RNA–Protein interactions for RNA: ENST00000474215.5

CKS1B-206, Transcript of CDC28 protein kinase regulatory subunit 1B, humanhuman

TSL 3

Gene CKS1B, Length 739 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CKS1B-206ENST00000474215 FAM124AQ86V42 546 aa11.52□□□□□ -0.57
CKS1B-206ENST00000474215 CACUL1Q86Y37 369 aa11.52□□□□□ -0.57
CKS1B-206ENST00000474215 PHF13Q86YI8 300 aaPredicted RBP11.52□□□□□ -0.57
CKS1B-206ENST00000474215 RGL4Q8IZJ4 473 aa11.52□□□□□ -0.57
CKS1B-206ENST00000474215 EMC1Q8N766 993 aa11.52□□□□□ -0.57
CKS1B-206ENST00000474215 ALG14Q96F25 216 aa11.52□□□□□ -0.57
CKS1B-206ENST00000474215 RPL10LQ96L21 214 aaKnown RBP11.52□□□□□ -0.57
CKS1B-206ENST00000474215 HAPLN3Q96S86 360 aa11.52□□□□□ -0.57
CKS1B-206ENST00000474215 AGPAT1Q99943 283 aa11.52□□□□□ -0.57
CKS1B-206ENST00000474215 C11orf70Q9BRQ4 267 aa11.52□□□□□ -0.57
CKS1B-206ENST00000474215 FUCA2Q9BTY2 467 aa11.52□□□□□ -0.57
CKS1B-206ENST00000474215 RSPH9Q9H1X1 276 aaPredicted RBP11.52□□□□□ -0.57
CKS1B-206ENST00000474215 METTL5Q9NRN9 209 aaKnown RBP11.52□□□□□ -0.57
CKS1B-206ENST00000474215 ADAM22Q9P0K1 906 aa11.52□□□□□ -0.57
CKS1B-206ENST00000474215 TBC1D30Q9Y2I9 924 aa11.52□□□□□ -0.57
CKS1B-206ENST00000474215 ATXN2Q99700 1313 aaKnown RBP11.52□□□□□ -0.57
CKS1B-206ENST00000474215 PLXND1Q9Y4D7 1925 aa11.52□□□□□ -0.57
CKS1B-206ENST00000474215 EDDM13A0A1B0GTR0 161 aa11.51□□□□□ -0.57
CKS1B-206ENST00000474215 CDX4O14627 284 aaPredicted RBP11.51□□□□□ -0.57
CKS1B-206ENST00000474215 RNASEH1O60930 286 aaKnown RBP11.51□□□□□ -0.57
CKS1B-206ENST00000474215 SIN3BO75182 1162 aa11.51□□□□□ -0.57
CKS1B-206ENST00000474215 CNTN5O94779 1100 aa11.51□□□□□ -0.57
CKS1B-206ENST00000474215 KRT3P12035 628 aa11.51□□□□□ -0.57
CKS1B-206ENST00000474215 ENGP17813 658 aa11.51□□□□□ -0.57
CKS1B-206ENST00000474215 MAOBP27338 520 aa11.51□□□□□ -0.57
CKS1B-206ENST00000474215 RDXP35241 583 aaKnown RBP11.51□□□□□ -0.57
CKS1B-206ENST00000474215 ATP11AP98196 1134 aa11.51□□□□□ -0.57
CKS1B-206ENST00000474215 GFPT1Q06210 699 aaPredicted RBP11.51□□□□□ -0.57
CKS1B-206ENST00000474215 PPM1JQ5JR12 505 aa11.51□□□□□ -0.57
CKS1B-206ENST00000474215 DAB2IPQ5VWQ8 1189 aa11.51□□□□□ -0.57
CKS1B-206ENST00000474215 IRF2BP2Q7Z5L9 587 aa11.51□□□□□ -0.57
