RNA–Protein interactions for RNA: ENST00000473961.5

BRCA1-212, Transcript of BRCA1, DNA repair associated, humanhuman

TSL 2

Gene BRCA1, Length 958 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
BRCA1-212ENST00000473961 CHRM4P08173 479 aa4.6□□□□□ -1.67
BRCA1-212ENST00000473961 LAMP2P13473 410 aa4.6□□□□□ -1.67
BRCA1-212ENST00000473961 COX7A2P14406 83 aa4.6□□□□□ -1.67
BRCA1-212ENST00000473961 PKMP14618 531 aaKnown RBP4.6□□□□□ -1.67
BRCA1-212ENST00000473961 HOXB9P17482 250 aaPredicted RBP4.6□□□□□ -1.67
BRCA1-212ENST00000473961 NR4A1P22736 598 aa4.6□□□□□ -1.67
BRCA1-212ENST00000473961 EPHA8P29322 1005 aaPredicted RBP4.6□□□□□ -1.67
BRCA1-212ENST00000473961 CCT8P50990 548 aa4.6□□□□□ -1.67
BRCA1-212ENST00000473961 MVDP53602 400 aa4.6□□□□□ -1.67
BRCA1-212ENST00000473961 COPB1P53618 953 aaKnown RBP4.6□□□□□ -1.67
BRCA1-212ENST00000473961 INHBEP58166 350 aa4.6□□□□□ -1.67
BRCA1-212ENST00000473961 RPL7AP62424 266 aaKnown RBP4.6□□□□□ -1.67
BRCA1-212ENST00000473961 SLC25A3Q00325 362 aa4.6□□□□□ -1.67
BRCA1-212ENST00000473961 CALD1Q05682 793 aaKnown RBP4.6□□□□□ -1.67
BRCA1-212ENST00000473961 NEXNQ0ZGT2 675 aa4.6□□□□□ -1.67
BRCA1-212ENST00000473961 PTP4A2Q12974 167 aa4.6□□□□□ -1.67
BRCA1-212ENST00000473961 TUBA3CQ13748 450 aa4.6□□□□□ -1.67
BRCA1-212ENST00000473961 BYSLQ13895 437 aaKnown RBP4.6□□□□□ -1.67
BRCA1-212ENST00000473961 R3HDM1Q15032 1099 aaKnown RBP4.6□□□□□ -1.67
BRCA1-212ENST00000473961 TBCEQ15813 527 aaPredicted RBP4.6□□□□□ -1.67
BRCA1-212ENST00000473961 FAM133BQ5BKY9 247 aaKnown RBP4.6□□□□□ -1.67
BRCA1-212ENST00000473961 MFSD4BQ5TF39 518 aa4.6□□□□□ -1.67
BRCA1-212ENST00000473961 TUBA3EQ6PEY2 450 aa4.6□□□□□ -1.67
BRCA1-212ENST00000473961 TMEM65Q6PI78 240 aa4.6□□□□□ -1.67
BRCA1-212ENST00000473961 RNF207Q6ZRF8 634 aa4.6□□□□□ -1.67
BRCA1-212ENST00000473961 C16orf71Q8IYS4 520 aaPredicted RBP4.6□□□□□ -1.67
BRCA1-212ENST00000473961 OR8H2Q8N162 312 aa4.6□□□□□ -1.67
BRCA1-212ENST00000473961 GALNT4Q8N4A0 578 aa4.6□□□□□ -1.67
BRCA1-212ENST00000473961 C1orf131Q8NDD1 294 aaKnown RBP4.6□□□□□ -1.67
BRCA1-212ENST00000473961 BEND2Q8NDZ0 799 aa4.6□□□□□ -1.67
BRCA1-212ENST00000473961 ACTRT2Q8TDY3 377 aa4.6□□□□□ -1.67
