RNA–Protein interactions for RNA: ENST00000461550.5

MRPL28-207, Transcript of mitochondrial ribosomal protein L28, humanhuman

TSL 5

Gene MRPL28, Length 1,478 nt, Biotype retained intron, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MRPL28-207ENST00000461550 ZNF776Q68DI1 518 aaPredicted RBP17.97■□□□□ 0.47
MRPL28-207ENST00000461550 SND1Q7KZF4 910 aaKnown RBP eCLIP17.97■□□□□ 0.47
MRPL28-207ENST00000461550 CEP76Q8TAP6 659 aa17.97■□□□□ 0.47
MRPL28-207ENST00000461550 PCDHB18PQ96TA0 734 aa17.97■□□□□ 0.47
MRPL28-207ENST00000461550 CAPN10Q9HC96 672 aa17.97■□□□□ 0.47
MRPL28-207ENST00000461550 ARHGEF38Q9NXL2 777 aa17.97■□□□□ 0.47
MRPL28-207ENST00000461550 CHD8Q9HCK8 2581 aa17.97■□□□□ 0.47
MRPL28-207ENST00000461550 LRRC10BA6NIK2 292 aa17.96■□□□□ 0.47
MRPL28-207ENST00000461550 GIPC1O14908 333 aa17.96■□□□□ 0.47
MRPL28-207ENST00000461550 CNTN5O94779 1100 aa17.96■□□□□ 0.47
MRPL28-207ENST00000461550 DNTTP04053 509 aa17.96■□□□□ 0.47
MRPL28-207ENST00000461550 SRPRAP08240 638 aaKnown RBP17.96■□□□□ 0.47
MRPL28-207ENST00000461550 VAV1P15498 845 aa17.96■□□□□ 0.47
MRPL28-207ENST00000461550 MMP8P22894 467 aa17.96■□□□□ 0.47
MRPL28-207ENST00000461550 ATP11AP98196 1134 aa17.96■□□□□ 0.47
MRPL28-207ENST00000461550 RAB6CQ53S08 254 aa17.96■□□□□ 0.47
MRPL28-207ENST00000461550 WDR45BQ5MNZ6 344 aa17.96■□□□□ 0.47
MRPL28-207ENST00000461550 BRMS1LQ5PSV4 323 aa17.96■□□□□ 0.47
MRPL28-207ENST00000461550 C9orf64Q5T6V5 341 aa17.96■□□□□ 0.47
MRPL28-207ENST00000461550 PSAPL1Q6NUJ1 521 aa17.96■□□□□ 0.47
MRPL28-207ENST00000461550 ZCCHC9Q8N567 271 aaKnown RBP17.96■□□□□ 0.47
MRPL28-207ENST00000461550 RNF214Q8ND24 703 aa17.96■□□□□ 0.47
MRPL28-207ENST00000461550 SNX19Q92543 992 aa17.96■□□□□ 0.47
MRPL28-207ENST00000461550 PGAP3Q96FM1 320 aaPredicted RBP17.96■□□□□ 0.47
MRPL28-207ENST00000461550 ERGIC2Q96RQ1 377 aa17.96■□□□□ 0.47
MRPL28-207ENST00000461550 RAB6CQ9H0N0 254 aa17.96■□□□□ 0.47
MRPL28-207ENST00000461550 RSPH9Q9H1X1 276 aaPredicted RBP17.96■□□□□ 0.47
MRPL28-207ENST00000461550 C6orf106Q9H6K1 298 aaPredicted RBP17.96■□□□□ 0.47
MRPL28-207ENST00000461550 FBRSQ9HAH7 460 aa17.96■□□□□ 0.47
MRPL28-207ENST00000461550 TPRP12270 2363 aaKnown RBP17.96■□□□□ 0.47
MRPL28-207ENST00000461550 ZNF559-ZNF177A0A0A6YYI6 481 aaPredicted RBP17.95■□□□□ 0.46
MRPL28-207ENST00000461550 GOLGA6L19H0YKK7 550 aa17.95■□□□□ 0.46
MRPL28-207ENST00000461550 TEX33O43247 280 aa17.95■□□□□ 0.46
