RNA–Protein interactions for RNA: ENST00000474421.1

PDLIM4-206, Transcript of PDZ and LIM domain 4, humanhuman

TSL 3

Gene PDLIM4, Length 1,084 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PDLIM4-206ENST00000474421 MSANTD4Q8NCY6 345 aa20.98■□□□□ 0.95
PDLIM4-206ENST00000474421 RPL10LQ96L21 214 aaKnown RBP20.98■□□□□ 0.95
PDLIM4-206ENST00000474421 FASTKD2Q9NYY8 710 aaKnown RBP eCLIP20.98■□□□□ 0.95
PDLIM4-206ENST00000474421 ADAMTS1Q9UHI8 967 aa20.98■□□□□ 0.95
PDLIM4-206ENST00000474421 TPX2Q9ULW0 747 aaKnown RBP20.98■□□□□ 0.95
PDLIM4-206ENST00000474421 NYNRINQ9P2P1 1898 aaKnown RBP20.98■□□□□ 0.95
PDLIM4-206ENST00000474421 A0A1W2PP55 124 aa20.97■□□□□ 0.95
PDLIM4-206ENST00000474421 HYAL3O43820 417 aaPredicted RBP20.97■□□□□ 0.95
PDLIM4-206ENST00000474421 CLDN11O75508 207 aa20.97■□□□□ 0.95
PDLIM4-206ENST00000474421 RNASEH2AO75792 299 aaKnown RBP20.97■□□□□ 0.95
PDLIM4-206ENST00000474421 TOP3BO95985 862 aaKnown RBP20.97■□□□□ 0.95
PDLIM4-206ENST00000474421 F9P00740 461 aa20.97■□□□□ 0.95
PDLIM4-206ENST00000474421 C5AR1P21730 350 aa20.97■□□□□ 0.95
PDLIM4-206ENST00000474421 SLC8A1P32418 973 aa20.97■□□□□ 0.95
PDLIM4-206ENST00000474421 FAM193AP78312 1265 aa20.97■□□□□ 0.95
PDLIM4-206ENST00000474421 BNC1Q01954 994 aa20.97■□□□□ 0.95
PDLIM4-206ENST00000474421 SUZ12Q15022 739 aaKnown RBP20.97■□□□□ 0.95
PDLIM4-206ENST00000474421 TCP11X2Q5H9J9 407 aa20.97■□□□□ 0.95
PDLIM4-206ENST00000474421 BRMS1LQ5PSV4 323 aa20.97■□□□□ 0.95
PDLIM4-206ENST00000474421 ACBD5Q5T8D3 534 aaPredicted RBP20.97■□□□□ 0.95
PDLIM4-206ENST00000474421 CIR1Q86X95 450 aaPredicted RBP20.97■□□□□ 0.95
PDLIM4-206ENST00000474421 OR2T34Q8NGX1 318 aa20.97■□□□□ 0.95
PDLIM4-206ENST00000474421 SETD7Q8WTS6 366 aaKnown RBP20.97■□□□□ 0.95
PDLIM4-206ENST00000474421 SKA1Q96BD8 255 aa20.97■□□□□ 0.95
PDLIM4-206ENST00000474421 C18orf8Q96DM3 657 aa20.97■□□□□ 0.95
PDLIM4-206ENST00000474421 CAMK1GQ96NX5 476 aa20.97■□□□□ 0.95
PDLIM4-206ENST00000474421 FAM129BQ96TA1 746 aa20.97■□□□□ 0.95
PDLIM4-206ENST00000474421 PLCB1Q9NQ66 1216 aa20.97■□□□□ 0.95
PDLIM4-206ENST00000474421 SLC25A13Q9UJS0 675 aa20.97■□□□□ 0.95
PDLIM4-206ENST00000474421 VANGL2Q9ULK5 521 aa20.97■□□□□ 0.95
PDLIM4-206ENST00000474421 FNDC3AQ9Y2H6 1198 aaKnown RBP20.97■□□□□ 0.95
