RNA–Protein interactions for RNA: ENST00000474432.1

COL7A1-209, Transcript of collagen type VII alpha 1 chain, humanhuman

TSL 3

Gene COL7A1, Length 728 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL7A1-209ENST00000474432 CAMK1GQ96NX5 476 aa19.14■□□□□ 0.65
COL7A1-209ENST00000474432 SYNCQ9H7C4 482 aa19.14■□□□□ 0.65
COL7A1-209ENST00000474432 FANCLQ9NW38 375 aa19.14■□□□□ 0.65
COL7A1-209ENST00000474432 FASTKD2Q9NYY8 710 aaKnown RBP eCLIP19.14■□□□□ 0.65
COL7A1-209ENST00000474432 TMEM59LQ9UK28 342 aa19.14■□□□□ 0.65
COL7A1-209ENST00000474432 VANGL2Q9ULK5 521 aa19.14■□□□□ 0.65
COL7A1-209ENST00000474432 CABIN1Q9Y6J0 2220 aa19.14■□□□□ 0.65
COL7A1-209ENST00000474432 AKAP13Q12802 2813 aa19.14■□□□□ 0.65
COL7A1-209ENST00000474432 DOCK4Q8N1I0 1966 aa19.13■□□□□ 0.65
COL7A1-209ENST00000474432 EDDM13A0A1B0GTR0 161 aa19.13■□□□□ 0.65
COL7A1-209ENST00000474432 PES1O00541 588 aaKnown RBP19.13■□□□□ 0.65
COL7A1-209ENST00000474432 MID1O15344 667 aa19.13■□□□□ 0.65
COL7A1-209ENST00000474432 MOCS3O95396 460 aa19.13■□□□□ 0.65
COL7A1-209ENST00000474432 CHRNB2P17787 502 aa19.13■□□□□ 0.65
COL7A1-209ENST00000474432 SPINK2P20155 84 aa19.13■□□□□ 0.65
COL7A1-209ENST00000474432 FLT3P36888 993 aa19.13■□□□□ 0.65
COL7A1-209ENST00000474432 JAM2P57087 298 aa19.13■□□□□ 0.65
COL7A1-209ENST00000474432 SNX16P57768 344 aa19.13■□□□□ 0.65
COL7A1-209ENST00000474432 RNASE9P60153 205 aaKnown RBP19.13■□□□□ 0.65
COL7A1-209ENST00000474432 FOXC1Q12948 553 aa19.13■□□□□ 0.65
COL7A1-209ENST00000474432 SLC14A1Q13336 389 aa19.13■□□□□ 0.65
COL7A1-209ENST00000474432 CST6Q15828 149 aa19.13■□□□□ 0.65
COL7A1-209ENST00000474432 RABGAP1LQ5R372 815 aa19.13■□□□□ 0.65
COL7A1-209ENST00000474432 MMAAQ8IVH4 418 aaKnown RBP19.13■□□□□ 0.65
COL7A1-209ENST00000474432 CCDC117Q8IWD4 279 aaPredicted RBP19.13■□□□□ 0.65
COL7A1-209ENST00000474432 STK40Q8N2I9 435 aa19.13■□□□□ 0.65
COL7A1-209ENST00000474432 SLC20A1Q8WUM9 679 aa19.13■□□□□ 0.65
COL7A1-209ENST00000474432 RPRD1AQ96P16 312 aaPredicted RBP19.13■□□□□ 0.65
COL7A1-209ENST00000474432 TBCBQ99426 244 aa19.13■□□□□ 0.65
COL7A1-209ENST00000474432 FEM1AQ9BSK4 669 aa19.13■□□□□ 0.65
COL7A1-209ENST00000474432 TMEM121BQ9BXQ6 578 aaPredicted RBP19.13■□□□□ 0.65
