STK19P49842 368 aaPredicted RBP16.13■□□□□ 0.17
SRRT-209ENST00000474896 ADPRHP54922 357 aa16.13■□□□□ 0.17
SRRT-209ENST00000474896 CCDC40Q4G0X9 1142 aa16.13■□□□□ 0.17
SRRT-209ENST00000474896 SLC45A4Q5BKX6 768 aa16.13■□□□□ 0.17
SRRT-209ENST00000474896 C6orf118Q5T5N4 469 aa16.13■□□□□ 0.17
SRRT-209ENST00000474896 TAC4Q86UU9 113 aa16.13■□□□□ 0.17
SRRT-209ENST00000474896 ARHGEF19Q8IW93 802 aa16.13■□□□□ 0.17
SRRT-209ENST00000474896 EHBP1Q8NDI1 1231 aa16.13■□□□□ 0.17
SRRT-209ENST00000474896 CEP63Q96MT8 703 aa16.13■□□□□ 0.17
SRRT-209ENST00000474896 TJP2Q9UDY2 1190 aa16.13■□□□□ 0.17
SRRT-209ENST00000474896 YKT6O15498 198 aa16.12■□□□□ 0.17
SRRT-209ENST00000474896 SART1O43290 800 aaKnown RBP16.12■□□□□ 0.17
SRRT-209ENST00000474896 APOEP02649 317 aa16.12■□□□□ 0.17
SRRT-209ENST00000474896 VAV1P15498 845 aa16.12■□□□□ 0.17
SRRT-209ENST00000474896 NNMTP40261 264 aa16.12■□□□□ 0.17
SRRT-209ENST00000474896 ACADSBP45954 432 aa16.12■□□□□ 0.17
SRRT-209ENST00000474896 ARRB1P49407 418 aaPredicted RBP16.12■□□□□ 0.17
SRRT-209ENST00000474896 NXPH1P58417 271 aa16.12■□□□□ 0.17
SRRT-209ENST00000474896 TARDBPQ13148 414 aaKnown RBP eCLIP16.12■□□□□ 0.17
SRRT-209ENST00000474896 DENND1BQ6P3S1 775 aa16.12■□□□□ 0.17
SRRT-209ENST00000474896 BEND5Q7L4P6 421 aa16.12■□□□□ 0.17
SRRT-209ENST00000474896 CHSY1Q86X52 802 aa16.12■□□□□ 0.17
SRRT-209ENST00000474896 PIP4K2CQ8TBX8 421 aa16.12■□□□□ 0.17
SRRT-209ENST00000474896 DHTKD1Q96HY7 919 aaPredicted RBP16.12■□□□□ 0.17
SRRT-209ENST00000474896 AK5Q9Y6K8 562 aa16.12■□□□□ 0.17
SRRT-209ENST00000474896 COL5A1P20908 1838 aaPredicted RBP16.12■□□□□ 0.17
SRRT-209ENST00000474896 SHROOM3Q8TF72 1996 aa16.11■□□□□ 0.17
SRRT-209ENST00000474896 PSMA7O14818 248 aa16.11■□□□□ 0.17
SRRT-209ENST00000474896 P4HA2O15460 535 aa16.11■□□□□ 0.17
SRRT-209ENST00000474896 TRUB2O95900 331 aaKnown RBP16.11■□□□□ 0.17
SRRT-209ENST00000474896 CD44P16070 742 aaKnown RBP16.11■□□□□ 0.17
SRRT-209ENST00000474896 PDGFRAP16234 1089 aa16.11■□□□□ 0.17
SRRT-209ENST00000474896 ITPKBP27987 946 aa16.11■□□□□ 0.17
SRRT-209ENST00000474896 MZF1P28698 734 aaPredicted RBP16.11■□□□□ 0.17
SRRT-209ENST00000474896 EPHA8P29322 1005 aaPredicted RBP16.11■□□□□ 0.17
SRRT-209ENST00000474896 ABCG1P45844 678 aa16.11■□□□□ 0.17
SRRT-209ENST00000474896 ACADVLP49748 655 aa16.11■□□□□ 0.17
SRRT-209ENST00000474896 PPP2CBP62714 309 aa16.11■□□□□ 0.17
SRRT-209ENST00000474896 PPP2CAP67775 309 aa16.11■□□□□ 0.17
SRRT-209ENST00000474896 SEMG2Q02383 582 aa16.11■□□□□ 0.17
SRRT-209ENST00000474896 GCNT1Q02742 428 aa16.11■□□□□ 0.17
SRRT-209ENST00000474896 STIM1Q13586 685 aa16.11■□□□□ 0.17
SRRT-209ENST00000474896 SLC12A1Q13621 1099 aa16.11■□□□□ 0.17
SRRT-209ENST00000474896 ELAVL3Q14576 367 aaKnown RBP16.11■□□□□ 0.17
SRRT-209ENST00000474896 PRPF39Q86UA1 669 aaKnown RBP16.11■□□□□ 0.17
SRRT-209ENST00000474896 SPATS2Q86XZ4 545 aaKnown RBP16.11■□□□□ 0.17
SRRT-209ENST00000474896 MFSD2AQ8NA29 543 aa16.11■□□□□ 0.17
SRRT-209ENST00000474896 TSC1Q92574 1164 aa16.11■□□□□ 0.17
SRRT-209ENST00000474896 NXPE2Q96DL1 559 aa16.11■□□□□ 0.17
SRRT-209ENST00000474896 BTN2A3PQ96KV6 586 aa16.11■□□□□ 0.17
SRRT-209ENST00000474896 KREMEN1Q96MU8 473 aa16.11■□□□□ 0.17
SRRT-209ENST00000474896 SLC4A5Q9BY07 1137 aa16.11■□□□□ 0.17
SRRT-209ENST00000474896 ERVMER34-1Q9H9K5 563 aa16.11■□□□□ 0.17
SRRT-209ENST00000474896 SLC12A6Q9UHW9 1150 aa16.11■□□□□ 0.17
SRRT-209ENST00000474896 TPX2Q9ULW0 747 aaKnown RBP16.11■□□□□ 0.17
SRRT-209ENST00000474896 KCNU1A8MYU2 1149 aa16.1■□□□□ 0.17
SRRT-209ENST00000474896 PPP1R3GB7ZBB8 358 aa16.1■□□□□ 0.17
SRRT-209ENST00000474896 F5H5T6 163 aa16.1■□□□□ 0.17
SRRT-209ENST00000474896 LATO43561 262 aa16.1■□□□□ 0.17
SRRT-209ENST00000474896 RTN2O75298 545 aa16.1■□□□□ 0.17
SRRT-209ENST00000474896 KRT5P13647 590 aa16.1■□□□□ 0.17
SRRT-209ENST00000474896 MAT2AP31153 395 aaKnown RBP16.1■□□□□ 0.17
SRRT-209ENST00000474896 DRD3P35462 400 aa16.1■□□□□ 0.17
SRRT-209ENST00000474896 PPP1R2P41236 205 aa16.1■□□□□ 0.17
SRRT-209ENST00000474896 RXRGP48443 463 aa16.1■□□□□ 0.17
Retrieved 100 of 20,778 RNA–protein pairs in 32.4 ms