PDLIM4-206ENST00000474421 FHOD1Q9Y613 1164 aa20.97■□□□□ 0.95
PDLIM4-206ENST00000474421 HS3ST4Q9Y661 456 aa20.97■□□□□ 0.95
PDLIM4-206ENST00000474421 FAM47DPA6NHR8 397 aa20.96■□□□□ 0.95
PDLIM4-206ENST00000474421 C1QTNF9BB2RNN3 333 aa20.96■□□□□ 0.95
PDLIM4-206ENST00000474421 PAGE1O75459 146 aa20.96■□□□□ 0.95
PDLIM4-206ENST00000474421 LSM8O95777 96 aaKnown RBP20.96■□□□□ 0.95
PDLIM4-206ENST00000474421 C1QTNF9P0C862 333 aa20.96■□□□□ 0.95
PDLIM4-206ENST00000474421 UCHL3P15374 230 aa20.96■□□□□ 0.95
PDLIM4-206ENST00000474421 GOT1P17174 413 aa20.96■□□□□ 0.95
PDLIM4-206ENST00000474421 MZF1P28698 734 aaPredicted RBP20.96■□□□□ 0.95
PDLIM4-206ENST00000474421 ANP32AP39687 249 aaKnown RBP20.96■□□□□ 0.95
PDLIM4-206ENST00000474421 GABRB2P47870 512 aa20.96■□□□□ 0.95
PDLIM4-206ENST00000474421 PSMD8P48556 350 aa20.96■□□□□ 0.95
PDLIM4-206ENST00000474421 GALCP54803 685 aa20.96■□□□□ 0.95
PDLIM4-206ENST00000474421 RACK1P63244 317 aaKnown RBP20.96■□□□□ 0.95
PDLIM4-206ENST00000474421 KCNMA1Q12791 1236 aa20.96■□□□□ 0.95
PDLIM4-206ENST00000474421 KIF19Q2TAC6 998 aa20.96■□□□□ 0.95
PDLIM4-206ENST00000474421 CXorf57Q6NSI4 855 aaKnown RBP20.96■□□□□ 0.95
PDLIM4-206ENST00000474421 CLEC17AQ6ZS10 378 aa20.96■□□□□ 0.95
PDLIM4-206ENST00000474421 ADAT2Q7Z6V5 191 aaKnown RBP20.96■□□□□ 0.95
PDLIM4-206ENST00000474421 DSG4Q86SJ6 1040 aa20.96■□□□□ 0.95
PDLIM4-206ENST00000474421 GLRX5Q86SX6 157 aa20.96■□□□□ 0.95
PDLIM4-206ENST00000474421 ERICH1Q86X53 443 aa20.96■□□□□ 0.95
PDLIM4-206ENST00000474421 STK40Q8N2I9 435 aa20.96■□□□□ 0.95
PDLIM4-206ENST00000474421 KDF1Q8NAX2 398 aaPredicted RBP20.96■□□□□ 0.95
PDLIM4-206ENST00000474421 PTPRN2Q92932 1015 aa20.96■□□□□ 0.95
PDLIM4-206ENST00000474421 IGSF8Q969P0 613 aa20.96■□□□□ 0.95
PDLIM4-206ENST00000474421 PGAP3Q96FM1 320 aaPredicted RBP20.96■□□□□ 0.95
PDLIM4-206ENST00000474421 SPAG5Q96R06 1193 aa20.96■□□□□ 0.95
PDLIM4-206ENST00000474421 NPY6RQ99463 290 aa20.96■□□□□ 0.95
PDLIM4-206ENST00000474421 STK33Q9BYT3 514 aa20.96■□□□□ 0.95
PDLIM4-206ENST00000474421 NEUROG2Q9H2A3 272 aa20.96■□□□□ 0.95
PDLIM4-206ENST00000474421 WDCPQ9H6R7 721 aa20.96■□□□□ 0.95
PDLIM4-206ENST00000474421 IL21RQ9HBE5 538 aa20.96■□□□□ 0.95
PDLIM4-206ENST00000474421 SAMSN1Q9NSI8 373 aaKnown RBP20.96■□□□□ 0.95
