RNA–Protein interactions for RNA: ENST00000471260.1

HMGN1-211, Transcript of high mobility group nucleosome binding domain 1, humanhuman

TSL 3

Gene HMGN1, Length 615 nt, Biotype processed transcript, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMGN1-211ENST00000471260 NCKAP1Q9Y2A7 1128 aa13.93□□□□□ -0.18
HMGN1-211ENST00000471260 PAXBP1Q9Y5B6 917 aa13.93□□□□□ -0.18
HMGN1-211ENST00000471260 FHOD1Q9Y613 1164 aa13.93□□□□□ -0.18
HMGN1-211ENST00000471260 PCNX2A6NKB5 2137 aa13.92□□□□□ -0.18
HMGN1-211ENST00000471260 M0QYT0 321 aa13.92□□□□□ -0.18
HMGN1-211ENST00000471260 BCAT2O15382 392 aaPredicted RBP13.92□□□□□ -0.18
HMGN1-211ENST00000471260 GRAP2O75791 330 aa13.92□□□□□ -0.18
HMGN1-211ENST00000471260 MAOBP27338 520 aa13.92□□□□□ -0.18
HMGN1-211ENST00000471260 C5orf22Q49AR2 442 aa13.92□□□□□ -0.18
HMGN1-211ENST00000471260 CDKAL1Q5VV42 579 aa13.92□□□□□ -0.18
HMGN1-211ENST00000471260 RNF219Q5W0B1 726 aaPredicted RBP13.92□□□□□ -0.18
HMGN1-211ENST00000471260 SND1Q7KZF4 910 aaKnown RBP eCLIP13.92□□□□□ -0.18
HMGN1-211ENST00000471260 ARCQ7LC44 396 aa13.92□□□□□ -0.18
HMGN1-211ENST00000471260 ERICH1Q86X53 443 aa13.92□□□□□ -0.18
HMGN1-211ENST00000471260 CCAR2Q8N163 923 aaKnown RBP13.92□□□□□ -0.18
HMGN1-211ENST00000471260 NT5C3BQ969T7 300 aa13.92□□□□□ -0.18
HMGN1-211ENST00000471260 ZNF830Q96NB3 372 aaPredicted RBP13.92□□□□□ -0.18
HMGN1-211ENST00000471260 NPY6RQ99463 290 aa13.92□□□□□ -0.18
HMGN1-211ENST00000471260 FASTKD2Q9NYY8 710 aaKnown RBP eCLIP13.92□□□□□ -0.18
HMGN1-211ENST00000471260 PCDH15Q96QU1 1955 aa13.92□□□□□ -0.18
HMGN1-211ENST00000471260 EDDM13A0A1B0GTR0 161 aa13.91□□□□□ -0.18
HMGN1-211ENST00000471260 F8VZ95 297 aa13.91□□□□□ -0.18
HMGN1-211ENST00000471260 CTIFO43310 598 aaKnown RBP13.91□□□□□ -0.18
HMGN1-211ENST00000471260 SIN3BO75182 1162 aa13.91□□□□□ -0.18
HMGN1-211ENST00000471260 CLDN11O75508 207 aa13.91□□□□□ -0.18
HMGN1-211ENST00000471260 GJB3O75712 270 aa13.91□□□□□ -0.18
HMGN1-211ENST00000471260 SEMA4FO95754 770 aa13.91□□□□□ -0.18
HMGN1-211ENST00000471260 PNMA6AP0CW24 399 aaPredicted RBP13.91□□□□□ -0.18
HMGN1-211ENST00000471260 ACSL1P33121 698 aa13.91□□□□□ -0.18
HMGN1-211ENST00000471260 ZNF252P-AS1Q0IIN9 211 aa13.91□□□□□ -0.18
HMGN1-211ENST00000471260 NME3Q13232 169 aa13.91□□□□□ -0.18
