RNA–Protein interactions for RNA: ENST00000470083.5

LSM2-209, Transcript of LSM2 homolog, U6 small nuclear RNA and mRNA degradation associated, humanhuman

TSL 2

Gene LSM2, Length 641 nt, Biotype processed transcript, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LSM2-209ENST00000470083 ERVW-1Q9UQF0 538 aa12.43□□□□□ -0.42
LSM2-209ENST00000470083 PCDHGA7Q9Y5G6 932 aa12.43□□□□□ -0.42
LSM2-209ENST00000470083 CCDC187A0A096LP49 1063 aa12.42□□□□□ -0.42
LSM2-209ENST00000470083 IRAK2O43187 625 aa12.42□□□□□ -0.42
LSM2-209ENST00000470083 NOBOXO60393 691 aa12.42□□□□□ -0.42
LSM2-209ENST00000470083 CENPBP07199 599 aaPredicted RBP12.42□□□□□ -0.42
LSM2-209ENST00000470083 METAP1P53582 386 aa12.42□□□□□ -0.42
LSM2-209ENST00000470083 FOXK1P85037 733 aa12.42□□□□□ -0.42
LSM2-209ENST00000470083 TBR1Q16650 682 aa12.42□□□□□ -0.42
LSM2-209ENST00000470083 CDKN3Q16667 212 aa12.42□□□□□ -0.42
LSM2-209ENST00000470083 ZACNQ401N2 412 aa12.42□□□□□ -0.42
LSM2-209ENST00000470083 KMT5BQ4FZB7 885 aa12.42□□□□□ -0.42
LSM2-209ENST00000470083 PPP1R26Q5T8A7 1209 aaPredicted RBP12.42□□□□□ -0.42
LSM2-209ENST00000470083 PM20D1Q6GTS8 502 aa12.42□□□□□ -0.42
LSM2-209ENST00000470083 SPOPLQ6IQ16 392 aa12.42□□□□□ -0.42
LSM2-209ENST00000470083 ZCCHC8Q6NZY4 707 aaKnown RBP12.42□□□□□ -0.42
LSM2-209ENST00000470083 GUSBP11Q6P575 273 aa12.42□□□□□ -0.42
LSM2-209ENST00000470083 RFWD3Q6PCD5 774 aa12.42□□□□□ -0.42
LSM2-209ENST00000470083 FAM26EQ8N5C1 309 aa12.42□□□□□ -0.42
LSM2-209ENST00000470083 PTPRN2Q92932 1015 aa12.42□□□□□ -0.42
LSM2-209ENST00000470083 UBXN6Q9BZV1 441 aa12.42□□□□□ -0.42
LSM2-209ENST00000470083 EPN3Q9H201 632 aa12.42□□□□□ -0.42
LSM2-209ENST00000470083 SFMBT1Q9UHJ3 866 aa12.42□□□□□ -0.42
LSM2-209ENST00000470083 FBXO2Q9UK22 296 aaPredicted RBP12.42□□□□□ -0.42
LSM2-209ENST00000470083 UTP20O75691 2785 aaKnown RBP12.42□□□□□ -0.42
LSM2-209ENST00000470083 A0A087X0B3 334 aa12.41□□□□□ -0.42
LSM2-209ENST00000470083 CPED1A4D0V7 1026 aa12.41□□□□□ -0.42
LSM2-209ENST00000470083 EME2A4GXA9 379 aaPredicted RBP12.41□□□□□ -0.42
LSM2-209ENST00000470083 EXOC3O60645 756 aa12.41□□□□□ -0.42
LSM2-209ENST00000470083 NEBLO76041 1014 aa12.41□□□□□ -0.42
LSM2-209ENST00000470083 ZBED1O96006 694 aa12.41□□□□□ -0.42