CKS1B-206ENST00000474215 ZNF683Q8IZ20 524 aa11.51□□□□□ -0.57
CKS1B-206ENST00000474215 OR52K2Q8NGK3 314 aa11.51□□□□□ -0.57
CKS1B-206ENST00000474215 RXFP2Q8WXD0 754 aa11.51□□□□□ -0.57
CKS1B-206ENST00000474215 DNASE2BQ8WZ79 361 aa11.51□□□□□ -0.57
CKS1B-206ENST00000474215 NAP1L5Q96NT1 182 aaPredicted RBP11.51□□□□□ -0.57
CKS1B-206ENST00000474215 PCED1AQ9H1Q7 454 aa11.51□□□□□ -0.57
CKS1B-206ENST00000474215 CAPN10Q9HC96 672 aa11.51□□□□□ -0.57
CKS1B-206ENST00000474215 TMEM9BQ9NQ34 198 aa11.51□□□□□ -0.57
CKS1B-206ENST00000474215 TMPRSS4Q9NRS4 437 aa11.51□□□□□ -0.57
CKS1B-206ENST00000474215 SEPT11Q9NVA2 429 aaKnown RBP11.51□□□□□ -0.57
CKS1B-206ENST00000474215 MYO6Q9UM54 1294 aa11.51□□□□□ -0.57
CKS1B-206ENST00000474215 SCML1Q9UN30 329 aa11.51□□□□□ -0.57
CKS1B-206ENST00000474215 OR51B4Q9Y5P0 310 aa11.51□□□□□ -0.57
CKS1B-206ENST00000474215 SNX10Q9Y5X0 201 aa11.51□□□□□ -0.57
CKS1B-206ENST00000474215 ITIH6Q6UXX5 1313 aa11.51□□□□□ -0.57
CKS1B-206ENST00000474215 IGLV3-10A0A075B6K4 115 aa11.5□□□□□ -0.57
CKS1B-206ENST00000474215 A0A1B0GTH6 734 aa11.5□□□□□ -0.57
CKS1B-206ENST00000474215 SYCE3A1L190 88 aa11.5□□□□□ -0.57
CKS1B-206ENST00000474215 C2CD4BA6NLJ0 364 aa11.5□□□□□ -0.57
CKS1B-206ENST00000474215 MEI4A8MW99 385 aa11.5□□□□□ -0.57
CKS1B-206ENST00000474215 SRGAP2O75044 1071 aa11.5□□□□□ -0.57
CKS1B-206ENST00000474215 CALB1P05937 261 aa11.5□□□□□ -0.57
CKS1B-206ENST00000474215 GNSP15586 552 aa11.5□□□□□ -0.57
CKS1B-206ENST00000474215 SDC4P31431 198 aa11.5□□□□□ -0.57
CKS1B-206ENST00000474215 ACSL1P33121 698 aa11.5□□□□□ -0.57
CKS1B-206ENST00000474215 RFC1P35251 1148 aaPredicted RBP11.5□□□□□ -0.57
CKS1B-206ENST00000474215 ADRA1BP35368 520 aa11.5□□□□□ -0.57
CKS1B-206ENST00000474215 PTPN9P43378 593 aa11.5□□□□□ -0.57
CKS1B-206ENST00000474215 NUMBP49757 651 aa11.5□□□□□ -0.57
CKS1B-206ENST00000474215 STK19P49842 368 aaPredicted RBP11.5□□□□□ -0.57
CKS1B-206ENST00000474215 VASPP50552 380 aaPredicted RBP11.5□□□□□ -0.57
CKS1B-206ENST00000474215 SFSWAPQ12872 951 aaKnown RBP11.5□□□□□ -0.57
CKS1B-206ENST00000474215 CCDC14Q49A88 953 aa11.5□□□□□ -0.57
CKS1B-206ENST00000474215 TTC31Q49AM3 519 aaPredicted RBP11.5□□□□□ -0.57
CKS1B-206ENST00000474215 ALFQ53S48 1182 aa11.5□□□□□ -0.57
