RNA–Protein interactions for RNA: ENST00000463020.1

SND1-203, Transcript of staphylococcal nuclease and tudor domain containing 1, humanhuman

TSL 2

Gene SND1, Length 793 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SND1-203ENST00000463020 LUC7L3O95232 432 aaKnown RBP16.21■□□□□ 0.19
SND1-203ENST00000463020 ASLP04424 464 aa16.21■□□□□ 0.19
SND1-203ENST00000463020 C1SP09871 688 aa16.21■□□□□ 0.19
SND1-203ENST00000463020 MYF5P13349 255 aa16.21■□□□□ 0.19
SND1-203ENST00000463020 SYKP43405 635 aa16.21■□□□□ 0.19
SND1-203ENST00000463020 RXRGP48443 463 aa16.21■□□□□ 0.19
SND1-203ENST00000463020 CDH18Q13634 790 aa16.21■□□□□ 0.19
SND1-203ENST00000463020 POM121L1PQ3SYA9 428 aa16.21■□□□□ 0.19
SND1-203ENST00000463020 TCERG1LQ5VWI1 586 aa16.21■□□□□ 0.19
SND1-203ENST00000463020 SYPL2Q5VXT5 272 aa16.21■□□□□ 0.19
SND1-203ENST00000463020 RAP1GAP2Q684P5 730 aa16.21■□□□□ 0.19
SND1-203ENST00000463020 TMEM270Q6UE05 265 aa16.21■□□□□ 0.19
SND1-203ENST00000463020 RAB11FIP1Q6WKZ4 1283 aaPredicted RBP16.21■□□□□ 0.19
SND1-203ENST00000463020 KRBA2Q6ZNG9 492 aa16.21■□□□□ 0.19
SND1-203ENST00000463020 UNC45BQ8IWX7 931 aa16.21■□□□□ 0.19
SND1-203ENST00000463020 SPACA3Q8IXA5 215 aa16.21■□□□□ 0.19
SND1-203ENST00000463020 ANP32BQ92688 251 aaKnown RBP16.21■□□□□ 0.19
SND1-203ENST00000463020 FAM131CQ96AQ9 280 aa16.21■□□□□ 0.19
SND1-203ENST00000463020 DNAI2Q9GZS0 605 aa16.21■□□□□ 0.19
SND1-203ENST00000463020 UCKL1Q9NWZ5 548 aa16.21■□□□□ 0.19
SND1-203ENST00000463020 USP25Q9UHP3 1055 aa16.21■□□□□ 0.19
SND1-203ENST00000463020 CFAP45Q9UL16 551 aa16.21■□□□□ 0.19
SND1-203ENST00000463020 TARSL2A2RTX5 802 aaKnown RBP16.2■□□□□ 0.18
SND1-203ENST00000463020 TRIM49BA6NDI0 452 aa16.2■□□□□ 0.18
SND1-203ENST00000463020 PYCARD-AS1I3L0S3 204 aa16.2■□□□□ 0.18
SND1-203ENST00000463020 TK2O00142 265 aa16.2■□□□□ 0.18
SND1-203ENST00000463020 SIGLEC6O43699 453 aa16.2■□□□□ 0.18
SND1-203ENST00000463020 RNASEH1O60930 286 aaKnown RBP16.2■□□□□ 0.18
SND1-203ENST00000463020 IL1BP01584 269 aa16.2■□□□□ 0.18
SND1-203ENST00000463020 EPB41P11171 864 aaKnown RBP16.2■□□□□ 0.18
SND1-203ENST00000463020 CKMT2P17540 419 aa16.2■□□□□ 0.18
SND1-203ENST00000463020 GLDCP23378 1020 aa16.2■□□□□ 0.18
SND1-203ENST00000463020 IRAK1P51617 712 aa16.2■□□□□ 0.18
SND1-203ENST00000463020 ECT2LQ008S8 904 aa16.2■□□□□ 0.18
SND1-203ENST00000463020 ATL3Q6DD88 541 aa16.2■□□□□ 0.18
SND1-203ENST00000463020 NAPEPLDQ6IQ20 393 aa16.2■□□□□ 0.18
SND1-203ENST00000463020 LRRC69Q6ZNQ3 347 aa16.2■□□□□ 0.18
SND1-203ENST00000463020 SND1Q7KZF4 910 aaKnown RBP eCLIP16.2■□□□□ 0.182e-36■■■□□ 17.5
SND1-203ENST00000463020 LGI2Q8N0V4 545 aa16.2■□□□□ 0.18
SND1-203ENST00000463020 SLC25A45Q8N413 288 aa16.2■□□□□ 0.18
SND1-203ENST00000463020 DCBLD1Q8N8Z6 715 aa16.2■□□□□ 0.18
SND1-203ENST00000463020 OR52K2Q8NGK3 314 aa16.2■□□□□ 0.18
SND1-203ENST00000463020 FRS2Q8WU20 508 aa16.2■□□□□ 0.18
SND1-203ENST00000463020 RFFLQ8WZ73 363 aa16.2■□□□□ 0.18
SND1-203ENST00000463020 IRGQQ8WZA9 623 aa16.2■□□□□ 0.18
SND1-203ENST00000463020 SLC35C1Q96A29 364 aa16.2■□□□□ 0.18
SND1-203ENST00000463020 AZIN2Q96A70 460 aa16.2■□□□□ 0.18
SND1-203ENST00000463020 NAF1Q96HR8 494 aaKnown RBP16.2■□□□□ 0.18
SND1-203ENST00000463020 CYTH4Q9UIA0 394 aa16.2■□□□□ 0.18
