RNA–Protein interactions for RNA: ENST00000464541.5

PTCD3-205, Transcript of pentatricopeptide repeat domain 3, humanhuman

TSL 5

Gene PTCD3, Length 890 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTCD3-205ENST00000464541 DDIASQ8IXT1 998 aa6.56□□□□□ -1.36
PTCD3-205ENST00000464541 MORC4Q8TE76 937 aa6.56□□□□□ -1.36
PTCD3-205ENST00000464541 TBC1D20Q96BZ9 403 aa6.56□□□□□ -1.36
PTCD3-205ENST00000464541 HEY2Q9UBP5 337 aa6.56□□□□□ -1.36
PTCD3-205ENST00000464541 LAMP3Q9UQV4 416 aa6.56□□□□□ -1.36
PTCD3-205ENST00000464541 ZNF521Q96K83 1311 aa6.55□□□□□ -1.36
PTCD3-205ENST00000464541 TMEM247A6NEH6 219 aa6.55□□□□□ -1.36
PTCD3-205ENST00000464541 SAC3D1A6NKF1 404 aa6.55□□□□□ -1.36
PTCD3-205ENST00000464541 MSI1O43347 362 aaKnown RBP6.55□□□□□ -1.36
PTCD3-205ENST00000464541 CCNT1O60563 726 aaKnown RBP6.55□□□□□ -1.36
PTCD3-205ENST00000464541 HLA-DQA2P01906 255 aa6.55□□□□□ -1.36
PTCD3-205ENST00000464541 TNNT1P13805 278 aa6.55□□□□□ -1.36
PTCD3-205ENST00000464541 PKMP14618 531 aaKnown RBP6.55□□□□□ -1.36
PTCD3-205ENST00000464541 PNPLA4P41247 253 aa6.55□□□□□ -1.36
PTCD3-205ENST00000464541 NR4A2P43354 598 aa6.55□□□□□ -1.36
PTCD3-205ENST00000464541 GALNT3Q14435 633 aa6.55□□□□□ -1.36
PTCD3-205ENST00000464541 SEMA3AQ14563 771 aa6.55□□□□□ -1.36
PTCD3-205ENST00000464541 KIAA1324Q6UXG2 1013 aaKnown RBP6.55□□□□□ -1.36
PTCD3-205ENST00000464541 ANKRD42Q8N9B4 389 aa6.55□□□□□ -1.36
PTCD3-205ENST00000464541 SCARB1Q8WTV0 552 aa6.55□□□□□ -1.36
PTCD3-205ENST00000464541 FCRL4Q96PJ5 515 aa6.55□□□□□ -1.36
PTCD3-205ENST00000464541 PSMD1Q99460 953 aa6.55□□□□□ -1.36
PTCD3-205ENST00000464541 PPCSQ9HAB8 311 aa6.55□□□□□ -1.36
PTCD3-205ENST00000464541 THSD1Q9NS62 852 aa6.55□□□□□ -1.36
PTCD3-205ENST00000464541 SLC25A13Q9UJS0 675 aa6.55□□□□□ -1.36
PTCD3-205ENST00000464541 RCE1Q9Y256 329 aa6.55□□□□□ -1.36
PTCD3-205ENST00000464541 RHODO00212 210 aa6.54□□□□□ -1.36
PTCD3-205ENST00000464541 KRT38O76015 456 aa6.54□□□□□ -1.36
PTCD3-205ENST00000464541 CYP19A1P11511 503 aaPredicted RBP6.54□□□□□ -1.36
PTCD3-205ENST00000464541 CHRNA5P30532 468 aa6.54□□□□□ -1.36
PTCD3-205ENST00000464541 CIITAP33076 1130 aa6.54□□□□□ -1.36
PTCD3-205ENST00000464541 ALDH7A1P49419 539 aaKnown RBP6.54□□□□□ -1.36