COL7A1-209ENST00000474432 ZDHHC5Q9C0B5 715 aa19.13■□□□□ 0.65
COL7A1-209ENST00000474432 SGK2Q9HBY8 427 aa19.13■□□□□ 0.65
COL7A1-209ENST00000474432 OSGEPQ9NPF4 335 aa19.13■□□□□ 0.65
COL7A1-209ENST00000474432 TMPRSS4Q9NRS4 437 aa19.13■□□□□ 0.65
COL7A1-209ENST00000474432 FBXL12Q9NXK8 326 aa19.13■□□□□ 0.65
COL7A1-209ENST00000474432 SCML1Q9UN30 329 aa19.13■□□□□ 0.65
COL7A1-209ENST00000474432 TBC1D30Q9Y2I9 924 aa19.13■□□□□ 0.65
COL7A1-209ENST00000474432 SIK3Q9Y2K2 1263 aa19.13■□□□□ 0.65
COL7A1-209ENST00000474432 CEP83Q9Y592 693 aa19.13■□□□□ 0.65
COL7A1-209ENST00000474432 SNX10Q9Y5X0 201 aa19.13■□□□□ 0.65
COL7A1-209ENST00000474432 SH3BP5O60239 455 aa19.12■□□□□ 0.65
COL7A1-209ENST00000474432 CNTN5O94779 1100 aa19.12■□□□□ 0.65
COL7A1-209ENST00000474432 LSM8O95777 96 aaKnown RBP19.12■□□□□ 0.65
COL7A1-209ENST00000474432 CSNK1EP49674 416 aaKnown RBP19.12■□□□□ 0.65
COL7A1-209ENST00000474432 VASPP50552 380 aaPredicted RBP19.12■□□□□ 0.65
COL7A1-209ENST00000474432 GALCP54803 685 aa19.12■□□□□ 0.65
COL7A1-209ENST00000474432 TTC31Q49AM3 519 aaPredicted RBP19.12■□□□□ 0.65
COL7A1-209ENST00000474432 ALFQ53S48 1182 aa19.12■□□□□ 0.65
COL7A1-209ENST00000474432 ERICH1Q86X53 443 aa19.12■□□□□ 0.65
COL7A1-209ENST00000474432 AADATQ8N5Z0 425 aa19.12■□□□□ 0.65
COL7A1-209ENST00000474432 CPA5Q8WXQ8 436 aa19.12■□□□□ 0.65
COL7A1-209ENST00000474432 TKTL2Q9H0I9 626 aa19.12■□□□□ 0.65
COL7A1-209ENST00000474432 NEUROG2Q9H2A3 272 aa19.12■□□□□ 0.65
COL7A1-209ENST00000474432 HSD3B7Q9H2F3 369 aa19.12■□□□□ 0.65
COL7A1-209ENST00000474432 SLC32A1Q9H598 525 aa19.12■□□□□ 0.65
COL7A1-209ENST00000474432 EBF2Q9HAK2 575 aa19.12■□□□□ 0.65
COL7A1-209ENST00000474432 TM9SF3Q9HD45 589 aa19.12■□□□□ 0.65
COL7A1-209ENST00000474432 RRN3Q9NYV6 651 aa19.12■□□□□ 0.65
COL7A1-209ENST00000474432 ADAMTS1Q9UHI8 967 aa19.12■□□□□ 0.65
COL7A1-209ENST00000474432 TP53BP1Q12888 1972 aaPredicted RBP19.12■□□□□ 0.65
COL7A1-209ENST00000474432 A0A1B0GVT2 93 aa19.11■□□□□ 0.65
COL7A1-209ENST00000474432 A0A1W2PP55 124 aa19.11■□□□□ 0.65
COL7A1-209ENST00000474432 CYP1A1P04798 512 aaPredicted RBP19.11■□□□□ 0.65
COL7A1-209ENST00000474432 SLC8A1P32418 973 aa19.11■□□□□ 0.65
COL7A1-209ENST00000474432 SULT1E1P49888 294 aa19.11■□□□□ 0.65