LSM2-209ENST00000470083 SLC5A2P31639 672 aa12.41□□□□□ -0.42
LSM2-209ENST00000470083 CTSOP43234 321 aaPredicted RBP12.41□□□□□ -0.42
LSM2-209ENST00000470083 PDX1P52945 283 aa12.41□□□□□ -0.42
LSM2-209ENST00000470083 ECT2LQ008S8 904 aa12.41□□□□□ -0.42
LSM2-209ENST00000470083 SRSF6Q13247 344 aaKnown RBP12.41□□□□□ -0.42
LSM2-209ENST00000470083 FAM133BQ5BKY9 247 aaKnown RBP12.41□□□□□ -0.42
LSM2-209ENST00000470083 PITRM1Q5JRX3 1037 aa12.41□□□□□ -0.42
LSM2-209ENST00000470083 FAM26FQ5R3K3 315 aa12.41□□□□□ -0.42
LSM2-209ENST00000470083 AGBL4Q5VU57 503 aa12.41□□□□□ -0.42
LSM2-209ENST00000470083 BHLHA9Q7RTU4 235 aa12.41□□□□□ -0.42
LSM2-209ENST00000470083 EFL1Q7Z2Z2 1120 aaKnown RBP12.41□□□□□ -0.42
LSM2-209ENST00000470083 BRAPQ7Z569 592 aa12.41□□□□□ -0.42
LSM2-209ENST00000470083 C14orf80Q86SX3 495 aa12.41□□□□□ -0.42
LSM2-209ENST00000470083 PIGZQ86VD9 579 aa12.41□□□□□ -0.42
LSM2-209ENST00000470083 NELFCDQ8IXH7 590 aa12.41□□□□□ -0.42
LSM2-209ENST00000470083 HJURPQ8NCD3 748 aaPredicted RBP12.41□□□□□ -0.42
LSM2-209ENST00000470083 RNF139Q8WU17 664 aa12.41□□□□□ -0.42
LSM2-209ENST00000470083 SPAG5Q96R06 1193 aa12.41□□□□□ -0.42
LSM2-209ENST00000470083 CALN1Q9BXU9 219 aa12.41□□□□□ -0.42
LSM2-209ENST00000470083 CAAP1Q9H8G2 361 aa12.41□□□□□ -0.42
LSM2-209ENST00000470083 CYP3A43Q9HB55 503 aa12.41□□□□□ -0.42
LSM2-209ENST00000470083 PREBQ9HCU5 417 aa12.41□□□□□ -0.42
LSM2-209ENST00000470083 STIM2Q9P246 746 aa12.41□□□□□ -0.42
LSM2-209ENST00000470083 CGNQ9P2M7 1197 aaKnown RBP12.41□□□□□ -0.42
LSM2-209ENST00000470083 SLCO3A1Q9UIG8 710 aa12.41□□□□□ -0.42
LSM2-209ENST00000470083 PCDHGA4Q9Y5G9 962 aa12.41□□□□□ -0.42
LSM2-209ENST00000470083 SRPRBQ9Y5M8 271 aaKnown RBP12.41□□□□□ -0.42
LSM2-209ENST00000470083 ABCA12Q86UK0 2595 aa12.41□□□□□ -0.42
LSM2-209ENST00000470083 MSI1O43347 362 aaKnown RBP12.4□□□□□ -0.42
LSM2-209ENST00000470083 EIF5BO60841 1220 aaKnown RBP12.4□□□□□ -0.42
LSM2-209ENST00000470083 SLC6A4P31645 630 aa12.4□□□□□ -0.42
LSM2-209ENST00000470083 SLC11A2P49281 568 aa12.4□□□□□ -0.42
LSM2-209ENST00000470083 TKTL1P51854 596 aa12.4□□□□□ -0.42
LSM2-209ENST00000470083 HNRNPKP61978 463 aaKnown RBP eCLIP12.4□□□□□ -0.42
LSM2-209ENST00000470083 CDH18Q13634 790 aa12.4□□□□□ -0.42
