RNA–Protein interactions for RNA: ENST00000462236.1

COPS3-204, Transcript of COP9 signalosome subunit 3, humanhuman

TSL 5

Gene COPS3, Length 551 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COPS3-204ENST00000462236 CEP72Q9P209 647 aa5.45□□□□□ -1.54
COPS3-204ENST00000462236 COL20A1Q9P218 1284 aa5.45□□□□□ -1.54
COPS3-204ENST00000462236 ZZEF1O43149 2961 aa5.45□□□□□ -1.54
COPS3-204ENST00000462236 NOTCH4Q99466 2003 aa5.45□□□□□ -1.54
COPS3-204ENST00000462236 HELZ2Q9BYK8 2649 aaKnown RBP5.44□□□□□ -1.54
COPS3-204ENST00000462236 PI4KAP42356 2102 aa5.44□□□□□ -1.54
COPS3-204ENST00000462236 FRYQ5TBA9 3013 aa5.44□□□□□ -1.54
COPS3-204ENST00000462236 MBD3L4A6NDZ8 208 aaPredicted RBP5.44□□□□□ -1.54
COPS3-204ENST00000462236 MBD3L3A6NE82 208 aaPredicted RBP5.44□□□□□ -1.54
COPS3-204ENST00000462236 ZNF185O15231 689 aa5.44□□□□□ -1.54
COPS3-204ENST00000462236 GPAA1O43292 621 aa5.44□□□□□ -1.54
COPS3-204ENST00000462236 ERN1O75460 977 aaKnown RBP5.44□□□□□ -1.54
COPS3-204ENST00000462236 UNC5CO95185 931 aa5.44□□□□□ -1.54
COPS3-204ENST00000462236 ZNF286BP0CG31 522 aa5.44□□□□□ -1.54
COPS3-204ENST00000462236 TSPY3P0CV98 308 aa5.44□□□□□ -1.54
COPS3-204ENST00000462236 TSPY8P0CW00 308 aa5.44□□□□□ -1.54
COPS3-204ENST00000462236 SNHG28P0DPA3 235 aa5.44□□□□□ -1.54
COPS3-204ENST00000462236 ARP10275 920 aa5.44□□□□□ -1.54
COPS3-204ENST00000462236 KCNA2P16389 499 aa5.44□□□□□ -1.54
COPS3-204ENST00000462236 CALML3P27482 149 aa5.44□□□□□ -1.54
COPS3-204ENST00000462236 NDUFV1P49821 464 aa5.44□□□□□ -1.54
COPS3-204ENST00000462236 CASP5P51878 434 aa5.44□□□□□ -1.54
COPS3-204ENST00000462236 TFAP4Q01664 338 aa5.44□□□□□ -1.54
COPS3-204ENST00000462236 GHRHRQ02643 423 aa5.44□□□□□ -1.54
COPS3-204ENST00000462236 BTKQ06187 659 aa5.44□□□□□ -1.54
COPS3-204ENST00000462236 ACACAQ13085 2346 aa5.44□□□□□ -1.54
COPS3-204ENST00000462236 HLXQ14774 488 aaPredicted RBP5.44□□□□□ -1.54
COPS3-204ENST00000462236 USP39Q53GS9 565 aaKnown RBP5.44□□□□□ -1.54
COPS3-204ENST00000462236 ZKSCAN2Q63HK3 967 aa5.44□□□□□ -1.54
COPS3-204ENST00000462236 ZSCAN25Q6NSZ9 544 aa5.44□□□□□ -1.54
COPS3-204ENST00000462236 TMPRSS9Q7Z410 1059 aa5.44□□□□□ -1.54
COPS3-204ENST00000462236 CLNKQ7Z7G1 428 aa5.44□□□□□ -1.54
COPS3-204ENST00000462236 ADSSL1Q8N142 457 aa5.44□□□□□ -1.54
COPS3-204ENST00000462236 CELF5Q8N6W0 485 aaKnown RBP5.44□□□□□ -1.54
COPS3-204ENST00000462236 SEPT8Q92599 483 aa5.44□□□□□ -1.54
COPS3-204ENST00000462236 TBC1D5Q92609 795 aa5.44□□□□□ -1.54
COPS3-204ENST00000462236 APBB2Q92870 758 aa5.44□□□□□ -1.54
COPS3-204ENST00000462236 MYEOVQ96EZ4 313 aa5.44□□□□□ -1.54
COPS3-204ENST00000462236 TRIB1Q96RU8 372 aa5.44□□□□□ -1.54
COPS3-204ENST00000462236 IWS1Q96ST2 819 aa5.44□□□□□ -1.54
COPS3-204ENST00000462236 TLR10Q9BXR5 811 aa5.44□□□□□ -1.54
COPS3-204ENST00000462236 KRTAP4-2Q9BYR5 136 aa5.44□□□□□ -1.54
COPS3-204ENST00000462236 IFIH1Q9BYX4 1025 aaKnown RBP5.44□□□□□ -1.54
COPS3-204ENST00000462236 PNPLA8Q9NP80 782 aa5.44□□□□□ -1.54
COPS3-204ENST00000462236 AKIP1Q9NQ31 210 aa5.44□□□□□ -1.54
COPS3-204ENST00000462236 SERHLQ9NQF3 203 aa5.44□□□□□ -1.54
COPS3-204ENST00000462236 ETAA1Q9NY74 926 aa5.44□□□□□ -1.54
COPS3-204ENST00000462236 DLL3Q9NYJ7 618 aa5.44□□□□□ -1.54
COPS3-204ENST00000462236 CPNE7Q9UBL6 633 aa5.44□□□□□ -1.54
