RNA–Protein interactions for RNA: ENST00000462125.5

C9orf3-210, Transcript of chromosome 9 open reading frame 3, humanhuman

TSL 3

Gene C9orf3, Length 961 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
C9orf3-210ENST00000462125 RPRD1AQ96P16 312 aaPredicted RBP13.62□□□□□ -0.23
C9orf3-210ENST00000462125 SPAG5Q96R06 1193 aa13.62□□□□□ -0.23
C9orf3-210ENST00000462125 FAM129BQ96TA1 746 aa13.62□□□□□ -0.23
C9orf3-210ENST00000462125 TBCBQ99426 244 aa13.62□□□□□ -0.23
C9orf3-210ENST00000462125 BPIFA3Q9BQP9 254 aa13.62□□□□□ -0.23
C9orf3-210ENST00000462125 FEM1AQ9BSK4 669 aa13.62□□□□□ -0.23
C9orf3-210ENST00000462125 VANGL2Q9ULK5 521 aa13.62□□□□□ -0.23
C9orf3-210ENST00000462125 PAXBP1Q9Y5B6 917 aa13.62□□□□□ -0.23
C9orf3-210ENST00000462125 OR51B4Q9Y5P0 310 aa13.62□□□□□ -0.23
C9orf3-210ENST00000462125 MUC22E2RYF6 1773 aaPredicted RBP13.62□□□□□ -0.23
C9orf3-210ENST00000462125 CEP192Q8TEP8 1941 aa13.62□□□□□ -0.23
C9orf3-210ENST00000462125 PI4KAP42356 2102 aa13.61□□□□□ -0.23
C9orf3-210ENST00000462125 ZNF559-ZNF177A0A0A6YYI6 481 aaPredicted RBP13.61□□□□□ -0.23
C9orf3-210ENST00000462125 A0A1B0GTW7 788 aa13.61□□□□□ -0.23
C9orf3-210ENST00000462125 TTC34A8MYJ7 566 aa13.61□□□□□ -0.23
C9orf3-210ENST00000462125 UPK3BL1B0FP48 263 aa13.61□□□□□ -0.23
C9orf3-210ENST00000462125 UPK3BL2E5RIL1 263 aa13.61□□□□□ -0.23
C9orf3-210ENST00000462125 SIN3BO75182 1162 aa13.61□□□□□ -0.23
C9orf3-210ENST00000462125 CLDN11O75508 207 aa13.61□□□□□ -0.23
C9orf3-210ENST00000462125 SYPP08247 313 aa13.61□□□□□ -0.23
C9orf3-210ENST00000462125 PDGFRAP16234 1089 aa13.61□□□□□ -0.23
C9orf3-210ENST00000462125 SULT1E1P49888 294 aa13.61□□□□□ -0.23
C9orf3-210ENST00000462125 CDH4P55283 916 aa13.61□□□□□ -0.23
C9orf3-210ENST00000462125 PTP4A2Q12974 167 aa13.61□□□□□ -0.23
C9orf3-210ENST00000462125 SEMA3BQ13214 749 aa13.61□□□□□ -0.23
C9orf3-210ENST00000462125 ZNF177Q13360 481 aaPredicted RBP13.61□□□□□ -0.23
C9orf3-210ENST00000462125 N4BP2L1Q5TBK1 243 aaPredicted RBP13.61□□□□□ -0.23
C9orf3-210ENST00000462125 DCAF12L1Q5VU92 463 aa13.61□□□□□ -0.23
C9orf3-210ENST00000462125 ZNF776Q68DI1 518 aaPredicted RBP13.61□□□□□ -0.23
C9orf3-210ENST00000462125 USP30Q70CQ3 517 aa13.61□□□□□ -0.23
C9orf3-210ENST00000462125 SND1Q7KZF4 910 aaKnown RBP eCLIP13.61□□□□□ -0.23
