RNA–Protein interactions for RNA: ENST00000474839.5

SKIV2L-208, Transcript of Ski2 like RNA helicase, humanhuman

TSL 2

Gene SKIV2L, Length 3,378 nt, Biotype nonsense mediated decay.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SKIV2L-208ENST00000474839 TLK1Q9UKI8 766 aa12.35□□□□□ -0.43
SKIV2L-208ENST00000474839 SNX13Q9Y5W8 968 aa12.35□□□□□ -0.43
SKIV2L-208ENST00000474839 YBX3P16989 372 aaKnown RBP eCLIP12.35□□□□□ -0.43
SKIV2L-208ENST00000474839 CYLC2Q14093 348 aaPredicted RBP12.35□□□□□ -0.43
SKIV2L-208ENST00000474839 MXD4Q14582 209 aaPredicted RBP12.35□□□□□ -0.43
SKIV2L-208ENST00000474839 CERCAMQ5T4B2 595 aa12.35□□□□□ -0.43
SKIV2L-208ENST00000474839 KRT80Q6KB66 452 aa12.35□□□□□ -0.43
SKIV2L-208ENST00000474839 RPS27LQ71UM5 84 aaKnown RBP12.35□□□□□ -0.43
SKIV2L-208ENST00000474839 ZFP28Q8NHY6 868 aa12.35□□□□□ -0.43
SKIV2L-208ENST00000474839 GMLQ99445 158 aa12.35□□□□□ -0.43
SKIV2L-208ENST00000474839 SERPINI1Q99574 410 aa12.35□□□□□ -0.43
SKIV2L-208ENST00000474839 CCT7Q99832 543 aa12.35□□□□□ -0.43
SKIV2L-208ENST00000474839 DCUN1D5Q9BTE7 237 aa12.35□□□□□ -0.43
SKIV2L-208ENST00000474839 C1orf21Q9H246 121 aa12.35□□□□□ -0.43
SKIV2L-208ENST00000474839 CYP4F12Q9HCS2 524 aa12.35□□□□□ -0.43
SKIV2L-208ENST00000474839 PNPLA8Q9NP80 782 aa12.35□□□□□ -0.43
SKIV2L-208ENST00000474839 ITGA11Q9UKX5 1188 aa12.35□□□□□ -0.43
SKIV2L-208ENST00000474839 BARX2Q9UMQ3 279 aaPredicted RBP12.35□□□□□ -0.43
SKIV2L-208ENST00000474839 FAF1Q9UNN5 650 aaPredicted RBP12.35□□□□□ -0.43
SKIV2L-208ENST00000474839 CDY2AQ9Y6F7 541 aa12.35□□□□□ -0.43
SKIV2L-208ENST00000474839 CDY1Q9Y6F8 540 aa12.35□□□□□ -0.43
SKIV2L-208ENST00000474839 DOCK5Q9H7D0 1870 aa12.35□□□□□ -0.43
SKIV2L-208ENST00000474839 ACKR2O00590 384 aa12.35□□□□□ -0.43
SKIV2L-208ENST00000474839 CCNT2O60583 730 aaKnown RBP12.35□□□□□ -0.43
SKIV2L-208ENST00000474839 MS4A2Q01362 244 aa12.35□□□□□ -0.43
SKIV2L-208ENST00000474839 SLC6A3Q01959 620 aa12.35□□□□□ -0.43
SKIV2L-208ENST00000474839 TTC30AQ86WT1 665 aa12.35□□□□□ -0.43
SKIV2L-208ENST00000474839 FBXO16Q8IX29 292 aaPredicted RBP12.35□□□□□ -0.43
SKIV2L-208ENST00000474839 GRIN3AQ8TCU5 1115 aa12.35□□□□□ -0.43
SKIV2L-208ENST00000474839 JADE3Q92613 823 aa12.35□□□□□ -0.43
SKIV2L-208ENST00000474839 P2RY11Q96G91 374 aa12.35□□□□□ -0.43
