RNA–Protein interactions for RNA: ENST00000462899.1

SMC3-202, Transcript of structural maintenance of chromosomes 3, humanhuman

TSL 5

Gene SMC3, Length 777 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMC3-202ENST00000462899 DLG4P78352 724 aa8.01□□□□□ -1.13
SMC3-202ENST00000462899 OVGP1Q12889 678 aa8.01□□□□□ -1.13
SMC3-202ENST00000462899 LAPTM4AQ15012 233 aa8.01□□□□□ -1.13
SMC3-202ENST00000462899 SGSM1Q2NKQ1 1148 aa8.01□□□□□ -1.13
SMC3-202ENST00000462899 ARL13BQ3SXY8 428 aa8.01□□□□□ -1.13
SMC3-202ENST00000462899 FAM133BQ5BKY9 247 aaKnown RBP8.01□□□□□ -1.13
SMC3-202ENST00000462899 FAM26FQ5R3K3 315 aa8.01□□□□□ -1.13
SMC3-202ENST00000462899 ADGRF1Q5T601 910 aa8.01□□□□□ -1.13
SMC3-202ENST00000462899 PPP1R26Q5T8A7 1209 aaPredicted RBP8.01□□□□□ -1.13
SMC3-202ENST00000462899 CLEC18BQ6UXF7 455 aa8.01□□□□□ -1.13
SMC3-202ENST00000462899 TMEM145Q8NBT3 493 aa8.01□□□□□ -1.13
SMC3-202ENST00000462899 CLEC18CQ8NCF0 446 aa8.01□□□□□ -1.13
SMC3-202ENST00000462899 TAF4BQ92750 862 aa8.01□□□□□ -1.13
SMC3-202ENST00000462899 TMX3Q96JJ7 454 aa8.01□□□□□ -1.13
SMC3-202ENST00000462899 PRICKLE1Q96MT3 831 aaPredicted RBP8.01□□□□□ -1.13
SMC3-202ENST00000462899 DEPDC7Q96QD5 511 aa8.01□□□□□ -1.13
SMC3-202ENST00000462899 OCSTAMPQ9BR26 566 aa8.01□□□□□ -1.13
SMC3-202ENST00000462899 ARHGAP9Q9BRR9 750 aa8.01□□□□□ -1.13
SMC3-202ENST00000462899 BACH2Q9BYV9 841 aa8.01□□□□□ -1.13
SMC3-202ENST00000462899 UBXN6Q9BZV1 441 aa8.01□□□□□ -1.13
SMC3-202ENST00000462899 TRIM4Q9C037 500 aa8.01□□□□□ -1.13
SMC3-202ENST00000462899 CAAP1Q9H8G2 361 aa8.01□□□□□ -1.13
SMC3-202ENST00000462899 APOBEC3GQ9HC16 384 aaKnown RBP8.01□□□□□ -1.13
SMC3-202ENST00000462899 THSD1Q9NS62 852 aa8.01□□□□□ -1.13
SMC3-202ENST00000462899 DMAC2Q9NW81 257 aa8.01□□□□□ -1.13
SMC3-202ENST00000462899 CGNQ9P2M7 1197 aaKnown RBP8.01□□□□□ -1.13
SMC3-202ENST00000462899 NCKAP1Q9Y2A7 1128 aa8.01□□□□□ -1.13
SMC3-202ENST00000462899 HBS1LQ9Y450 684 aaKnown RBP8.01□□□□□ -1.13
SMC3-202ENST00000462899 ICE1Q9Y2F5 2266 aa8.01□□□□□ -1.13
SMC3-202ENST00000462899 LRP4O75096 1905 aa8.01□□□□□ -1.13
SMC3-202ENST00000462899 TARSL2A2RTX5 802 aaKnown RBP8□□□□□ -1.13
SMC3-202ENST00000462899 PMS2P1A4D2B8 440 aa8□□□□□ -1.13
SMC3-202ENST00000462899 SUV39H1O43463 412 aa8□□□□□ -1.13
SMC3-202ENST00000462899 SDC3O75056 442 aa8□□□□□ -1.13
SMC3-202ENST00000462899 PHACTR2O75167 634 aa8□□□□□ -1.13
SMC3-202ENST00000462899 RNASEH2AO75792 299 aaKnown RBP8□□□□□ -1.13
SMC3-202ENST00000462899 RPN1P04843 607 aaKnown RBP8□□□□□ -1.13
SMC3-202ENST00000462899 P4HA1P13674 534 aa8□□□□□ -1.13
SMC3-202ENST00000462899 GOT1P17174 413 aa8□□□□□ -1.13
SMC3-202ENST00000462899 DGKAP23743 735 aa8□□□□□ -1.13
SMC3-202ENST00000462899 VARSP26640 1264 aaKnown RBP8□□□□□ -1.13
SMC3-202ENST00000462899 SLC6A4P31645 630 aa8□□□□□ -1.13
SMC3-202ENST00000462899 SLC8A1P32418 973 aa8□□□□□ -1.13
SMC3-202ENST00000462899 TXLNAP40222 546 aa8□□□□□ -1.13
SMC3-202ENST00000462899 METAP1P53582 386 aa8□□□□□ -1.13
SMC3-202ENST00000462899 YWHAGP61981 247 aaKnown RBP eCLIP8□□□□□ -1.13
SMC3-202ENST00000462899 CLN3Q13286 438 aa8□□□□□ -1.13
SMC3-202ENST00000462899 BIRC3Q13489 604 aa8□□□□□ -1.13