HMGN1-211ENST00000471260 AUHQ13825 339 aaKnown RBP13.91□□□□□ -0.18
HMGN1-211ENST00000471260 FKBP15Q5T1M5 1219 aa13.91□□□□□ -0.18
HMGN1-211ENST00000471260 C9orf64Q5T6V5 341 aa13.91□□□□□ -0.18
HMGN1-211ENST00000471260 FBXL22Q6P050 247 aa13.91□□□□□ -0.18
HMGN1-211ENST00000471260 MMS22LQ6ZRQ5 1243 aa13.91□□□□□ -0.18
HMGN1-211ENST00000471260 CACUL1Q86Y37 369 aa13.91□□□□□ -0.18
HMGN1-211ENST00000471260 APCDD1Q8J025 514 aa13.91□□□□□ -0.18
HMGN1-211ENST00000471260 DEFB124Q8NES8 71 aa13.91□□□□□ -0.18
HMGN1-211ENST00000471260 RPRD1AQ96P16 312 aaPredicted RBP13.91□□□□□ -0.18
HMGN1-211ENST00000471260 PABPC3Q9H361 631 aaKnown RBP13.91□□□□□ -0.18
HMGN1-211ENST00000471260 WDCPQ9H6R7 721 aa13.91□□□□□ -0.18
HMGN1-211ENST00000471260 ARHGEF38Q9NXL2 777 aa13.91□□□□□ -0.18
HMGN1-211ENST00000471260 EIF2B4Q9UI10 523 aaKnown RBP13.91□□□□□ -0.18
HMGN1-211ENST00000471260 TPX2Q9ULW0 747 aaKnown RBP13.91□□□□□ -0.18
HMGN1-211ENST00000471260 ZBTB32Q9Y2Y4 487 aaPredicted RBP13.91□□□□□ -0.18
HMGN1-211ENST00000471260 SYNJ2BP-COX16A0A087WUM0 186 aa13.9□□□□□ -0.18
HMGN1-211ENST00000471260 ZNF559-ZNF177A0A0A6YYI6 481 aaPredicted RBP13.9□□□□□ -0.18
HMGN1-211ENST00000471260 GIPC1O14908 333 aa13.9□□□□□ -0.18
HMGN1-211ENST00000471260 CCP110O43303 1012 aa13.9□□□□□ -0.18
HMGN1-211ENST00000471260 CBFA2T2O43439 604 aa13.9□□□□□ -0.18
HMGN1-211ENST00000471260 ZNF883P0CG24 379 aa13.9□□□□□ -0.18
HMGN1-211ENST00000471260 CXCR3P49682 368 aa13.9□□□□□ -0.18
HMGN1-211ENST00000471260 AFF3P51826 1226 aaKnown RBP13.9□□□□□ -0.18
HMGN1-211ENST00000471260 GRIK2Q13002 908 aa13.9□□□□□ -0.18
HMGN1-211ENST00000471260 ZNF177Q13360 481 aaPredicted RBP13.9□□□□□ -0.18
HMGN1-211ENST00000471260 KRT31Q15323 416 aa13.9□□□□□ -0.18
HMGN1-211ENST00000471260 SLC25A52Q3SY17 297 aa13.9□□□□□ -0.18
HMGN1-211ENST00000471260 CXorf57Q6NSI4 855 aaKnown RBP13.9□□□□□ -0.18
HMGN1-211ENST00000471260 FAM124AQ86V42 546 aa13.9□□□□□ -0.18
HMGN1-211ENST00000471260 XYLT1Q86Y38 959 aa13.9□□□□□ -0.18
HMGN1-211ENST00000471260 LRRC8AQ8IWT6 810 aa13.9□□□□□ -0.18
HMGN1-211ENST00000471260 ZCCHC9Q8N567 271 aaKnown RBP13.9□□□□□ -0.18
HMGN1-211ENST00000471260 AOPEPQ8N6M6 819 aa13.9□□□□□ -0.18
HMGN1-211ENST00000471260 ANKRD20A12PQ8NF67 263 aa13.9□□□□□ -0.18