SKIV2L-208ENST00000474839 CSPG4P5Q96PW8 444 aa12.35□□□□□ -0.43
SKIV2L-208ENST00000474839 KCTD15Q96SI1 283 aaPredicted RBP12.35□□□□□ -0.43
SKIV2L-208ENST00000474839 PKP2Q99959 881 aa12.35□□□□□ -0.43
SKIV2L-208ENST00000474839 ILKAPQ9H0C8 392 aaPredicted RBP12.35□□□□□ -0.43
SKIV2L-208ENST00000474839 TDRKHQ9Y2W6 561 aaKnown RBP12.35□□□□□ -0.43
SKIV2L-208ENST00000474839 BCLAF3A2AJT9 711 aaKnown RBP12.34□□□□□ -0.43
SKIV2L-208ENST00000474839 MFSD11O43934 449 aa12.34□□□□□ -0.43
SKIV2L-208ENST00000474839 FAM189A1O60320 539 aa12.34□□□□□ -0.43
SKIV2L-208ENST00000474839 SUPT3HO75486 399 aa12.34□□□□□ -0.43
SKIV2L-208ENST00000474839 ARIH2O95376 493 aa12.34□□□□□ -0.43
SKIV2L-208ENST00000474839 GSRP00390 522 aa12.34□□□□□ -0.43
SKIV2L-208ENST00000474839 PABPC4LP0CB38 370 aaKnown RBP12.34□□□□□ -0.43
SKIV2L-208ENST00000474839 HDCP19113 662 aa12.34□□□□□ -0.43
SKIV2L-208ENST00000474839 GRK2P25098 689 aa12.34□□□□□ -0.43
SKIV2L-208ENST00000474839 RPL5P46777 297 aaKnown RBP12.34□□□□□ -0.43
SKIV2L-208ENST00000474839 CD151P48509 253 aa12.34□□□□□ -0.43
SKIV2L-208ENST00000474839 MAPK10P53779 464 aa12.34□□□□□ -0.43
SKIV2L-208ENST00000474839 PITX1P78337 314 aaPredicted RBP12.34□□□□□ -0.43
SKIV2L-208ENST00000474839 RALGDSQ12967 914 aa12.34□□□□□ -0.43
SKIV2L-208ENST00000474839 MYLK3Q32MK0 819 aa12.34□□□□□ -0.43
SKIV2L-208ENST00000474839 LSM12Q3MHD2 195 aaKnown RBP12.34□□□□□ -0.43
SKIV2L-208ENST00000474839 SH2D4BQ5SQS7 431 aa12.34□□□□□ -0.43
SKIV2L-208ENST00000474839 FSTL4Q6MZW2 842 aa12.34□□□□□ -0.43
SKIV2L-208ENST00000474839 GADL1Q6ZQY3 521 aa12.34□□□□□ -0.43
SKIV2L-208ENST00000474839 MYO1HQ8N1T3 1032 aa12.34□□□□□ -0.43
SKIV2L-208ENST00000474839 LENG1Q96BZ8 264 aaPredicted RBP12.34□□□□□ -0.43
SKIV2L-208ENST00000474839 SGIP1Q9BQI5 828 aa12.34□□□□□ -0.43
SKIV2L-208ENST00000474839 GATA5Q9BWX5 397 aaPredicted RBP12.34□□□□□ -0.43
SKIV2L-208ENST00000474839 SF3B1O75533 1304 aaKnown RBP eCLIP12.34□□□□□ -0.435e-7■■■■■ 47.7
SKIV2L-208ENST00000474839 PALM2-AKAP2B1ALY0 433 aaPredicted RBP12.34□□□□□ -0.43
SKIV2L-208ENST00000474839 DNAJA2O60884 412 aa12.34□□□□□ -0.43
SKIV2L-208ENST00000474839 PTPRAP18433 802 aa12.34□□□□□ -0.43
SKIV2L-208ENST00000474839 TSPAN8P19075 237 aa12.34□□□□□ -0.43
SKIV2L-208ENST00000474839 L1CAMP32004 1257 aa12.34□□□□□ -0.43
