RNA–Protein interactions for RNA: ENST00000463184.1

VARS-221, Transcript of valyl-tRNA synthetase, humanhuman

TSL 2

Gene VARS, Length 619 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VARS-221ENST00000463184 JUPP14923 745 aa20.43■□□□□ 0.86
VARS-221ENST00000463184 TACR2P21452 398 aa20.43■□□□□ 0.86
VARS-221ENST00000463184 HNF1BP35680 557 aa20.43■□□□□ 0.86
VARS-221ENST00000463184 PPP1R2P41236 205 aa20.43■□□□□ 0.86
VARS-221ENST00000463184 ADPRHP54922 357 aa20.43■□□□□ 0.86
VARS-221ENST00000463184 SYPL2Q5VXT5 272 aa20.43■□□□□ 0.86
VARS-221ENST00000463184 RAP1GAP2Q684P5 730 aa20.43■□□□□ 0.86
VARS-221ENST00000463184 APCDD1Q8J025 514 aa20.43■□□□□ 0.86
VARS-221ENST00000463184 EHBP1Q8NDI1 1231 aa20.43■□□□□ 0.86
VARS-221ENST00000463184 STK32AQ8WU08 396 aa20.43■□□□□ 0.86
VARS-221ENST00000463184 ERCC4Q92889 916 aaPredicted RBP20.43■□□□□ 0.86
VARS-221ENST00000463184 SERAC1Q96JX3 654 aa20.43■□□□□ 0.86
VARS-221ENST00000463184 BTN2A3PQ96KV6 586 aa20.43■□□□□ 0.86
VARS-221ENST00000463184 RPL10LQ96L21 214 aaKnown RBP20.43■□□□□ 0.86
VARS-221ENST00000463184 ERVMER34-1Q9H9K5 563 aa20.43■□□□□ 0.86
VARS-221ENST00000463184 CNTN6Q9UQ52 1028 aa20.43■□□□□ 0.86
VARS-221ENST00000463184 TBC1D3DA0A087WVF3 549 aa20.42■□□□□ 0.86
VARS-221ENST00000463184 TBC1D3IA0A087WXS9 549 aa20.42■□□□□ 0.86
VARS-221ENST00000463184 TBC1D3EA0A087X179 549 aa20.42■□□□□ 0.86
VARS-221ENST00000463184 TBC1D3KA0A087X1G2 549 aa20.42■□□□□ 0.86
VARS-221ENST00000463184 TBC1D3FA6NER0 549 aaPredicted RBP20.42■□□□□ 0.86
VARS-221ENST00000463184 TBC1D3LB9A6J9 549 aa20.42■□□□□ 0.86
VARS-221ENST00000463184 TLR4O00206 839 aa20.42■□□□□ 0.86
VARS-221ENST00000463184 PLK4O00444 970 aa20.42■□□□□ 0.86
VARS-221ENST00000463184 IL1BP01584 269 aa20.42■□□□□ 0.86
VARS-221ENST00000463184 TBC1D3HP0C7X1 549 aa20.42■□□□□ 0.86
VARS-221ENST00000463184 MZF1P28698 734 aaPredicted RBP20.42■□□□□ 0.86
VARS-221ENST00000463184 SULT2A1Q06520 285 aa20.42■□□□□ 0.86
VARS-221ENST00000463184 ELAVL3Q14576 367 aaKnown RBP20.42■□□□□ 0.86
VARS-221ENST00000463184 ZC3H12AQ5D1E8 599 aaKnown RBP20.42■□□□□ 0.86
VARS-221ENST00000463184 C6orf118Q5T5N4 469 aa20.42■□□□□ 0.86
VARS-221ENST00000463184 TBC1D3GQ6DHY5 549 aa20.42■□□□□ 0.86
VARS-221ENST00000463184 TBC1D3CQ6IPX1 549 aa20.42■□□□□ 0.86
VARS-221ENST00000463184 CHSY1Q86X52 802 aa20.42■□□□□ 0.86
VARS-221ENST00000463184 ARHGEF19Q8IW93 802 aa20.42■□□□□ 0.86
VARS-221ENST00000463184 TBC1D3Q8IZP1 549 aaPredicted RBP20.42■□□□□ 0.86
VARS-221ENST00000463184 OXR1Q8N573 874 aa20.42■□□□□ 0.86
VARS-221ENST00000463184 MED15Q96RN5 788 aa20.42■□□□□ 0.86
VARS-221ENST00000463184 CLSTN2Q9H4D0 955 aa20.42■□□□□ 0.86
VARS-221ENST00000463184 POPDC2Q9HBU9 364 aa20.42■□□□□ 0.86
VARS-221ENST00000463184 SLC12A6Q9UHW9 1150 aa20.42■□□□□ 0.86
VARS-221ENST00000463184 EIF4E1BA6NMX2 242 aaKnown RBP20.41■□□□□ 0.86
VARS-221ENST00000463184 F5H5T6 163 aa20.41■□□□□ 0.86
VARS-221ENST00000463184 WNT9AO14904 365 aa20.41■□□□□ 0.86
VARS-221ENST00000463184 MED7O43513 233 aa20.41■□□□□ 0.86
VARS-221ENST00000463184 LATO43561 262 aa20.41■□□□□ 0.86
VARS-221ENST00000463184 TRUB2O95900 331 aaKnown RBP20.41■□□□□ 0.86
VARS-221ENST00000463184 MBD3O95983 291 aa20.41■□□□□ 0.86
VARS-221ENST00000463184 EPHA8P29322 1005 aaPredicted RBP20.41■□□□□ 0.86