PDLIM4-206ENST00000474421 PCOLCE2Q9UKZ9 415 aa20.96■□□□□ 0.95
PDLIM4-206ENST00000474421 ANKRD6Q9Y2G4 727 aa20.96■□□□□ 0.95
PDLIM4-206ENST00000474421 MSRB2Q9Y3D2 182 aa20.96■□□□□ 0.95
PDLIM4-206ENST00000474421 FLRT2O43155 660 aa20.95■□□□□ 0.94
PDLIM4-206ENST00000474421 DFNA5O60443 496 aa20.95■□□□□ 0.94
PDLIM4-206ENST00000474421 IGHV4-34P06331 123 aa20.95■□□□□ 0.94
PDLIM4-206ENST00000474421 TPM2P07951 284 aa20.95■□□□□ 0.94
PDLIM4-206ENST00000474421 CXCR3P49682 368 aa20.95■□□□□ 0.94
PDLIM4-206ENST00000474421 STK19P49842 368 aaPredicted RBP20.95■□□□□ 0.94
PDLIM4-206ENST00000474421 CDH4P55283 916 aa20.95■□□□□ 0.94
PDLIM4-206ENST00000474421 RNASE9P60153 205 aaKnown RBP20.95■□□□□ 0.94
PDLIM4-206ENST00000474421 CENPCQ03188 943 aa20.95■□□□□ 0.94
PDLIM4-206ENST00000474421 C5orf22Q49AR2 442 aa20.95■□□□□ 0.94
PDLIM4-206ENST00000474421 NCEH1Q6PIU2 408 aa20.95■□□□□ 0.94
PDLIM4-206ENST00000474421 CDC6Q99741 560 aa20.95■□□□□ 0.94
PDLIM4-206ENST00000474421 FEM1AQ9BSK4 669 aa20.95■□□□□ 0.94
PDLIM4-206ENST00000474421 NAA15Q9BXJ9 866 aaKnown RBP20.95■□□□□ 0.94
PDLIM4-206ENST00000474421 ARHGEF38Q9NXL2 777 aa20.95■□□□□ 0.94
PDLIM4-206ENST00000474421 SERGEFQ9UGK8 458 aa20.95■□□□□ 0.94
PDLIM4-206ENST00000474421 APOBEC2Q9Y235 224 aaKnown RBP20.95■□□□□ 0.94
PDLIM4-206ENST00000474421 SNX11Q9Y5W9 270 aa20.95■□□□□ 0.94
PDLIM4-206ENST00000474421 A0A1W2PPC4 97 aa20.94■□□□□ 0.94
PDLIM4-206ENST00000474421 CBFA2T3O75081 653 aa20.94■□□□□ 0.94
PDLIM4-206ENST00000474421 IL1BP01584 269 aa20.94■□□□□ 0.94
PDLIM4-206ENST00000474421 SULT1E1P49888 294 aa20.94■□□□□ 0.94
PDLIM4-206ENST00000474421 CCR5P51681 352 aa20.94■□□□□ 0.94
PDLIM4-206ENST00000474421 SLC25A52Q3SY17 297 aa20.94■□□□□ 0.94
PDLIM4-206ENST00000474421 FAM102AQ5T9C2 384 aaPredicted RBP20.94■□□□□ 0.94
PDLIM4-206ENST00000474421 FAM46CQ5VWP2 391 aa20.94■□□□□ 0.94
PDLIM4-206ENST00000474421 DBX2Q6ZNG2 339 aa20.94■□□□□ 0.94
PDLIM4-206ENST00000474421 RAB44Q7Z6P3 723 aaPredicted RBP20.94■□□□□ 0.94
PDLIM4-206ENST00000474421 ENOX1Q8TC92 643 aaKnown RBP20.94■□□□□ 0.94
PDLIM4-206ENST00000474421 OR8D1Q8WZ84 308 aa20.94■□□□□ 0.94
PDLIM4-206ENST00000474421 GATA6Q92908 595 aa20.94■□□□□ 0.94
Retrieved 100 of 20,778 RNA–protein pairs in 39.6 ms