RNA–Protein interactions for RNA: ENST00000465591.1

LIME1-203, Transcript of Lck interacting transmembrane adaptor 1, humanhuman

TSL 2

Gene LIME1, Length 680 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LIME1-203ENST00000465591 FOXJ1Q92949 421 aa22.44■■□□□ 1.18
LIME1-203ENST00000465591 C11orf70Q9BRQ4 267 aa22.44■■□□□ 1.18
LIME1-203ENST00000465591 NUP58Q9BVL2 599 aa22.44■■□□□ 1.18
LIME1-203ENST00000465591 RSPH9Q9H1X1 276 aaPredicted RBP22.44■■□□□ 1.18
LIME1-203ENST00000465591 FBRSQ9HAH7 460 aa22.44■■□□□ 1.18
LIME1-203ENST00000465591 METTL12A8MUP2 240 aa22.43■■□□□ 1.18
LIME1-203ENST00000465591 UNGP13051 313 aaPredicted RBP22.43■■□□□ 1.18
LIME1-203ENST00000465591 ARID5BQ14865 1188 aa22.43■■□□□ 1.18
LIME1-203ENST00000465591 UAP1L1Q3KQV9 507 aa22.43■■□□□ 1.18
LIME1-203ENST00000465591 DCAF12L1Q5VU92 463 aa22.43■■□□□ 1.18
LIME1-203ENST00000465591 ZNF776Q68DI1 518 aaPredicted RBP22.43■■□□□ 1.18
LIME1-203ENST00000465591 MSANTD4Q8NCY6 345 aa22.43■■□□□ 1.18
LIME1-203ENST00000465591 CADM4Q8NFZ8 388 aa22.43■■□□□ 1.18
LIME1-203ENST00000465591 CEP76Q8TAP6 659 aa22.43■■□□□ 1.18
LIME1-203ENST00000465591 BPIFA3Q9BQP9 254 aa22.43■■□□□ 1.18
LIME1-203ENST00000465591 C6orf106Q9H6K1 298 aaPredicted RBP22.43■■□□□ 1.18
LIME1-203ENST00000465591 OR51B4Q9Y5P0 310 aa22.43■■□□□ 1.18
LIME1-203ENST00000465591 SLCO1B1Q9Y6L6 691 aa22.43■■□□□ 1.18
LIME1-203ENST00000465591 MEI4A8MW99 385 aa22.42■■□□□ 1.18
LIME1-203ENST00000465591 GIPC1O14908 333 aa22.42■■□□□ 1.18
LIME1-203ENST00000465591 KCNK5O95279 499 aa22.42■■□□□ 1.18
LIME1-203ENST00000465591 ADRB1P08588 477 aa22.42■■□□□ 1.18
LIME1-203ENST00000465591 VAV1P15498 845 aa22.42■■□□□ 1.18
LIME1-203ENST00000465591 SLC12A1Q13621 1099 aa22.42■■□□□ 1.18
LIME1-203ENST00000465591 JOSD2Q8TAC2 188 aa22.42■■□□□ 1.18
LIME1-203ENST00000465591 PTPRN2Q92932 1015 aa22.42■■□□□ 1.18
LIME1-203ENST00000465591 FUCA2Q9BTY2 467 aa22.42■■□□□ 1.18
LIME1-203ENST00000465591 SERGEFQ9UGK8 458 aa22.42■■□□□ 1.18
LIME1-203ENST00000465591 F9P00740 461 aa22.41■■□□□ 1.18
LIME1-203ENST00000465591 DNTTP04053 509 aa22.41■■□□□ 1.18
LIME1-203ENST00000465591 ZBTB16Q05516 673 aa22.41■■□□□ 1.18
LIME1-203ENST00000465591 MTA1Q13330 715 aa22.41■■□□□ 1.18