LSM2-209ENST00000470083 TGIF1Q15583 401 aa12.4□□□□□ -0.42
LSM2-209ENST00000470083 RNF219Q5W0B1 726 aaPredicted RBP12.4□□□□□ -0.42
LSM2-209ENST00000470083 ZNF548Q8NEK5 533 aaPredicted RBP12.4□□□□□ -0.42
LSM2-209ENST00000470083 OR13H1Q8NG92 308 aa12.4□□□□□ -0.42
LSM2-209ENST00000470083 WDR48Q8TAF3 677 aa12.4□□□□□ -0.42
LSM2-209ENST00000470083 ZNF564Q8TBZ8 553 aaPredicted RBP12.4□□□□□ -0.42
LSM2-209ENST00000470083 LIN37Q96GY3 246 aaPredicted RBP12.4□□□□□ -0.42
LSM2-209ENST00000470083 PRICKLE1Q96MT3 831 aaPredicted RBP12.4□□□□□ -0.42
LSM2-209ENST00000470083 CLIC6Q96NY7 704 aa12.4□□□□□ -0.42
LSM2-209ENST00000470083 MYOCQ99972 504 aa12.4□□□□□ -0.42
LSM2-209ENST00000470083 ULBP1Q9BZM6 244 aa12.4□□□□□ -0.42
LSM2-209ENST00000470083 DNAI2Q9GZS0 605 aa12.4□□□□□ -0.42
LSM2-209ENST00000470083 TFIP11Q9UBB9 837 aaKnown RBP12.4□□□□□ -0.42
LSM2-209ENST00000470083 GOLGA6L7A0A1B0GV03 622 aa12.39□□□□□ -0.43
LSM2-209ENST00000470083 TYW5A2RUC4 315 aaKnown RBP12.39□□□□□ -0.43
LSM2-209ENST00000470083 BLACEA4D250 179 aa12.39□□□□□ -0.43
LSM2-209ENST00000470083 PLD2O14939 933 aa12.39□□□□□ -0.43
LSM2-209ENST00000470083 SLC31A1O15431 190 aa12.39□□□□□ -0.43
LSM2-209ENST00000470083 MOCS3O95396 460 aa12.39□□□□□ -0.43
LSM2-209ENST00000470083 IGLV3-27P01718 113 aa12.39□□□□□ -0.43
LSM2-209ENST00000470083 LIPCP11150 499 aa12.39□□□□□ -0.43
LSM2-209ENST00000470083 PRLRP16471 622 aa12.39□□□□□ -0.43
LSM2-209ENST00000470083 GJB2P29033 226 aa12.39□□□□□ -0.43
LSM2-209ENST00000470083 PIK3CAP42336 1068 aa12.39□□□□□ -0.43
LSM2-209ENST00000470083 CCR10P46092 362 aa12.39□□□□□ -0.43
LSM2-209ENST00000470083 RPS24P62847 133 aaKnown RBP12.39□□□□□ -0.43
LSM2-209ENST00000470083 CNTN1Q12860 1018 aa12.39□□□□□ -0.43
LSM2-209ENST00000470083 EIF3IQ13347 325 aaKnown RBP12.39□□□□□ -0.43
LSM2-209ENST00000470083 CLCA4Q14CN2 919 aa12.39□□□□□ -0.43
LSM2-209ENST00000470083 IGFBP7Q16270 282 aa12.39□□□□□ -0.43
LSM2-209ENST00000470083 FSCBQ5H9T9 825 aa12.39□□□□□ -0.43
LSM2-209ENST00000470083 FAM46CQ5VWP2 391 aa12.39□□□□□ -0.43
LSM2-209ENST00000470083 BSPRYQ5W0U4 402 aa12.39□□□□□ -0.43
LSM2-209ENST00000470083 NUGGCQ68CJ6 796 aa12.39□□□□□ -0.43
Retrieved 100 of 20,778 RNA–protein pairs in 19.1 ms