RNA–Protein interactions for RNA: ENST00000467681.5

SSBP1-206, Transcript of single stranded DNA binding protein 1, humanhuman

TSL 2

Gene SSBP1, Length 630 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SSBP1-206ENST00000467681 CACNA2D2Q9NY47 1150 aa14□□□□□ -0.17
SSBP1-206ENST00000467681 EBF1Q9UH73 591 aa14□□□□□ -0.17
SSBP1-206ENST00000467681 USP18Q9UMW8 372 aa14□□□□□ -0.17
SSBP1-206ENST00000467681 PCDHGA2Q9Y5H1 932 aa14□□□□□ -0.17
SSBP1-206ENST00000467681 PCDHA13Q9Y5I0 950 aa14□□□□□ -0.17
SSBP1-206ENST00000467681 ILVBLA1L0T0 632 aa13.99□□□□□ -0.17
SSBP1-206ENST00000467681 SOWAHDA6NJG2 315 aa13.99□□□□□ -0.17
SSBP1-206ENST00000467681 MTA2O94776 668 aa13.99□□□□□ -0.17
SSBP1-206ENST00000467681 PROSCO94903 275 aa13.99□□□□□ -0.17
SSBP1-206ENST00000467681 IL1R2P27930 398 aa13.99□□□□□ -0.17
SSBP1-206ENST00000467681 OR1E1P30953 314 aa13.99□□□□□ -0.17
SSBP1-206ENST00000467681 IL12RB1P42701 662 aa13.99□□□□□ -0.17
SSBP1-206ENST00000467681 ECT2LQ008S8 904 aa13.99□□□□□ -0.17
SSBP1-206ENST00000467681 C6orf118Q5T5N4 469 aa13.99□□□□□ -0.17
SSBP1-206ENST00000467681 RNF219Q5W0B1 726 aaPredicted RBP13.99□□□□□ -0.17
SSBP1-206ENST00000467681 HEATR6Q6AI08 1181 aaKnown RBP13.99□□□□□ -0.17
SSBP1-206ENST00000467681 ZNF783Q6ZMS7 281 aa13.99□□□□□ -0.17
SSBP1-206ENST00000467681 TFAP2DQ7Z6R9 452 aa13.99□□□□□ -0.17
SSBP1-206ENST00000467681 NLRP14Q86W24 1093 aa13.99□□□□□ -0.17
SSBP1-206ENST00000467681 LONP2Q86WA8 852 aa13.99□□□□□ -0.17
SSBP1-206ENST00000467681 KDM1BQ8NB78 822 aa13.99□□□□□ -0.17
SSBP1-206ENST00000467681 TBC1D31Q96DN5 1066 aa13.99□□□□□ -0.17
SSBP1-206ENST00000467681 HHIPQ96QV1 700 aa13.99□□□□□ -0.17
SSBP1-206ENST00000467681 BAG1Q99933 345 aaPredicted RBP13.99□□□□□ -0.17
SSBP1-206ENST00000467681 TMEM245Q9H330 911 aa13.99□□□□□ -0.17
SSBP1-206ENST00000467681 CD248Q9HCU0 757 aa13.99□□□□□ -0.17
SSBP1-206ENST00000467681 POLMQ9NP87 494 aaPredicted RBP13.99□□□□□ -0.17
SSBP1-206ENST00000467681 OSGEPQ9NPF4 335 aa13.99□□□□□ -0.17
SSBP1-206ENST00000467681 GPATCH2LQ9NWQ4 482 aa13.99□□□□□ -0.17
SSBP1-206ENST00000467681 SUN2Q9UH99 717 aa13.99□□□□□ -0.17
SSBP1-206ENST00000467681 LCMT1Q9UIC8 334 aa13.99□□□□□ -0.17
SSBP1-206ENST00000467681 ERVW-1Q9UQF0 538 aa13.99□□□□□ -0.17