VARS-221ENST00000463184 RXRGP48443 463 aa20.41■□□□□ 0.86
VARS-221ENST00000463184 NXPH1P58417 271 aa20.41■□□□□ 0.86
VARS-221ENST00000463184 DNAJC3Q13217 504 aa20.41■□□□□ 0.86
VARS-221ENST00000463184 CAMK4Q16566 473 aa20.41■□□□□ 0.86
VARS-221ENST00000463184 MEA1Q16626 185 aa20.41■□□□□ 0.86
VARS-221ENST00000463184 PRPF39Q86UA1 669 aaKnown RBP20.41■□□□□ 0.86
VARS-221ENST00000463184 EID2Q8N6I1 236 aa20.41■□□□□ 0.86
VARS-221ENST00000463184 ATP6V0D2Q8N8Y2 350 aa20.41■□□□□ 0.86
VARS-221ENST00000463184 GPT2Q8TD30 523 aa20.41■□□□□ 0.86
VARS-221ENST00000463184 NXPE2Q96DL1 559 aa20.41■□□□□ 0.86
VARS-221ENST00000463184 SLC4A5Q9BY07 1137 aa20.41■□□□□ 0.86
VARS-221ENST00000463184 KDM4CQ9H3R0 1056 aa20.41■□□□□ 0.86
VARS-221ENST00000463184 SLTMQ9NWH9 1034 aaKnown RBP eCLIP20.41■□□□□ 0.86
VARS-221ENST00000463184 IGLV3-25P01717 112 aa20.4■□□□□ 0.86
VARS-221ENST00000463184 NUDT1P36639 197 aa20.4■□□□□ 0.86
VARS-221ENST00000463184 ACADVLP49748 655 aa20.4■□□□□ 0.86
VARS-221ENST00000463184 STK19P49842 368 aaPredicted RBP20.4■□□□□ 0.86
VARS-221ENST00000463184 PLK1P53350 603 aa20.4■□□□□ 0.86
VARS-221ENST00000463184 OXCT1P55809 520 aa20.4■□□□□ 0.86
VARS-221ENST00000463184 YWHAZP63104 245 aaKnown RBP20.4■□□□□ 0.86
VARS-221ENST00000463184 TP53BP1Q12888 1972 aaPredicted RBP20.4■□□□□ 0.86
VARS-221ENST00000463184 TTC39BQ5VTQ0 682 aaPredicted RBP20.4■□□□□ 0.86
VARS-221ENST00000463184 NAPEPLDQ6IQ20 393 aa20.4■□□□□ 0.86
VARS-221ENST00000463184 DENND1BQ6P3S1 775 aa20.4■□□□□ 0.86
VARS-221ENST00000463184 FOXR2Q6PJQ5 311 aa20.4■□□□□ 0.86
VARS-221ENST00000463184 RAB11FIP1Q6WKZ4 1283 aaPredicted RBP20.4■□□□□ 0.86
VARS-221ENST00000463184 TMEM110Q86TL2 294 aa20.4■□□□□ 0.86
VARS-221ENST00000463184 MFSD2AQ8NA29 543 aa20.4■□□□□ 0.86
VARS-221ENST00000463184 FAM131CQ96AQ9 280 aa20.4■□□□□ 0.86
VARS-221ENST00000463184 KREMEN1Q96MU8 473 aa20.4■□□□□ 0.86
VARS-221ENST00000463184 BBC3Q96PG8 261 aaPredicted RBP20.4■□□□□ 0.86
VARS-221ENST00000463184 SPAG5Q96R06 1193 aa20.4■□□□□ 0.86
VARS-221ENST00000463184 PPP1R9BQ96SB3 815 aa20.4■□□□□ 0.86
VARS-221ENST00000463184 THAP9Q9H5L6 903 aa20.4■□□□□ 0.86
VARS-221ENST00000463184 KCNU1A8MYU2 1149 aa20.39■□□□□ 0.85
VARS-221ENST00000463184 CBX4O00257 560 aa20.39■□□□□ 0.85
VARS-221ENST00000463184 SLC7A4O43246 635 aa20.39■□□□□ 0.85
VARS-221ENST00000463184 MAGEC1O60732 1142 aa20.39■□□□□ 0.85
VARS-221ENST00000463184 SLC2A3P11169 496 aa20.39■□□□□ 0.85
VARS-221ENST00000463184 KRT5P13647 590 aa20.39■□□□□ 0.85
VARS-221ENST00000463184 CD44P16070 742 aaKnown RBP20.39■□□□□ 0.85
VARS-221ENST00000463184 PDGFRAP16234 1089 aa20.39■□□□□ 0.85
VARS-221ENST00000463184 DRD3P35462 400 aa20.39■□□□□ 0.85
VARS-221ENST00000463184 ABCG1P45844 678 aa20.39■□□□□ 0.85
VARS-221ENST00000463184 VASPP50552 380 aaPredicted RBP20.39■□□□□ 0.85
VARS-221ENST00000463184 KCNH2Q12809 1159 aa20.39■□□□□ 0.85
VARS-221ENST00000463184 BNIP3Q12983 259 aa20.39■□□□□ 0.85
VARS-221ENST00000463184 EIF4EBP2Q13542 120 aaPredicted RBP20.39■□□□□ 0.85
VARS-221ENST00000463184 ISM2Q6H9L7 571 aa20.39■□□□□ 0.85
VARS-221ENST00000463184 TTI2Q6NXR4 508 aa20.39■□□□□ 0.85
VARS-221ENST00000463184 DSG4Q86SJ6 1040 aa20.39■□□□□ 0.85
Retrieved 100 of 20,778 RNA–protein pairs in 21.4 ms