HMGN1-211ENST00000471260 C1orf216Q8TAB5 229 aa13.9□□□□□ -0.18
HMGN1-211ENST00000471260 EPS8L1Q8TE68 723 aa13.9□□□□□ -0.18
HMGN1-211ENST00000471260 PTPRN2Q92932 1015 aa13.9□□□□□ -0.18
HMGN1-211ENST00000471260 C1orf74Q96LT6 269 aa13.9□□□□□ -0.18
HMGN1-211ENST00000471260 MIR1-1HGQ9H1L0 117 aa13.9□□□□□ -0.18
HMGN1-211ENST00000471260 GANQ9H2C0 597 aa13.9□□□□□ -0.18
HMGN1-211ENST00000471260 C6orf106Q9H6K1 298 aaPredicted RBP13.9□□□□□ -0.18
HMGN1-211ENST00000471260 FSCN3Q9NQT6 498 aa13.9□□□□□ -0.18
HMGN1-211ENST00000471260 TAB2Q9NYJ8 693 aa13.9□□□□□ -0.18
HMGN1-211ENST00000471260 COX16Q9P0S2 106 aa13.9□□□□□ -0.18
HMGN1-211ENST00000471260 ADAMTS1Q9UHI8 967 aa13.9□□□□□ -0.18
HMGN1-211ENST00000471260 SLCO3A1Q9UIG8 710 aa13.9□□□□□ -0.18
HMGN1-211ENST00000471260 FZD4Q9ULV1 537 aa13.9□□□□□ -0.18
HMGN1-211ENST00000471260 HS3ST4Q9Y661 456 aa13.9□□□□□ -0.18
HMGN1-211ENST00000471260 LRRC10BA6NIK2 292 aa13.89□□□□□ -0.19
HMGN1-211ENST00000471260 TTC34A8MYJ7 566 aa13.89□□□□□ -0.19
HMGN1-211ENST00000471260 PAGE1O75459 146 aa13.89□□□□□ -0.19
HMGN1-211ENST00000471260 CER1O95813 267 aa13.89□□□□□ -0.19
HMGN1-211ENST00000471260 ADH1BP00325 375 aa13.89□□□□□ -0.19
HMGN1-211ENST00000471260 CD59P13987 128 aa13.89□□□□□ -0.19
HMGN1-211ENST00000471260 PDGFRAP16234 1089 aa13.89□□□□□ -0.19
HMGN1-211ENST00000471260 RDXP35241 583 aaKnown RBP13.89□□□□□ -0.19
HMGN1-211ENST00000471260 CTSOP43234 321 aaPredicted RBP13.89□□□□□ -0.19
HMGN1-211ENST00000471260 CDH4P55283 916 aa13.89□□□□□ -0.19
HMGN1-211ENST00000471260 RNASE9P60153 205 aaKnown RBP13.89□□□□□ -0.19
HMGN1-211ENST00000471260 ELAVL3Q14576 367 aaKnown RBP13.89□□□□□ -0.19
HMGN1-211ENST00000471260 TEAD4Q15561 434 aa13.89□□□□□ -0.19
HMGN1-211ENST00000471260 CST6Q15828 149 aa13.89□□□□□ -0.19
HMGN1-211ENST00000471260 FAM102AQ5T9C2 384 aaPredicted RBP13.89□□□□□ -0.19
HMGN1-211ENST00000471260 NOP9Q86U38 636 aaKnown RBP13.89□□□□□ -0.19
HMGN1-211ENST00000471260 IGSF8Q969P0 613 aa13.89□□□□□ -0.19
HMGN1-211ENST00000471260 BIRC7Q96CA5 298 aa13.89□□□□□ -0.19
HMGN1-211ENST00000471260 FAM129BQ96TA1 746 aa13.89□□□□□ -0.19
HMGN1-211ENST00000471260 FEM1AQ9BSK4 669 aa13.89□□□□□ -0.19
HMGN1-211ENST00000471260 TKTL2Q9H0I9 626 aa13.89□□□□□ -0.19
Retrieved 100 of 20,778 RNA–protein pairs in 19.5 ms