SSBP1-206ENST00000467681 GOLGA6L6A8MZA4 724 aa13.98□□□□□ -0.17
SSBP1-206ENST00000467681 AXIN1O15169 862 aa13.98□□□□□ -0.17
SSBP1-206ENST00000467681 CREB3O43889 395 aa13.98□□□□□ -0.17
SSBP1-206ENST00000467681 LILRB5O75023 590 aa13.98□□□□□ -0.17
SSBP1-206ENST00000467681 ALDH1A2O94788 518 aa13.98□□□□□ -0.17
SSBP1-206ENST00000467681 NDUFA10O95299 355 aa13.98□□□□□ -0.17
SSBP1-206ENST00000467681 RHOCP08134 193 aa13.98□□□□□ -0.17
SSBP1-206ENST00000467681 SRPRAP08240 638 aaKnown RBP13.98□□□□□ -0.17
SSBP1-206ENST00000467681 HOXB2P14652 356 aa13.98□□□□□ -0.17
SSBP1-206ENST00000467681 EPHB2P29323 1055 aa13.98□□□□□ -0.17
SSBP1-206ENST00000467681 HTR7P34969 479 aa13.98□□□□□ -0.17
SSBP1-206ENST00000467681 ARHGAP25P42331 645 aa13.98□□□□□ -0.17
SSBP1-206ENST00000467681 CTSOP43234 321 aaPredicted RBP13.98□□□□□ -0.17
SSBP1-206ENST00000467681 HCAR3P49019 387 aa13.98□□□□□ -0.17
SSBP1-206ENST00000467681 PXNP49023 591 aaPredicted RBP13.98□□□□□ -0.17
SSBP1-206ENST00000467681 MAPKAPK2P49137 400 aa13.98□□□□□ -0.17
SSBP1-206ENST00000467681 VASPP50552 380 aaPredicted RBP13.98□□□□□ -0.17
SSBP1-206ENST00000467681 NHLH1Q02575 133 aa13.98□□□□□ -0.17
SSBP1-206ENST00000467681 CA9Q16790 459 aa13.98□□□□□ -0.17
SSBP1-206ENST00000467681 FNDC3BQ53EP0 1204 aaKnown RBP13.98□□□□□ -0.17
SSBP1-206ENST00000467681 DAB2IPQ5VWQ8 1189 aa13.98□□□□□ -0.17
SSBP1-206ENST00000467681 KIAA1211LQ6NV74 962 aa13.98□□□□□ -0.17
SSBP1-206ENST00000467681 SERPINA13PQ6UXR4 307 aa13.98□□□□□ -0.17
SSBP1-206ENST00000467681 RAD9BQ6WBX8 426 aa13.98□□□□□ -0.17
SSBP1-206ENST00000467681 WDR5BQ86VZ2 330 aa13.98□□□□□ -0.17
SSBP1-206ENST00000467681 RASSF3Q86WH2 238 aa13.98□□□□□ -0.17
SSBP1-206ENST00000467681 RHOT2Q8IXI1 618 aa13.98□□□□□ -0.17
SSBP1-206ENST00000467681 RFFLQ8WZ73 363 aa13.98□□□□□ -0.17
SSBP1-206ENST00000467681 MRGPRX3Q96LB0 322 aa13.98□□□□□ -0.17
SSBP1-206ENST00000467681 EPAS1Q99814 870 aa13.98□□□□□ -0.17
SSBP1-206ENST00000467681 SNRNP25Q9BV90 132 aaKnown RBP13.98□□□□□ -0.17
SSBP1-206ENST00000467681 DHX35Q9H5Z1 703 aaKnown RBP13.98□□□□□ -0.17
SSBP1-206ENST00000467681 GRPEL1Q9HAV7 217 aa13.98□□□□□ -0.17
SSBP1-206ENST00000467681 LUC7LQ9NQ29 371 aaKnown RBP13.98□□□□□ -0.17