C9orf3-210ENST00000462125 CIR1Q86X95 450 aaPredicted RBP13.61□□□□□ -0.23
C9orf3-210ENST00000462125 NEK11Q8NG66 645 aa13.61□□□□□ -0.23
C9orf3-210ENST00000462125 OR52K2Q8NGK3 314 aa13.61□□□□□ -0.23
C9orf3-210ENST00000462125 PTPRN2Q92932 1015 aa13.61□□□□□ -0.23
C9orf3-210ENST00000462125 RPL10LQ96L21 214 aaKnown RBP13.61□□□□□ -0.23
C9orf3-210ENST00000462125 HAPLN3Q96S86 360 aa13.61□□□□□ -0.23
C9orf3-210ENST00000462125 PCDHB18PQ96TA0 734 aa13.61□□□□□ -0.23
C9orf3-210ENST00000462125 NAT10Q9H0A0 1025 aaKnown RBP13.61□□□□□ -0.23
C9orf3-210ENST00000462125 BTBD1Q9H0C5 482 aa13.61□□□□□ -0.23
C9orf3-210ENST00000462125 SIK2Q9H0K1 926 aa13.61□□□□□ -0.23
C9orf3-210ENST00000462125 SGK2Q9HBY8 427 aa13.61□□□□□ -0.23
C9orf3-210ENST00000462125 SPTBN2O15020 2390 aa13.6□□□□□ -0.23
C9orf3-210ENST00000462125 IGLV3-10A0A075B6K4 115 aa13.6□□□□□ -0.23
C9orf3-210ENST00000462125 EDDM13A0A1B0GTR0 161 aa13.6□□□□□ -0.23
C9orf3-210ENST00000462125 C10orf142B7Z368 130 aa13.6□□□□□ -0.23
C9orf3-210ENST00000462125 ATP1A3P13637 1013 aa13.6□□□□□ -0.23
C9orf3-210ENST00000462125 CEACAM1P13688 526 aa13.6□□□□□ -0.23
C9orf3-210ENST00000462125 NNMTP40261 264 aa13.6□□□□□ -0.23
C9orf3-210ENST00000462125 IRAK1P51617 712 aa13.6□□□□□ -0.23
C9orf3-210ENST00000462125 CENPCQ03188 943 aa13.6□□□□□ -0.23
C9orf3-210ENST00000462125 SFSWAPQ12872 951 aaKnown RBP13.6□□□□□ -0.23
C9orf3-210ENST00000462125 LRSAM1Q6UWE0 723 aa13.6□□□□□ -0.23
C9orf3-210ENST00000462125 FAM124AQ86V42 546 aa13.6□□□□□ -0.23
C9orf3-210ENST00000462125 CACUL1Q86Y37 369 aa13.6□□□□□ -0.23
C9orf3-210ENST00000462125 DHX40Q8IX18 779 aaKnown RBP13.6□□□□□ -0.23
C9orf3-210ENST00000462125 FRS2Q8WU20 508 aa13.6□□□□□ -0.23
C9orf3-210ENST00000462125 ZDHHC5Q9C0B5 715 aa13.6□□□□□ -0.23
C9orf3-210ENST00000462125 PABPC3Q9H361 631 aaKnown RBP13.6□□□□□ -0.23
C9orf3-210ENST00000462125 GRPEL1Q9HAV7 217 aa13.6□□□□□ -0.23
C9orf3-210ENST00000462125 OSGEPQ9NPF4 335 aa13.6□□□□□ -0.23
C9orf3-210ENST00000462125 FSCN3Q9NQT6 498 aa13.6□□□□□ -0.23
C9orf3-210ENST00000462125 DNAAF2Q9NVR5 837 aaKnown RBP13.6□□□□□ -0.23
C9orf3-210ENST00000462125 CNOT1A5YKK6 2376 aaKnown RBP13.6□□□□□ -0.23
C9orf3-210ENST00000462125 MEI4A8MW99 385 aa13.59□□□□□ -0.23
C9orf3-210ENST00000462125 GOLGA8SH3BPF8 625 aa13.59□□□□□ -0.23
C9orf3-210ENST00000462125 BCAT2O15382 392 aaPredicted RBP13.59□□□□□ -0.23