LIME1-203ENST00000465591 WDR45BQ5MNZ6 344 aa22.41■■□□□ 1.18
LIME1-203ENST00000465591 SYCP2LQ5T4T6 812 aa22.41■■□□□ 1.18
LIME1-203ENST00000465591 SH3PXD2AQ5TCZ1 1133 aa22.41■■□□□ 1.18
LIME1-203ENST00000465591 DAB2IPQ5VWQ8 1189 aa22.41■■□□□ 1.18
LIME1-203ENST00000465591 TRIM72Q6ZMU5 477 aa22.41■■□□□ 1.18
LIME1-203ENST00000465591 SND1Q7KZF4 910 aaKnown RBP eCLIP22.41■■□□□ 1.18
LIME1-203ENST00000465591 ARCQ7LC44 396 aa22.41■■□□□ 1.18
LIME1-203ENST00000465591 FAM131BQ86XD5 332 aa22.41■■□□□ 1.18
LIME1-203ENST00000465591 ZCCHC9Q8N567 271 aaKnown RBP22.41■■□□□ 1.18
LIME1-203ENST00000465591 FAM129BQ96TA1 746 aa22.41■■□□□ 1.18
LIME1-203ENST00000465591 FEM1AQ9BSK4 669 aa22.41■■□□□ 1.18
LIME1-203ENST00000465591 GTPBP2Q9BX10 602 aaKnown RBP22.41■■□□□ 1.18
LIME1-203ENST00000465591 PABPC3Q9H361 631 aaKnown RBP22.41■■□□□ 1.18
LIME1-203ENST00000465591 TBC1D30Q9Y2I9 924 aa22.41■■□□□ 1.18
LIME1-203ENST00000465591 ZNF559-ZNF177A0A0A6YYI6 481 aaPredicted RBP22.4■■□□□ 1.18
LIME1-203ENST00000465591 EDDM13A0A1B0GTR0 161 aa22.4■■□□□ 1.18
LIME1-203ENST00000465591 TARSL2A2RTX5 802 aaKnown RBP22.4■■□□□ 1.18
LIME1-203ENST00000465591 DRGXA6NNA5 263 aa22.4■■□□□ 1.18
LIME1-203ENST00000465591 MID1O15344 667 aa22.4■■□□□ 1.18
LIME1-203ENST00000465591 CLDN11O75508 207 aa22.4■■□□□ 1.18
LIME1-203ENST00000465591 ENDOD1O94919 500 aa22.4■■□□□ 1.18
LIME1-203ENST00000465591 RDXP35241 583 aaKnown RBP22.4■■□□□ 1.18
LIME1-203ENST00000465591 CDH4P55283 916 aa22.4■■□□□ 1.18
LIME1-203ENST00000465591 ATP11AP98196 1134 aa22.4■■□□□ 1.18
LIME1-203ENST00000465591 GFPT1Q06210 699 aaPredicted RBP22.4■■□□□ 1.18
LIME1-203ENST00000465591 ZNF177Q13360 481 aaPredicted RBP22.4■■□□□ 1.18
LIME1-203ENST00000465591 CLEC16AQ2KHT3 1053 aa22.4■■□□□ 1.18
LIME1-203ENST00000465591 C15orf59Q2T9L4 293 aaPredicted RBP22.4■■□□□ 1.18
LIME1-203ENST00000465591 N4BP2L1Q5TBK1 243 aaPredicted RBP22.4■■□□□ 1.18
LIME1-203ENST00000465591 RNF219Q5W0B1 726 aaPredicted RBP22.4■■□□□ 1.18
LIME1-203ENST00000465591 PSAPL1Q6NUJ1 521 aa22.4■■□□□ 1.18
LIME1-203ENST00000465591 MMAAQ8IVH4 418 aaKnown RBP22.4■■□□□ 1.18
LIME1-203ENST00000465591 STK40Q8N2I9 435 aa22.4■■□□□ 1.18