CKS1B-206ENST00000474215 SH3PXD2AQ5TCZ1 1133 aa11.5□□□□□ -0.57
CKS1B-206ENST00000474215 LRSAM1Q6UWE0 723 aa11.5□□□□□ -0.57
CKS1B-206ENST00000474215 USP30Q70CQ3 517 aa11.5□□□□□ -0.57
CKS1B-206ENST00000474215 SETD3Q86TU7 594 aaPredicted RBP11.5□□□□□ -0.57
CKS1B-206ENST00000474215 FAM131BQ86XD5 332 aa11.5□□□□□ -0.57
CKS1B-206ENST00000474215 JOSD2Q8TAC2 188 aa11.5□□□□□ -0.57
CKS1B-206ENST00000474215 BAP1Q92560 729 aa11.5□□□□□ -0.57
CKS1B-206ENST00000474215 PTPRN2Q92932 1015 aa11.5□□□□□ -0.57
CKS1B-206ENST00000474215 FAM129BQ96TA1 746 aa11.5□□□□□ -0.57
CKS1B-206ENST00000474215 BTBD1Q9H0C5 482 aa11.5□□□□□ -0.57
CKS1B-206ENST00000474215 PABPC3Q9H361 631 aaKnown RBP11.5□□□□□ -0.57
CKS1B-206ENST00000474215 SUSD2Q9UGT4 822 aa11.5□□□□□ -0.57
CKS1B-206ENST00000474215 VPS28Q9UK41 221 aa11.5□□□□□ -0.57
CKS1B-206ENST00000474215 NCKAP1Q9Y2A7 1128 aa11.5□□□□□ -0.57
CKS1B-206ENST00000474215 MUC22E2RYF6 1773 aaPredicted RBP11.49□□□□□ -0.57
CKS1B-206ENST00000474215 CKAP5Q14008 2032 aa11.49□□□□□ -0.57
CKS1B-206ENST00000474215 A0A1W2PQC6 194 aa11.49□□□□□ -0.57
CKS1B-206ENST00000474215 SIGLEC16A6NMB1 481 aa11.49□□□□□ -0.57
CKS1B-206ENST00000474215 E9PAM4 449 aa11.49□□□□□ -0.57
CKS1B-206ENST00000474215 ARHGAP33O14559 1287 aa11.49□□□□□ -0.57
CKS1B-206ENST00000474215 GJB6O95452 261 aa11.49□□□□□ -0.57
CKS1B-206ENST00000474215 SEMA4FO95754 770 aa11.49□□□□□ -0.57
CKS1B-206ENST00000474215 SERPINC1P01008 464 aa11.49□□□□□ -0.57
CKS1B-206ENST00000474215 RHOCP08134 193 aa11.49□□□□□ -0.57
CKS1B-206ENST00000474215 SYPP08247 313 aa11.49□□□□□ -0.57
CKS1B-206ENST00000474215 PTMSP20962 102 aa11.49□□□□□ -0.57
CKS1B-206ENST00000474215 TNFAIP3P21580 790 aa11.49□□□□□ -0.57
CKS1B-206ENST00000474215 SLC8A1P32418 973 aa11.49□□□□□ -0.57
CKS1B-206ENST00000474215 MAPK8P45983 427 aa11.49□□□□□ -0.57
CKS1B-206ENST00000474215 ATXN3P54252 364 aaPredicted RBP11.49□□□□□ -0.57
CKS1B-206ENST00000474215 GSCP56915 257 aaPredicted RBP11.49□□□□□ -0.57
CKS1B-206ENST00000474215 TPM4P67936 248 aa11.49□□□□□ -0.57
CKS1B-206ENST00000474215 NR1I3Q14994 352 aa11.49□□□□□ -0.57
CKS1B-206ENST00000474215 CST6Q15828 149 aa11.49□□□□□ -0.57
Retrieved 100 of 20,778 RNA–protein pairs in 40.1 ms