C9orf3-210ENST00000462125 ATP9BO43861 1147 aa13.59□□□□□ -0.23
C9orf3-210ENST00000462125 RNASEH1O60930 286 aaKnown RBP13.59□□□□□ -0.23
C9orf3-210ENST00000462125 GJB3O75712 270 aa13.59□□□□□ -0.23
C9orf3-210ENST00000462125 CNTN5O94779 1100 aa13.59□□□□□ -0.23
C9orf3-210ENST00000462125 SEMA4FO95754 770 aa13.59□□□□□ -0.23
C9orf3-210ENST00000462125 PMLP29590 882 aa13.59□□□□□ -0.23
C9orf3-210ENST00000462125 RDXP35241 583 aaKnown RBP13.59□□□□□ -0.23
C9orf3-210ENST00000462125 GGCXP38435 758 aa13.59□□□□□ -0.23
C9orf3-210ENST00000462125 MAPK8P45983 427 aa13.59□□□□□ -0.23
C9orf3-210ENST00000462125 STK19P49842 368 aaPredicted RBP13.59□□□□□ -0.23
C9orf3-210ENST00000462125 ATXN3P54252 364 aaPredicted RBP13.59□□□□□ -0.23
C9orf3-210ENST00000462125 GSCP56915 257 aaPredicted RBP13.59□□□□□ -0.23
C9orf3-210ENST00000462125 SLC14A1Q13336 389 aa13.59□□□□□ -0.23
C9orf3-210ENST00000462125 CST6Q15828 149 aa13.59□□□□□ -0.23
C9orf3-210ENST00000462125 TTC31Q49AM3 519 aaPredicted RBP13.59□□□□□ -0.23
C9orf3-210ENST00000462125 ANO6Q4KMQ2 910 aa13.59□□□□□ -0.23
C9orf3-210ENST00000462125 ALFQ53S48 1182 aa13.59□□□□□ -0.23
C9orf3-210ENST00000462125 RNF219Q5W0B1 726 aaPredicted RBP13.59□□□□□ -0.23
C9orf3-210ENST00000462125 PSAPL1Q6NUJ1 521 aa13.59□□□□□ -0.23
C9orf3-210ENST00000462125 PIP4P1Q86T03 277 aa13.59□□□□□ -0.23
C9orf3-210ENST00000462125 SETD3Q86TU7 594 aaPredicted RBP13.59□□□□□ -0.23
C9orf3-210ENST00000462125 PHF13Q86YI8 300 aaPredicted RBP13.59□□□□□ -0.23
C9orf3-210ENST00000462125 MINDY1Q8N5J2 469 aa13.59□□□□□ -0.23
C9orf3-210ENST00000462125 AOPEPQ8N6M6 819 aa13.59□□□□□ -0.23
C9orf3-210ENST00000462125 SLC30A5Q8TAD4 765 aa13.59□□□□□ -0.23
C9orf3-210ENST00000462125 ANP32BQ92688 251 aaKnown RBP13.59□□□□□ -0.23
C9orf3-210ENST00000462125 PCMTD1Q96MG8 357 aaPredicted RBP13.59□□□□□ -0.23
C9orf3-210ENST00000462125 CFAP57Q96MR6 1250 aa13.59□□□□□ -0.23
C9orf3-210ENST00000462125 C6orf106Q9H6K1 298 aaPredicted RBP13.59□□□□□ -0.23
C9orf3-210ENST00000462125 RTN4Q9NQC3 1192 aaKnown RBP13.59□□□□□ -0.23
C9orf3-210ENST00000462125 FBXL12Q9NXK8 326 aa13.59□□□□□ -0.23
C9orf3-210ENST00000462125 ADAMTS1Q9UHI8 967 aa13.59□□□□□ -0.23
C9orf3-210ENST00000462125 EIF2B4Q9UI10 523 aaKnown RBP13.59□□□□□ -0.23
Retrieved 100 of 20,778 RNA–protein pairs in 39.4 ms