SSBP1-206ENST00000467681 TMEM248Q9NWD8 314 aa13.98□□□□□ -0.17
SSBP1-206ENST00000467681 SLCO3A1Q9UIG8 710 aa13.98□□□□□ -0.17
SSBP1-206ENST00000467681 VPS28Q9UK41 221 aa13.98□□□□□ -0.17
SSBP1-206ENST00000467681 AP4E1Q9UPM8 1137 aa13.98□□□□□ -0.17
SSBP1-206ENST00000467681 NEU3Q9UQ49 428 aa13.98□□□□□ -0.17
SSBP1-206ENST00000467681 EP300Q09472 2414 aaPredicted RBP13.98□□□□□ -0.17
SSBP1-206ENST00000467681 NUP205Q92621 2012 aa13.97□□□□□ -0.17
SSBP1-206ENST00000467681 DOCK4Q8N1I0 1966 aa13.97□□□□□ -0.17
SSBP1-206ENST00000467681 A0A0D9SEW6 157 aa13.97□□□□□ -0.17
SSBP1-206ENST00000467681 GOLGA6L3A6NEY3 463 aa13.97□□□□□ -0.17
SSBP1-206ENST00000467681 WASH4PA8MWX3 477 aa13.97□□□□□ -0.17
SSBP1-206ENST00000467681 ZBTB24O43167 697 aaPredicted RBP13.97□□□□□ -0.17
SSBP1-206ENST00000467681 HRO43593 1189 aa13.97□□□□□ -0.17
SSBP1-206ENST00000467681 SYNCRIPO60506 623 aaKnown RBP13.97□□□□□ -0.17
SSBP1-206ENST00000467681 RARAP10276 462 aa13.97□□□□□ -0.17
SSBP1-206ENST00000467681 HLA-EP13747 358 aa13.97□□□□□ -0.17
SSBP1-206ENST00000467681 TCF4P15884 667 aa13.97□□□□□ -0.17
SSBP1-206ENST00000467681 PRKCHP24723 683 aa13.97□□□□□ -0.17
SSBP1-206ENST00000467681 CNR2P34972 360 aa13.97□□□□□ -0.17
SSBP1-206ENST00000467681 NBL1P41271 181 aa13.97□□□□□ -0.17
SSBP1-206ENST00000467681 ZNF135P52742 658 aaPredicted RBP13.97□□□□□ -0.17
SSBP1-206ENST00000467681 GSDMDP57764 484 aa13.97□□□□□ -0.17
SSBP1-206ENST00000467681 ST8SIA6P61647 398 aa13.97□□□□□ -0.17
SSBP1-206ENST00000467681 GNA12Q03113 381 aa13.97□□□□□ -0.17
SSBP1-206ENST00000467681 STARD3Q14849 445 aa13.97□□□□□ -0.17
SSBP1-206ENST00000467681 HADHQ16836 314 aaKnown RBP13.97□□□□□ -0.17
SSBP1-206ENST00000467681 TMEM139Q8IV31 216 aa13.97□□□□□ -0.17
SSBP1-206ENST00000467681 RTL3Q8N8U3 475 aaKnown RBP13.97□□□□□ -0.17
SSBP1-206ENST00000467681 TEKT4Q8WW24 435 aa13.97□□□□□ -0.17
SSBP1-206ENST00000467681 MYO19Q96H55 970 aa13.97□□□□□ -0.17
SSBP1-206ENST00000467681 KCTD15Q96SI1 283 aaPredicted RBP13.97□□□□□ -0.17
SSBP1-206ENST00000467681 PSMB7Q99436 277 aa13.97□□□□□ -0.17
SSBP1-206ENST00000467681 MUC3BQ9H195 1237 aa13.97□□□□□ -0.17
SSBP1-206ENST00000467681 CATSPERBQ9H7T0 1116 aa13.97□□□□□ -0.17
Retrieved 100 of 20,778 RNA–protein pairs in 20.1 ms