PTCD3-205ENST00000464541 RHAGQ02094 409 aa6.54□□□□□ -1.36
PTCD3-205ENST00000464541 PDCLQ13371 301 aa6.54□□□□□ -1.36
PTCD3-205ENST00000464541 THOC5Q13769 683 aaKnown RBP6.54□□□□□ -1.36
PTCD3-205ENST00000464541 ANKRD45Q5TZF3 282 aa6.54□□□□□ -1.36
PTCD3-205ENST00000464541 FTSJ3Q8IY81 847 aaKnown RBP6.54□□□□□ -1.36
PTCD3-205ENST00000464541 TMEM57Q8N5G2 664 aa6.54□□□□□ -1.36
PTCD3-205ENST00000464541 CENPIQ92674 756 aaPredicted RBP6.54□□□□□ -1.36
PTCD3-205ENST00000464541 SEMA4BQ9NPR2 832 aaPredicted RBP6.54□□□□□ -1.36
PTCD3-205ENST00000464541 UTS2RQ9UKP6 389 aa6.54□□□□□ -1.36
PTCD3-205ENST00000464541 DERAQ9Y315 318 aa6.54□□□□□ -1.36
PTCD3-205ENST00000464541 TNFRSF18Q9Y5U5 241 aa6.54□□□□□ -1.36
PTCD3-205ENST00000464541 A0A0G2JK05 382 aa6.53□□□□□ -1.36
PTCD3-205ENST00000464541 NPIPB13A6NJU9 1138 aa6.53□□□□□ -1.36
PTCD3-205ENST00000464541 NPIPB5A8MRT5 1133 aa6.53□□□□□ -1.36
PTCD3-205ENST00000464541 FOXO6A8MYZ6 492 aa6.53□□□□□ -1.36
PTCD3-205ENST00000464541 ZNF814B7Z6K7 855 aa6.53□□□□□ -1.36
PTCD3-205ENST00000464541 NPIPB4C9JG80 1138 aa6.53□□□□□ -1.36
PTCD3-205ENST00000464541 TPD52L2O43399 206 aaKnown RBP6.53□□□□□ -1.36
PTCD3-205ENST00000464541 PIP5K1CO60331 668 aa6.53□□□□□ -1.36
PTCD3-205ENST00000464541 TULP3O75386 442 aa6.53□□□□□ -1.36
PTCD3-205ENST00000464541 GSTM2P28161 218 aa6.53□□□□□ -1.36
PTCD3-205ENST00000464541 PAPOLAP51003 745 aaKnown RBP6.53□□□□□ -1.36
PTCD3-205ENST00000464541 RPS6KA3P51812 740 aa6.53□□□□□ -1.36
PTCD3-205ENST00000464541 PPFIA1Q13136 1202 aa6.53□□□□□ -1.36
PTCD3-205ENST00000464541 PLK5Q496M5 336 aa6.53□□□□□ -1.36
PTCD3-205ENST00000464541 GXYLT1Q4G148 440 aa6.53□□□□□ -1.36
PTCD3-205ENST00000464541 INO80DQ53TQ3 878 aaPredicted RBP6.53□□□□□ -1.36
PTCD3-205ENST00000464541 FBXO47Q5MNV8 452 aa6.53□□□□□ -1.36
PTCD3-205ENST00000464541 PIK3CD-AS1Q5SR53 167 aa6.53□□□□□ -1.36
PTCD3-205ENST00000464541 SLC30A9Q6PML9 568 aa6.53□□□□□ -1.36
PTCD3-205ENST00000464541 LDHAL6AQ6ZMR3 332 aa6.53□□□□□ -1.36
PTCD3-205ENST00000464541 GALNT7Q86SF2 657 aa6.53□□□□□ -1.36
PTCD3-205ENST00000464541 SCN4BQ8IWT1 228 aa6.53□□□□□ -1.36
PTCD3-205ENST00000464541 MMP21Q8N119 569 aa6.53□□□□□ -1.36