LIME1-203ENST00000465591 C1orf216Q8TAB5 229 aa22.4■■□□□ 1.18
LIME1-203ENST00000465591 FRS2Q8WU20 508 aa22.4■■□□□ 1.18
LIME1-203ENST00000465591 RXFP2Q8WXD0 754 aa22.4■■□□□ 1.18
LIME1-203ENST00000465591 NAT10Q9H0A0 1025 aaKnown RBP22.4■■□□□ 1.18
LIME1-203ENST00000465591 MIR1-1HGQ9H1L0 117 aa22.4■■□□□ 1.18
LIME1-203ENST00000465591 RTN4Q9NQC3 1192 aaKnown RBP22.4■■□□□ 1.18
LIME1-203ENST00000465591 MPP6Q9NZW5 540 aa22.4■■□□□ 1.18
LIME1-203ENST00000465591 EIF2B4Q9UI10 523 aaKnown RBP22.4■■□□□ 1.18
LIME1-203ENST00000465591 ARHGAP33O14559 1287 aa22.39■■□□□ 1.17
LIME1-203ENST00000465591 CST6Q15828 149 aa22.39■■□□□ 1.17
LIME1-203ENST00000465591 CCDC14Q49A88 953 aa22.39■■□□□ 1.17
LIME1-203ENST00000465591 RABEPKQ7Z6M1 372 aa22.39■■□□□ 1.17
LIME1-203ENST00000465591 C1orf74Q96LT6 269 aa22.39■■□□□ 1.17
LIME1-203ENST00000465591 PSMB7Q99436 277 aa22.39■■□□□ 1.17
LIME1-203ENST00000465591 BTBD1Q9H0C5 482 aa22.39■■□□□ 1.17
LIME1-203ENST00000465591 SUSD2Q9UGT4 822 aa22.39■■□□□ 1.17
LIME1-203ENST00000465591 ACACBO00763 2458 aa22.38■■□□□ 1.17
LIME1-203ENST00000465591 CABIN1Q9Y6J0 2220 aa22.38■■□□□ 1.17
LIME1-203ENST00000465591 IGLV3-10A0A075B6K4 115 aa22.38■■□□□ 1.17
LIME1-203ENST00000465591 C2CD4BA6NLJ0 364 aa22.38■■□□□ 1.17
LIME1-203ENST00000465591 E9PAM4 449 aa22.38■■□□□ 1.17
LIME1-203ENST00000465591 SEMA4FO95754 770 aa22.38■■□□□ 1.17
LIME1-203ENST00000465591 ZNF165P49910 485 aa22.38■■□□□ 1.17
LIME1-203ENST00000465591 OXCT1P55809 520 aa22.38■■□□□ 1.17
LIME1-203ENST00000465591 SULT2A1Q06520 285 aa22.38■■□□□ 1.17
LIME1-203ENST00000465591 IQCB1Q15051 598 aa22.38■■□□□ 1.17
LIME1-203ENST00000465591 CDO1Q16878 200 aa22.38■■□□□ 1.17
LIME1-203ENST00000465591 TTC31Q49AM3 519 aaPredicted RBP22.38■■□□□ 1.17
LIME1-203ENST00000465591 TFAP2DQ7Z6R9 452 aa22.38■■□□□ 1.17
LIME1-203ENST00000465591 PHF13Q86YI8 300 aaPredicted RBP22.38■■□□□ 1.17
LIME1-203ENST00000465591 MINDY1Q8N5J2 469 aa22.38■■□□□ 1.17
LIME1-203ENST00000465591 BAP1Q92560 729 aa22.38■■□□□ 1.17
LIME1-203ENST00000465591 AGPAT1Q99943 283 aa22.38■■□□□ 1.17
LIME1-203ENST00000465591 MAGEB5Q9BZ81 275 aa22.38■■□□□ 1.17
LIME1-203ENST00000465591 FBXL12Q9NXK8 326 aa22.38■■□□□ 1.17
Retrieved 100 of 20,778 RNA–protein pairs in 32.2 ms