COPS3-204ENST00000462236 BARX2Q9UMQ3 279 aaPredicted RBP5.44□□□□□ -1.54
COPS3-204ENST00000462236 SNX13Q9Y5W8 968 aa5.44□□□□□ -1.54
COPS3-204ENST00000462236 ASXL3Q9C0F0 2248 aa5.44□□□□□ -1.54
COPS3-204ENST00000462236 SMG1Q96Q15 3661 aaKnown RBP5.43□□□□□ -1.54
COPS3-204ENST00000462236 M0QYG6 137 aa5.43□□□□□ -1.54
COPS3-204ENST00000462236 NMT2O60551 498 aa5.43□□□□□ -1.54
COPS3-204ENST00000462236 IL18RAPO95256 599 aa5.43□□□□□ -1.54
COPS3-204ENST00000462236 ATXN1LP0C7T5 689 aaKnown RBP5.43□□□□□ -1.54
COPS3-204ENST00000462236 KLRC1P26715 233 aa5.43□□□□□ -1.54
COPS3-204ENST00000462236 SLC16A2P36021 539 aa5.43□□□□□ -1.54
COPS3-204ENST00000462236 THPOP40225 353 aa5.43□□□□□ -1.54
COPS3-204ENST00000462236 PIK3CBP42338 1070 aa5.43□□□□□ -1.54
COPS3-204ENST00000462236 SLC11A2P49281 568 aa5.43□□□□□ -1.54
COPS3-204ENST00000462236 ANXA11P50995 505 aaKnown RBP5.43□□□□□ -1.54
COPS3-204ENST00000462236 CLCN5P51795 746 aa5.43□□□□□ -1.54
COPS3-204ENST00000462236 NEK3P51956 506 aa5.43□□□□□ -1.54
COPS3-204ENST00000462236 PTTG1IPP53801 180 aa5.43□□□□□ -1.54
COPS3-204ENST00000462236 SATB1Q01826 763 aa5.43□□□□□ -1.54
COPS3-204ENST00000462236 MGAT3Q09327 533 aa5.43□□□□□ -1.54
COPS3-204ENST00000462236 IKQ13123 557 aaPredicted RBP5.43□□□□□ -1.54
COPS3-204ENST00000462236 CTBP1Q13363 440 aa5.43□□□□□ -1.54
COPS3-204ENST00000462236 DAG1Q14118 895 aa5.43□□□□□ -1.54
COPS3-204ENST00000462236 MORC3Q14149 939 aa5.43□□□□□ -1.54
COPS3-204ENST00000462236 BEAN1Q3B7T3 259 aa5.43□□□□□ -1.54
COPS3-204ENST00000462236 HSDL1Q3SXM5 330 aa5.43□□□□□ -1.54
COPS3-204ENST00000462236 SPDYAQ5MJ70 313 aa5.43□□□□□ -1.54
COPS3-204ENST00000462236 SYCP2LQ5T4T6 812 aa5.43□□□□□ -1.54
COPS3-204ENST00000462236 SP5Q6BEB4 398 aaPredicted RBP5.43□□□□□ -1.54
COPS3-204ENST00000462236 SYCE2Q6PIF2 218 aa5.43□□□□□ -1.54
COPS3-204ENST00000462236 MICU3Q86XE3 530 aa5.43□□□□□ -1.54
COPS3-204ENST00000462236 SDR16C5Q8N3Y7 309 aa5.43□□□□□ -1.54
COPS3-204ENST00000462236 Q8NA96 180 aa5.43□□□□□ -1.54
COPS3-204ENST00000462236 KBTBD3Q8NAB2 608 aa5.43□□□□□ -1.54
COPS3-204ENST00000462236 SLC25A43Q8WUT9 341 aaPredicted RBP5.43□□□□□ -1.54
COPS3-204ENST00000462236 IPCEF1Q8WWN9 437 aaPredicted RBP5.43□□□□□ -1.54
COPS3-204ENST00000462236 FRAT1Q92837 279 aaPredicted RBP5.43□□□□□ -1.54
COPS3-204ENST00000462236 EXTL1Q92935 676 aa5.43□□□□□ -1.54
COPS3-204ENST00000462236 LENG9Q96B70 501 aa5.43□□□□□ -1.54
COPS3-204ENST00000462236 TAAR1Q96RJ0 339 aa5.43□□□□□ -1.54
COPS3-204ENST00000462236 GALNT9Q9HCQ5 603 aa5.43□□□□□ -1.54
COPS3-204ENST00000462236 NLRC4Q9NPP4 1024 aa5.43□□□□□ -1.54
COPS3-204ENST00000462236 CHST12Q9NRB3 414 aa5.43□□□□□ -1.54
COPS3-204ENST00000462236 TCP11L1Q9NUJ3 509 aa5.43□□□□□ -1.54
COPS3-204ENST00000462236 CTTNBP2NLQ9P2B4 639 aa5.43□□□□□ -1.54
COPS3-204ENST00000462236 HSFX1Q9UBD0 423 aa5.43□□□□□ -1.54
COPS3-204ENST00000462236 XPR1Q9UBH6 696 aa5.43□□□□□ -1.54
COPS3-204ENST00000462236 HESX1Q9UBX0 185 aa5.43□□□□□ -1.54
COPS3-204ENST00000462236 ANAPC4Q9UJX5 808 aa5.43□□□□□ -1.54
COPS3-204ENST00000462236 PNMA2Q9UL42 364 aa5.43□□□□□ -1.54
COPS3-204ENST00000462236 AGAP1Q9UPQ3 857 aa5.43□□□□□ -1.54
COPS3-204ENST00000462236 CDYLQ9Y232 598 aa5.43□□□□□ -1.54
Retrieved 100 of 20,778 RNA–protein pairs in 27.9 ms