BRCA1-212ENST00000473961 RUFY2Q8WXA3 655 aa4.6□□□□□ -1.67
BRCA1-212ENST00000473961 CNOT9Q92600 299 aaKnown RBP4.6□□□□□ -1.67
BRCA1-212ENST00000473961 CAVIN3Q969G5 261 aa4.6□□□□□ -1.67
BRCA1-212ENST00000473961 RNFT2Q96EX2 444 aa4.6□□□□□ -1.67
BRCA1-212ENST00000473961 EDC3Q96F86 508 aaKnown RBP4.6□□□□□ -1.67
BRCA1-212ENST00000473961 MMS19Q96T76 1030 aa4.6□□□□□ -1.67
BRCA1-212ENST00000473961 EYA3Q99504 573 aa4.6□□□□□ -1.67
BRCA1-212ENST00000473961 HERC2P3Q9BVR0 1158 aa4.6□□□□□ -1.67
BRCA1-212ENST00000473961 WDR11Q9BZH6 1224 aa4.6□□□□□ -1.67
BRCA1-212ENST00000473961 SLC25A18Q9H1K4 315 aa4.6□□□□□ -1.67
BRCA1-212ENST00000473961 ERVK-5Q9HDB9 667 aa4.6□□□□□ -1.67
BRCA1-212ENST00000473961 GAR1Q9NY12 217 aaKnown RBP4.6□□□□□ -1.67
BRCA1-212ENST00000473961 MTMR4Q9NYA4 1195 aa4.6□□□□□ -1.67
BRCA1-212ENST00000473961 MAST3O60307 1309 aa4.6□□□□□ -1.67
BRCA1-212ENST00000473961 NPIPB13A6NJU9 1138 aa4.59□□□□□ -1.67
BRCA1-212ENST00000473961 FAM90A7PA6NKC0 464 aa4.59□□□□□ -1.67
BRCA1-212ENST00000473961 NPIPB5A8MRT5 1133 aa4.59□□□□□ -1.67
BRCA1-212ENST00000473961 FAM90A22PA8MWA6 464 aa4.59□□□□□ -1.67
BRCA1-212ENST00000473961 FAM90A12PA8MX19 464 aa4.59□□□□□ -1.67
BRCA1-212ENST00000473961 FAM90A23PA8MXZ1 464 aa4.59□□□□□ -1.67
BRCA1-212ENST00000473961 NPIPB4C9JG80 1138 aa4.59□□□□□ -1.67
BRCA1-212ENST00000473961 BTBD19C9JJ37 291 aa4.59□□□□□ -1.67
BRCA1-212ENST00000473961 H0YIZ8 118 aa4.59□□□□□ -1.67
BRCA1-212ENST00000473961 MT-CO3P00414 261 aa4.59□□□□□ -1.67
BRCA1-212ENST00000473961 SPARCP09486 303 aa4.59□□□□□ -1.67
BRCA1-212ENST00000473961 ALDOCP09972 364 aaKnown RBP4.59□□□□□ -1.67
BRCA1-212ENST00000473961 ELFN1P0C7U0 828 aa4.59□□□□□ -1.67
BRCA1-212ENST00000473961 TGM2P21980 687 aa4.59□□□□□ -1.67
BRCA1-212ENST00000473961 PRPH2P23942 346 aa4.59□□□□□ -1.67
BRCA1-212ENST00000473961 NFKBIAP25963 317 aa4.59□□□□□ -1.67
BRCA1-212ENST00000473961 ZFP36P26651 326 aaKnown RBP4.59□□□□□ -1.67
BRCA1-212ENST00000473961 NDUFS1P28331 727 aa4.59□□□□□ -1.67
BRCA1-212ENST00000473961 HOXD12P35452 270 aa4.59□□□□□ -1.67
BRCA1-212ENST00000473961 HNF1BP35680 557 aa4.59□□□□□ -1.67
BRCA1-212ENST00000473961 MLH1P40692 756 aa4.59□□□□□ -1.67
BRCA1-212ENST00000473961 RAD52P43351 418 aa4.59□□□□□ -1.67