PTCD3-205ENST00000464541 FAM110DQ8TAY7 271 aaPredicted RBP6.53□□□□□ -1.36
PTCD3-205ENST00000464541 CSGALNACT1Q8TDX6 532 aa6.53□□□□□ -1.36
PTCD3-205ENST00000464541 AFG1LQ8WV93 481 aa6.53□□□□□ -1.36
PTCD3-205ENST00000464541 TRIM31Q9BZY9 425 aa6.53□□□□□ -1.36
PTCD3-205ENST00000464541 ARHGAP39Q9C0H5 1083 aa6.53□□□□□ -1.36
PTCD3-205ENST00000464541 TASP1Q9H6P5 420 aa6.53□□□□□ -1.36
PTCD3-205ENST00000464541 PLEKHA2Q9HB19 425 aa6.53□□□□□ -1.36
PTCD3-205ENST00000464541 IL21RQ9HBE5 538 aa6.53□□□□□ -1.36
PTCD3-205ENST00000464541 RNF146Q9NTX7 359 aa6.53□□□□□ -1.36
PTCD3-205ENST00000464541 DECR2Q9NUI1 292 aa6.53□□□□□ -1.36
PTCD3-205ENST00000464541 POT1Q9NUX5 634 aa6.53□□□□□ -1.36
PTCD3-205ENST00000464541 ARL15Q9NXU5 204 aa6.53□□□□□ -1.36
PTCD3-205ENST00000464541 MSRB1Q9NZV6 116 aa6.53□□□□□ -1.36
PTCD3-205ENST00000464541 FEM1BQ9UK73 627 aa6.53□□□□□ -1.36
PTCD3-205ENST00000464541 C11orf97A0A1B0GVM6 126 aaPredicted RBP6.52□□□□□ -1.37
PTCD3-205ENST00000464541 CXorf65A6NEN9 183 aa6.52□□□□□ -1.37
PTCD3-205ENST00000464541 NEURL1O76050 574 aa6.52□□□□□ -1.37
PTCD3-205ENST00000464541 ACP5P13686 325 aa6.52□□□□□ -1.37
PTCD3-205ENST00000464541 HSD3B1P14060 373 aa6.52□□□□□ -1.37
PTCD3-205ENST00000464541 DHX8Q14562 1220 aaKnown RBP6.52□□□□□ -1.37
PTCD3-205ENST00000464541 INPP5JQ15735 1006 aaPredicted RBP6.52□□□□□ -1.37
PTCD3-205ENST00000464541 SMTNL2Q2TAL5 461 aa6.52□□□□□ -1.37
PTCD3-205ENST00000464541 CTXN3Q4LDR2 81 aa6.52□□□□□ -1.37
PTCD3-205ENST00000464541 IGFN1Q86VF2 1251 aa6.52□□□□□ -1.37
PTCD3-205ENST00000464541 ANKRD18AQ8IVF6 992 aa6.52□□□□□ -1.37
PTCD3-205ENST00000464541 KAT2AQ92830 837 aa6.52□□□□□ -1.37
PTCD3-205ENST00000464541 ZNF48Q96MX3 618 aaPredicted RBP6.52□□□□□ -1.37
PTCD3-205ENST00000464541 HDHD5Q9BXW7 423 aa6.52□□□□□ -1.37
PTCD3-205ENST00000464541 CHODLQ9H9P2 273 aa6.52□□□□□ -1.37
PTCD3-205ENST00000464541 SPAG4Q9NPE6 437 aa6.52□□□□□ -1.37
PTCD3-205ENST00000464541 PCDHA12Q9UN75 941 aa6.52□□□□□ -1.37
PTCD3-205ENST00000464541 METTL18O95568 372 aa6.51□□□□□ -1.37
PTCD3-205ENST00000464541 TBXAS1P24557 533 aaPredicted RBP6.51□□□□□ -1.37
PTCD3-205ENST00000464541 CCT5P48643 541 aa6.51□□□□□ -1.37
Retrieved 100 of 20,778 RNA–protein pairs in 23.9 ms