SMC3-202ENST00000462899 PIK3R6Q5UE93 754 aa8□□□□□ -1.13
SMC3-202ENST00000462899 SND1Q7KZF4 910 aaKnown RBP eCLIP8□□□□□ -1.13
SMC3-202ENST00000462899 SV2AQ7L0J3 742 aa8□□□□□ -1.13
SMC3-202ENST00000462899 PRICKLE2Q7Z3G6 844 aa8□□□□□ -1.13
SMC3-202ENST00000462899 CLEC14AQ86T13 490 aa8□□□□□ -1.13
SMC3-202ENST00000462899 TRIM69Q86WT6 500 aa8□□□□□ -1.13
SMC3-202ENST00000462899 MMAAQ8IVH4 418 aaKnown RBP8□□□□□ -1.13
SMC3-202ENST00000462899 NELFCDQ8IXH7 590 aa8□□□□□ -1.13
SMC3-202ENST00000462899 ARHGAP18Q8N392 663 aa8□□□□□ -1.13
SMC3-202ENST00000462899 FIBINQ8TAL6 211 aa8□□□□□ -1.13
SMC3-202ENST00000462899 FAM174AQ8TBP5 190 aa8□□□□□ -1.13
SMC3-202ENST00000462899 PTPRN2Q92932 1015 aa8□□□□□ -1.13
SMC3-202ENST00000462899 TMA16Q96EY4 203 aaKnown RBP8□□□□□ -1.13
SMC3-202ENST00000462899 MYEOVQ96EZ4 313 aa8□□□□□ -1.13
SMC3-202ENST00000462899 SLC46A1Q96NT5 459 aa8□□□□□ -1.13
SMC3-202ENST00000462899 NT5C1AQ9BXI3 368 aa8□□□□□ -1.13
SMC3-202ENST00000462899 GPR27Q9NS67 375 aa8□□□□□ -1.13
SMC3-202ENST00000462899 UCKL1Q9NWZ5 548 aa8□□□□□ -1.13
SMC3-202ENST00000462899 ANKMY1Q9P2S6 941 aa8□□□□□ -1.13
SMC3-202ENST00000462899 TFIP11Q9UBB9 837 aaKnown RBP8□□□□□ -1.13
SMC3-202ENST00000462899 CYTH4Q9UIA0 394 aa8□□□□□ -1.13
SMC3-202ENST00000462899 STRIP2Q9ULQ0 834 aa8□□□□□ -1.13
SMC3-202ENST00000462899 SATB2Q9UPW6 733 aa8□□□□□ -1.13
SMC3-202ENST00000462899 PCDHGA8Q9Y5G5 932 aa8□□□□□ -1.13
SMC3-202ENST00000462899 CELSR2Q9HCU4 2923 aa8□□□□□ -1.13
SMC3-202ENST00000462899 TTC34A8MYJ7 566 aa7.99□□□□□ -1.13
SMC3-202ENST00000462899 PLRG1O43660 514 aaKnown RBP7.99□□□□□ -1.13
SMC3-202ENST00000462899 EIF5BO60841 1220 aaKnown RBP7.99□□□□□ -1.13
SMC3-202ENST00000462899 HLA-DRAP01903 254 aa7.99□□□□□ -1.13
SMC3-202ENST00000462899 ASLP04424 464 aa7.99□□□□□ -1.13
SMC3-202ENST00000462899 SLFN14P0C7P3 912 aa7.99□□□□□ -1.13
SMC3-202ENST00000462899 POLR2EP19388 210 aaKnown RBP7.99□□□□□ -1.13
SMC3-202ENST00000462899 C5AR1P21730 350 aa7.99□□□□□ -1.13
SMC3-202ENST00000462899 MZF1P28698 734 aaPredicted RBP7.99□□□□□ -1.13
SMC3-202ENST00000462899 NUDT1P36639 197 aa7.99□□□□□ -1.13
SMC3-202ENST00000462899 CSKP41240 450 aa7.99□□□□□ -1.13
SMC3-202ENST00000462899 CTSOP43234 321 aaPredicted RBP7.99□□□□□ -1.13
SMC3-202ENST00000462899 HARS2P49590 506 aaKnown RBP7.99□□□□□ -1.13
SMC3-202ENST00000462899 PDX1P52945 283 aa7.99□□□□□ -1.13
SMC3-202ENST00000462899 MCCD1P59942 119 aaPredicted RBP7.99□□□□□ -1.13
SMC3-202ENST00000462899 NFATC3Q12968 1075 aa7.99□□□□□ -1.13
SMC3-202ENST00000462899 ISXQ2M1V0 245 aa7.99□□□□□ -1.13
SMC3-202ENST00000462899 LRRK1Q38SD2 2015 aa7.99□□□□□ -1.13
SMC3-202ENST00000462899 SLC45A4Q5BKX6 768 aa7.99□□□□□ -1.13
SMC3-202ENST00000462899 NADSYN1Q6IA69 706 aa7.99□□□□□ -1.13
SMC3-202ENST00000462899 MSANTD2Q6P1R3 559 aa7.99□□□□□ -1.13
SMC3-202ENST00000462899 UNC13DQ70J99 1090 aa7.99□□□□□ -1.13
SMC3-202ENST00000462899 PIGZQ86VD9 579 aa7.99□□□□□ -1.13
SMC3-202ENST00000462899 SLC9A9Q8IVB4 645 aa7.99□□□□□ -1.13
SMC3-202ENST00000462899 APOLD1Q96LR9 279 aa7.99□□□□□ -1.13
SMC3-202ENST00000462899 OMDQ99983 421 aa7.99□□□□□ -1.13
SMC3-202ENST00000462899 C7orf25Q9BPX7 421 aa7.99□□□□□ -1.13
Retrieved 100 of 20,778 RNA–protein pairs in 21.7 ms