BRCA1-212ENST00000473961 HARS2P49590 506 aaKnown RBP4.59□□□□□ -1.67
BRCA1-212ENST00000473961 CTCFP49711 727 aaPredicted RBP4.59□□□□□ -1.67
BRCA1-212ENST00000473961 AGTR2P50052 363 aa4.59□□□□□ -1.67
BRCA1-212ENST00000473961 SLC37A1P57057 533 aa4.59□□□□□ -1.67
BRCA1-212ENST00000473961 KRTAP10-9P60411 292 aa4.59□□□□□ -1.67
BRCA1-212ENST00000473961 KCNB1Q14721 858 aa4.59□□□□□ -1.67
BRCA1-212ENST00000473961 MFSD13AQ14CX5 517 aa4.59□□□□□ -1.67
BRCA1-212ENST00000473961 WTAPQ15007 396 aa4.59□□□□□ -1.67
BRCA1-212ENST00000473961 AADACL2Q6P093 401 aa4.59□□□□□ -1.67
BRCA1-212ENST00000473961 KIAA1324Q6UXG2 1013 aaKnown RBP4.59□□□□□ -1.67
BRCA1-212ENST00000473961 KYAT3Q6YP21 454 aaKnown RBP4.59□□□□□ -1.67
BRCA1-212ENST00000473961 RHOUQ7L0Q8 258 aa4.59□□□□□ -1.67
BRCA1-212ENST00000473961 GRASPQ7Z6J2 395 aaPredicted RBP4.59□□□□□ -1.67
BRCA1-212ENST00000473961 SCN4BQ8IWT1 228 aa4.59□□□□□ -1.67
BRCA1-212ENST00000473961 SLC44A3Q8N4M1 653 aa4.59□□□□□ -1.67
BRCA1-212ENST00000473961 LINC01465Q8N7H1 131 aa4.59□□□□□ -1.67
BRCA1-212ENST00000473961 MAFAQ8NHW3 353 aaPredicted RBP4.59□□□□□ -1.67
BRCA1-212ENST00000473961 CACTINQ8WUQ7 758 aaKnown RBP4.59□□□□□ -1.67
BRCA1-212ENST00000473961 RAB40AQ8WXH6 277 aa4.59□□□□□ -1.67
BRCA1-212ENST00000473961 POMGNT1Q8WZA1 660 aa4.59□□□□□ -1.67
BRCA1-212ENST00000473961 SMARCE1Q969G3 411 aa4.59□□□□□ -1.67
BRCA1-212ENST00000473961 ELP4Q96EB1 424 aa4.59□□□□□ -1.67
BRCA1-212ENST00000473961 DAZAP1Q96EP5 407 aaKnown RBP4.59□□□□□ -1.67
BRCA1-212ENST00000473961 PRR11Q96HE9 360 aaPredicted RBP4.59□□□□□ -1.67
BRCA1-212ENST00000473961 ZNF845Q96IR2 970 aaPredicted RBP4.59□□□□□ -1.67
BRCA1-212ENST00000473961 ABHD14AQ9BUJ0 271 aa4.59□□□□□ -1.67
BRCA1-212ENST00000473961 CADM1Q9BY67 442 aaKnown RBP4.59□□□□□ -1.67
BRCA1-212ENST00000473961 CIPCQ9C0C6 399 aa4.59□□□□□ -1.67
BRCA1-212ENST00000473961 ARHGAP39Q9C0H5 1083 aa4.59□□□□□ -1.67
BRCA1-212ENST00000473961 CTDSP1Q9GZU7 261 aa4.59□□□□□ -1.67
BRCA1-212ENST00000473961 EPHX3Q9H6B9 360 aa4.59□□□□□ -1.67
BRCA1-212ENST00000473961 IL21RQ9HBE5 538 aa4.59□□□□□ -1.67
BRCA1-212ENST00000473961 NKIRAS2Q9NYR9 191 aa4.59□□□□□ -1.67
Retrieved 100 of 20,778 RNA–protein pairs in 23.6 ms