RNA–Protein interactions for RNA: ENST00000465461.6

CUX1-207, Transcript of cut like homeobox 1, humanhuman

TSL 3

Gene CUX1, Length 502 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Cytosol, Exosome, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CUX1-207ENST00000465461 AP4E1Q9UPM8 1137 aa11.99□□□□□ -0.49
CUX1-207ENST00000465461 ERVW-1Q9UQF0 538 aa11.99□□□□□ -0.49
CUX1-207ENST00000465461 TBC1D30Q9Y2I9 924 aa11.99□□□□□ -0.49
CUX1-207ENST00000465461 TTC34A8MYJ7 566 aa11.98□□□□□ -0.49
CUX1-207ENST00000465461 MYO1FO00160 1098 aa11.98□□□□□ -0.49
CUX1-207ENST00000465461 DCLK1O15075 740 aa11.98□□□□□ -0.49
CUX1-207ENST00000465461 TIMM44O43615 452 aa11.98□□□□□ -0.49
CUX1-207ENST00000465461 PRPSAP2O60256 369 aa11.98□□□□□ -0.49
CUX1-207ENST00000465461 SNAP91O60641 907 aa11.98□□□□□ -0.49
CUX1-207ENST00000465461 MOCS3O95396 460 aa11.98□□□□□ -0.49
CUX1-207ENST00000465461 APBB3O95704 486 aa11.98□□□□□ -0.49
CUX1-207ENST00000465461 ATP5BP06576 529 aaKnown RBP11.98□□□□□ -0.49
CUX1-207ENST00000465461 EPHX1P07099 455 aa11.98□□□□□ -0.49
CUX1-207ENST00000465461 DLDP09622 509 aaKnown RBP11.98□□□□□ -0.49
CUX1-207ENST00000465461 DESP17661 470 aa11.98□□□□□ -0.49
CUX1-207ENST00000465461 GABRG2P18507 467 aa11.98□□□□□ -0.49
CUX1-207ENST00000465461 GLDCP23378 1020 aa11.98□□□□□ -0.49
CUX1-207ENST00000465461 L1CAMP32004 1257 aa11.98□□□□□ -0.49
CUX1-207ENST00000465461 SSR1P43307 286 aaKnown RBP11.98□□□□□ -0.49
CUX1-207ENST00000465461 MAGEA1P43355 309 aa11.98□□□□□ -0.49
CUX1-207ENST00000465461 ENPP2Q13822 863 aa11.98□□□□□ -0.49
CUX1-207ENST00000465461 PIGHQ14442 188 aaPredicted RBP11.98□□□□□ -0.49
CUX1-207ENST00000465461 MESDQ14696 234 aa11.98□□□□□ -0.49
CUX1-207ENST00000465461 LPAL2Q16609 132 aa11.98□□□□□ -0.49
CUX1-207ENST00000465461 HSF5Q4G112 596 aaPredicted RBP11.98□□□□□ -0.49
CUX1-207ENST00000465461 ATP13A4Q4VNC1 1196 aa11.98□□□□□ -0.49
CUX1-207ENST00000465461 ERMARDQ5T6L9 678 aa11.98□□□□□ -0.49
CUX1-207ENST00000465461 SERPINA13PQ6UXR4 307 aa11.98□□□□□ -0.49
CUX1-207ENST00000465461 TRMT11Q7Z4G4 463 aaKnown RBP11.98□□□□□ -0.49
CUX1-207ENST00000465461 NLRP14Q86W24 1093 aa11.98□□□□□ -0.49
CUX1-207ENST00000465461 LONP2Q86WA8 852 aa11.98□□□□□ -0.49
CUX1-207ENST00000465461 CACUL1Q86Y37 369 aa11.98□□□□□ -0.49
CUX1-207ENST00000465461 CAMKK1Q8N5S9 505 aa11.98□□□□□ -0.49
CUX1-207ENST00000465461 ZNF557Q8N988 423 aaPredicted RBP11.98□□□□□ -0.49
CUX1-207ENST00000465461 ZBTB44Q8NCP5 570 aa11.98□□□□□ -0.49
CUX1-207ENST00000465461 ATRIPQ8WXE1 791 aa11.98□□□□□ -0.49
CUX1-207ENST00000465461 RLN3Q8WXF3 142 aa11.98□□□□□ -0.49
CUX1-207ENST00000465461 HSPH1Q92598 858 aa11.98□□□□□ -0.49
CUX1-207ENST00000465461 TBC1D31Q96DN5 1066 aa11.98□□□□□ -0.49
CUX1-207ENST00000465461 PSMB7Q99436 277 aa11.98□□□□□ -0.49
CUX1-207ENST00000465461 FEM1AQ9BSK4 669 aa11.98□□□□□ -0.49
CUX1-207ENST00000465461 SPON2Q9BUD6 331 aa11.98□□□□□ -0.49
CUX1-207ENST00000465461 TMEM245Q9H330 911 aa11.98□□□□□ -0.49
CUX1-207ENST00000465461 CD248Q9HCU0 757 aa11.98□□□□□ -0.49
CUX1-207ENST00000465461 POLMQ9NP87 494 aaPredicted RBP11.98□□□□□ -0.49
CUX1-207ENST00000465461 TMEM51Q9NW97 253 aa11.98□□□□□ -0.49
CUX1-207ENST00000465461 BCCIPQ9P287 314 aaKnown RBP eCLIP11.98□□□□□ -0.49
CUX1-207ENST00000465461 PPARGC1AQ9UBK2 798 aaKnown RBP11.98□□□□□ -0.49