SKIV2L-208ENST00000474839 PLK1P53350 603 aa12.34□□□□□ -0.43
SKIV2L-208ENST00000474839 USP10Q14694 798 aaKnown RBP12.34□□□□□ -0.43
SKIV2L-208ENST00000474839 UGT2A3Q6UWM9 527 aa12.34□□□□□ -0.43
SKIV2L-208ENST00000474839 ATP6V1E2Q96A05 226 aa12.34□□□□□ -0.43
SKIV2L-208ENST00000474839 CERS2Q96G23 380 aa12.34□□□□□ -0.43
SKIV2L-208ENST00000474839 FCRL3Q96P31 734 aaPredicted RBP12.34□□□□□ -0.43
SKIV2L-208ENST00000474839 TBCBQ99426 244 aa12.34□□□□□ -0.43
SKIV2L-208ENST00000474839 FERMT1Q9BQL6 677 aa12.34□□□□□ -0.43
SKIV2L-208ENST00000474839 SLC4A5Q9BY07 1137 aa12.34□□□□□ -0.43
SKIV2L-208ENST00000474839 CDH19Q9H159 772 aa12.34□□□□□ -0.43
SKIV2L-208ENST00000474839 PRDM12Q9H4Q4 367 aa12.34□□□□□ -0.43
SKIV2L-208ENST00000474839 AS3MTQ9HBK9 375 aa12.34□□□□□ -0.43
SKIV2L-208ENST00000474839 KLK14Q9P0G3 267 aa12.34□□□□□ -0.43
SKIV2L-208ENST00000474839 RUVBL2Q9Y230 463 aaKnown RBP12.34□□□□□ -0.43
SKIV2L-208ENST00000474839 TRBV21OR9-2A0A075B6F4 123 aaPredicted RBP12.33□□□□□ -0.43
SKIV2L-208ENST00000474839 ASLP04424 464 aa12.33□□□□□ -0.43
SKIV2L-208ENST00000474839 TFAP2AP05549 437 aa12.33□□□□□ -0.43
SKIV2L-208ENST00000474839 C2P06681 752 aa12.33□□□□□ -0.43
SKIV2L-208ENST00000474839 PCSK6P29122 969 aa12.33□□□□□ -0.43
SKIV2L-208ENST00000474839 SULT1E1P49888 294 aa12.33□□□□□ -0.43
SKIV2L-208ENST00000474839 CDH15P55291 814 aa12.33□□□□□ -0.43
SKIV2L-208ENST00000474839 TAZQ16635 292 aa12.33□□□□□ -0.43
SKIV2L-208ENST00000474839 SOWAHAQ2M3V2 549 aa12.33□□□□□ -0.43
SKIV2L-208ENST00000474839 PITRM1Q5JRX3 1037 aa12.33□□□□□ -0.43
SKIV2L-208ENST00000474839 B3GNT6Q6ZMB0 384 aa12.33□□□□□ -0.43
SKIV2L-208ENST00000474839 METTL25Q8N6Q8 603 aa12.33□□□□□ -0.43
SKIV2L-208ENST00000474839 TMIGD2Q96BF3 282 aa12.33□□□□□ -0.43
SKIV2L-208ENST00000474839 APBA2Q99767 749 aa12.33□□□□□ -0.43
SKIV2L-208ENST00000474839 WDR41Q9HAD4 459 aa12.33□□□□□ -0.43
SKIV2L-208ENST00000474839 NMRAL1Q9HBL8 299 aa12.33□□□□□ -0.43
SKIV2L-208ENST00000474839 CHRAC1Q9NRG0 131 aa12.33□□□□□ -0.43
SKIV2L-208ENST00000474839 TRIM13O60858 407 aa12.33□□□□□ -0.44
SKIV2L-208ENST00000474839 JUNP05412 331 aaKnown RBP12.33□□□□□ -0.44
SKIV2L-208ENST00000474839 THRAP10827 490 aa12.33□□□□□ -0.44
SKIV2L-208ENST00000474839 HNRNPLP14866 589 aaKnown RBP eCLIP12.33□□□□□ -0.44
Retrieved 100 of 20,778 RNA–protein pairs in 37 ms