COL7A1-209ENST00000474432 METAP1P53582 386 aa19.11■□□□□ 0.65
COL7A1-209ENST00000474432 MTA1Q13330 715 aa19.11■□□□□ 0.65
COL7A1-209ENST00000474432 SLC25A52Q3SY17 297 aa19.11■□□□□ 0.65
COL7A1-209ENST00000474432 KCNT1Q5JUK3 1230 aa19.11■□□□□ 0.65
COL7A1-209ENST00000474432 BRMS1LQ5PSV4 323 aa19.11■□□□□ 0.65
COL7A1-209ENST00000474432 FAM102AQ5T9C2 384 aaPredicted RBP19.11■□□□□ 0.65
COL7A1-209ENST00000474432 NAA35Q5VZE5 725 aa19.11■□□□□ 0.65
COL7A1-209ENST00000474432 APTXQ7Z2E3 356 aaKnown RBP19.11■□□□□ 0.65
COL7A1-209ENST00000474432 SIK2Q9H0K1 926 aa19.11■□□□□ 0.65
COL7A1-209ENST00000474432 PDCL3Q9H2J4 239 aa19.11■□□□□ 0.65
COL7A1-209ENST00000474432 WDCPQ9H6R7 721 aa19.11■□□□□ 0.65
COL7A1-209ENST00000474432 FNDC3AQ9Y2H6 1198 aaKnown RBP19.11■□□□□ 0.65
COL7A1-209ENST00000474432 IGF2RP11717 2491 aa19.1■□□□□ 0.65
COL7A1-209ENST00000474432 DRGXA6NNA5 263 aa19.1■□□□□ 0.65
COL7A1-209ENST00000474432 ATP9BO43861 1147 aa19.1■□□□□ 0.65
COL7A1-209ENST00000474432 CBFA2T3O75081 653 aa19.1■□□□□ 0.65
COL7A1-209ENST00000474432 CLDN11O75508 207 aa19.1■□□□□ 0.65
COL7A1-209ENST00000474432 GFPT2O94808 682 aa19.1■□□□□ 0.65
COL7A1-209ENST00000474432 FSBPO95073 299 aa19.1■□□□□ 0.65
COL7A1-209ENST00000474432 CD27P26842 260 aa19.1■□□□□ 0.65
COL7A1-209ENST00000474432 DRD3P35462 400 aa19.1■□□□□ 0.65
COL7A1-209ENST00000474432 POLR2FP61218 127 aaKnown RBP19.1■□□□□ 0.65
COL7A1-209ENST00000474432 SIM1P81133 766 aaPredicted RBP19.1■□□□□ 0.65
COL7A1-209ENST00000474432 FMO1Q01740 532 aa19.1■□□□□ 0.65
COL7A1-209ENST00000474432 SULT2A1Q06520 285 aa19.1■□□□□ 0.65
COL7A1-209ENST00000474432 NCAPHQ15003 741 aa19.1■□□□□ 0.65
COL7A1-209ENST00000474432 KIF19Q2TAC6 998 aa19.1■□□□□ 0.65
COL7A1-209ENST00000474432 HLA-BQ31612 363 aa19.1■□□□□ 0.65
COL7A1-209ENST00000474432 RAB6CQ53S08 254 aa19.1■□□□□ 0.65
COL7A1-209ENST00000474432 KIAA0895LQ68EN5 471 aa19.1■□□□□ 0.65
COL7A1-209ENST00000474432 LAYNQ6UX15 382 aa19.1■□□□□ 0.65
COL7A1-209ENST00000474432 DBX2Q6ZNG2 339 aa19.1■□□□□ 0.65
COL7A1-209ENST00000474432 SNX19Q92543 992 aa19.1■□□□□ 0.65
COL7A1-209ENST00000474432 FAM131CQ96AQ9 280 aa19.1■□□□□ 0.65
Retrieved 100 of 20,778 RNA–protein pairs in 70.9 ms