CUX1-207ENST00000465461 VPS28Q9UK41 221 aa11.98□□□□□ -0.49
CUX1-207ENST00000465461 PCDHA13Q9Y5I0 950 aa11.98□□□□□ -0.49
CUX1-207ENST00000465461 OR51B4Q9Y5P0 310 aa11.98□□□□□ -0.49
CUX1-207ENST00000465461 ACTL7AQ9Y615 435 aa11.98□□□□□ -0.49
CUX1-207ENST00000465461 WDFY4Q6ZS81 3184 aa11.98□□□□□ -0.49
CUX1-207ENST00000465461 MUC22E2RYF6 1773 aaPredicted RBP11.97□□□□□ -0.49
CUX1-207ENST00000465461 AXIN1O15169 862 aa11.97□□□□□ -0.49
CUX1-207ENST00000465461 VAV1P15498 845 aa11.97□□□□□ -0.49
CUX1-207ENST00000465461 NDUFV2P19404 249 aa11.97□□□□□ -0.49
CUX1-207ENST00000465461 FECHP22830 423 aa11.97□□□□□ -0.49
CUX1-207ENST00000465461 EPHB2P29323 1055 aa11.97□□□□□ -0.49
CUX1-207ENST00000465461 GJC1P36383 396 aa11.97□□□□□ -0.49
CUX1-207ENST00000465461 ACVRL1P37023 503 aa11.97□□□□□ -0.49
CUX1-207ENST00000465461 PLK1P53350 603 aa11.97□□□□□ -0.49
CUX1-207ENST00000465461 TAS2R40P59535 323 aa11.97□□□□□ -0.49
CUX1-207ENST00000465461 ECT2LQ008S8 904 aa11.97□□□□□ -0.49
CUX1-207ENST00000465461 NRG1Q02297 640 aaPredicted RBP11.97□□□□□ -0.49
CUX1-207ENST00000465461 SEMA3BQ13214 749 aa11.97□□□□□ -0.49
CUX1-207ENST00000465461 PPP6R3Q5H9R7 873 aaPredicted RBP11.97□□□□□ -0.49
CUX1-207ENST00000465461 LINGO4Q6UY18 593 aa11.97□□□□□ -0.49
CUX1-207ENST00000465461 LEKR1Q6ZMV7 388 aa11.97□□□□□ -0.49
CUX1-207ENST00000465461 WDR5BQ86VZ2 330 aa11.97□□□□□ -0.49
CUX1-207ENST00000465461 RASSF3Q86WH2 238 aa11.97□□□□□ -0.49
CUX1-207ENST00000465461 TMEM139Q8IV31 216 aa11.97□□□□□ -0.49
CUX1-207ENST00000465461 ACRBPQ8NEB7 543 aa11.97□□□□□ -0.49
CUX1-207ENST00000465461 BAG1Q99933 345 aaPredicted RBP11.97□□□□□ -0.49
CUX1-207ENST00000465461 GRPEL1Q9HAV7 217 aa11.97□□□□□ -0.49
CUX1-207ENST00000465461 IMPACTQ9P2X3 320 aa11.97□□□□□ -0.49
CUX1-207ENST00000465461 UVRAGQ9P2Y5 699 aa11.97□□□□□ -0.49
CUX1-207ENST00000465461 REXO2Q9Y3B8 237 aaKnown RBP11.97□□□□□ -0.49
CUX1-207ENST00000465461 HYOU1Q9Y4L1 999 aa11.97□□□□□ -0.49
CUX1-207ENST00000465461 EPN1Q9Y6I3 576 aaPredicted RBP11.97□□□□□ -0.49
CUX1-207ENST00000465461 DOCK4Q8N1I0 1966 aa11.97□□□□□ -0.49
CUX1-207ENST00000465461 EML5Q05BV3 1969 aa11.96□□□□□ -0.49
CUX1-207ENST00000465461 RCCD1A6NED2 376 aa11.96□□□□□ -0.49
CUX1-207ENST00000465461 K7ERQ8 282 aa11.96□□□□□ -0.49
CUX1-207ENST00000465461 EEF2KO00418 725 aaKnown RBP11.96□□□□□ -0.49
CUX1-207ENST00000465461 SYNCRIPO60506 623 aaKnown RBP11.96□□□□□ -0.49
CUX1-207ENST00000465461 LILRB5O75023 590 aa11.96□□□□□ -0.49
CUX1-207ENST00000465461 PROSCO94903 275 aa11.96□□□□□ -0.49
CUX1-207ENST00000465461 NDUFA10O95299 355 aa11.96□□□□□ -0.49
CUX1-207ENST00000465461 LCA5LO95447 670 aa11.96□□□□□ -0.49
CUX1-207ENST00000465461 MT-CO1P00395 513 aa11.96□□□□□ -0.49
CUX1-207ENST00000465461 RARAP10276 462 aa11.96□□□□□ -0.49
CUX1-207ENST00000465461 RHOQP17081 205 aa11.96□□□□□ -0.49
CUX1-207ENST00000465461 GOT1P17174 413 aa11.96□□□□□ -0.49
CUX1-207ENST00000465461 HOXA6P31267 233 aa11.96□□□□□ -0.49
CUX1-207ENST00000465461 PCK1P35558 622 aa11.96□□□□□ -0.49
CUX1-207ENST00000465461 CYLC1P35663 651 aaPredicted RBP11.96□□□□□ -0.49
CUX1-207ENST00000465461 NBL1P41271 181 aa11.96□□□□□ -0.49
CUX1-207ENST00000465461 NRLP54845 237 aa11.96□□□□□ -0.49
CUX1-207ENST00000465461 AIF1P55008 147 aa11.96□□□□□ -0.49
Retrieved 100 of 20,778 RNA–protein pairs in 37.7 ms