SND1-203ENST00000463020 TBC1D3DA0A087WVF3 549 aa16.19■□□□□ 0.18
SND1-203ENST00000463020 TBC1D3IA0A087WXS9 549 aa16.19■□□□□ 0.18
SND1-203ENST00000463020 TBC1D3EA0A087X179 549 aa16.19■□□□□ 0.18
SND1-203ENST00000463020 TBC1D3KA0A087X1G2 549 aa16.19■□□□□ 0.18
SND1-203ENST00000463020 TBC1D3FA6NER0 549 aaPredicted RBP16.19■□□□□ 0.18
SND1-203ENST00000463020 TBC1D3LB9A6J9 549 aa16.19■□□□□ 0.18
SND1-203ENST00000463020 SRPRAP08240 638 aaKnown RBP16.19■□□□□ 0.18
SND1-203ENST00000463020 TBC1D3HP0C7X1 549 aa16.19■□□□□ 0.18
SND1-203ENST00000463020 C5AR1P21730 350 aa16.19■□□□□ 0.18
SND1-203ENST00000463020 PRCPP42785 496 aa16.19■□□□□ 0.18
SND1-203ENST00000463020 ARRB1P49407 418 aaPredicted RBP16.19■□□□□ 0.18
SND1-203ENST00000463020 CXADRP78310 365 aa16.19■□□□□ 0.18
SND1-203ENST00000463020 TBC1D25Q3MII6 688 aa16.19■□□□□ 0.18
SND1-203ENST00000463020 ZSCAN23Q3MJ62 389 aa16.19■□□□□ 0.18
SND1-203ENST00000463020 TBC1D3GQ6DHY5 549 aa16.19■□□□□ 0.18
SND1-203ENST00000463020 TBC1D3CQ6IPX1 549 aa16.19■□□□□ 0.18
SND1-203ENST00000463020 KDM7AQ6ZMT4 941 aa16.19■□□□□ 0.18
SND1-203ENST00000463020 TBC1D3Q8IZP1 549 aaPredicted RBP16.19■□□□□ 0.18
SND1-203ENST00000463020 KDM1BQ8NB78 822 aa16.19■□□□□ 0.18
SND1-203ENST00000463020 GPT2Q8TD30 523 aa16.19■□□□□ 0.18
SND1-203ENST00000463020 FGF11Q92914 225 aa16.19■□□□□ 0.18
SND1-203ENST00000463020 SEMA4CQ9C0C4 833 aa16.19■□□□□ 0.18
SND1-203ENST00000463020 ERVMER34-1Q9H9K5 563 aa16.19■□□□□ 0.18
SND1-203ENST00000463020 TLR6Q9Y2C9 796 aa16.19■□□□□ 0.18
SND1-203ENST00000463020 MYO18BQ8IUG5 2567 aa16.18■□□□□ 0.18
SND1-203ENST00000463020 CETN3O15182 167 aa16.18■□□□□ 0.18
SND1-203ENST00000463020 RRP8O43159 456 aaKnown RBP16.18■□□□□ 0.18
SND1-203ENST00000463020 ADH1BP00325 375 aa16.18■□□□□ 0.18
SND1-203ENST00000463020 GIMD1P0DJR0 217 aa16.18■□□□□ 0.18
SND1-203ENST00000463020 KRT10P13645 584 aa16.18■□□□□ 0.18
SND1-203ENST00000463020 PDGFRAP16234 1089 aa16.18■□□□□ 0.18
SND1-203ENST00000463020 TACR2P21452 398 aa16.18■□□□□ 0.18
SND1-203ENST00000463020 ACP1P24666 158 aa16.18■□□□□ 0.18
SND1-203ENST00000463020 TAS2R38P59533 333 aa16.18■□□□□ 0.18
SND1-203ENST00000463020 CNTN1Q12860 1018 aa16.18■□□□□ 0.18
SND1-203ENST00000463020 PNOCQ13519 176 aa16.18■□□□□ 0.18
SND1-203ENST00000463020 ZC3H12AQ5D1E8 599 aaKnown RBP16.18■□□□□ 0.18
SND1-203ENST00000463020 AGBL4Q5VU57 503 aa16.18■□□□□ 0.18
SND1-203ENST00000463020 ANKRD40Q6AI12 368 aa16.18■□□□□ 0.18
SND1-203ENST00000463020 ARHGEF19Q8IW93 802 aa16.18■□□□□ 0.18
SND1-203ENST00000463020 MFSD2AQ8NA29 543 aa16.18■□□□□ 0.18
SND1-203ENST00000463020 ERCC4Q92889 916 aaPredicted RBP16.18■□□□□ 0.18
SND1-203ENST00000463020 SPATA32Q96LK8 384 aa16.18■□□□□ 0.18
SND1-203ENST00000463020 MYOCQ99972 504 aa16.18■□□□□ 0.18
SND1-203ENST00000463020 IRX2Q9BZI1 471 aaPredicted RBP16.18■□□□□ 0.18
SND1-203ENST00000463020 CPNE5Q9HCH3 593 aa16.18■□□□□ 0.18
SND1-203ENST00000463020 TJP2Q9UDY2 1190 aa16.18■□□□□ 0.18
SND1-203ENST00000463020 CLCA2Q9UQC9 943 aa16.18■□□□□ 0.18
SND1-203ENST00000463020 CEP83Q9Y592 693 aa16.18■□□□□ 0.18
SND1-203ENST00000463020 PCDHB4Q9Y5E5 795 aa16.18■□□□□ 0.18
SND1-203ENST00000463020 HECTD1Q9ULT8 2610 aa16.17■□□□□ 0.18
Retrieved 100 of 20,778 RNA–protein pairs in 43.7 ms