MRPL28-207ENST00000461550 ADRB1P08588 477 aa17.95■□□□□ 0.46
MRPL28-207ENST00000461550 ATXN3P54252 364 aaPredicted RBP17.95■□□□□ 0.46
MRPL28-207ENST00000461550 ZNF177Q13360 481 aaPredicted RBP17.95■□□□□ 0.46
MRPL28-207ENST00000461550 ALFQ53S48 1182 aa17.95■□□□□ 0.46
MRPL28-207ENST00000461550 FAM131BQ86XD5 332 aa17.95■□□□□ 0.46
MRPL28-207ENST00000461550 MMAAQ8IVH4 418 aaKnown RBP17.95■□□□□ 0.46
MRPL28-207ENST00000461550 CADM4Q8NFZ8 388 aa17.95■□□□□ 0.46
MRPL28-207ENST00000461550 GANCQ8TET4 914 aa17.95■□□□□ 0.46
MRPL28-207ENST00000461550 ALG14Q96F25 216 aa17.95■□□□□ 0.46
MRPL28-207ENST00000461550 SEPT11Q9NVA2 429 aaKnown RBP17.95■□□□□ 0.46
MRPL28-207ENST00000461550 SERGEFQ9UGK8 458 aa17.95■□□□□ 0.46
MRPL28-207ENST00000461550 EIF2B4Q9UI10 523 aaKnown RBP17.95■□□□□ 0.46
MRPL28-207ENST00000461550 DAAM1Q9Y4D1 1078 aa17.95■□□□□ 0.46
MRPL28-207ENST00000461550 SLCO1B1Q9Y6L6 691 aa17.95■□□□□ 0.46
MRPL28-207ENST00000461550 KNL1Q8NG31 2342 aa17.95■□□□□ 0.46
MRPL28-207ENST00000461550 DOCK4Q8N1I0 1966 aa17.95■□□□□ 0.46
MRPL28-207ENST00000461550 METTL12A8MUP2 240 aa17.95■□□□□ 0.46
MRPL28-207ENST00000461550 KCNK5O95279 499 aa17.95■□□□□ 0.46
MRPL28-207ENST00000461550 F9P00740 461 aa17.95■□□□□ 0.46
MRPL28-207ENST00000461550 NOVA1P51513 510 aaKnown RBP17.95■□□□□ 0.46
MRPL28-207ENST00000461550 TPM4P67936 248 aa17.95■□□□□ 0.46
MRPL28-207ENST00000461550 SLC12A1Q13621 1099 aa17.95■□□□□ 0.46
MRPL28-207ENST00000461550 CDO1Q16878 200 aa17.95■□□□□ 0.46
MRPL28-207ENST00000461550 C15orf59Q2T9L4 293 aaPredicted RBP17.95■□□□□ 0.46
MRPL28-207ENST00000461550 TTC31Q49AM3 519 aaPredicted RBP17.95■□□□□ 0.46
MRPL28-207ENST00000461550 N4BP2L1Q5TBK1 243 aaPredicted RBP17.95■□□□□ 0.46
MRPL28-207ENST00000461550 SH3PXD2AQ5TCZ1 1133 aa17.95■□□□□ 0.46
MRPL28-207ENST00000461550 RABEPKQ7Z6M1 372 aa17.95■□□□□ 0.46
MRPL28-207ENST00000461550 TFAP2DQ7Z6R9 452 aa17.95■□□□□ 0.46
MRPL28-207ENST00000461550 ZNF683Q8IZ20 524 aa17.95■□□□□ 0.46
MRPL28-207ENST00000461550 STK40Q8N2I9 435 aa17.95■□□□□ 0.46
MRPL28-207ENST00000461550 JOSD2Q8TAC2 188 aa17.95■□□□□ 0.46
MRPL28-207ENST00000461550 DNASE2BQ8WZ79 361 aa17.95■□□□□ 0.46
MRPL28-207ENST00000461550 FEM1AQ9BSK4 669 aa17.95■□□□□ 0.46
MRPL28-207ENST00000461550 MPP6Q9NZW5 540 aa17.95■□□□□ 0.46
MRPL28-207ENST00000461550 VPS28Q9UK41 221 aa17.95■□□□□ 0.46
MRPL28-207ENST00000461550 ITIH6Q6UXX5 1313 aa17.94■□□□□ 0.46
MRPL28-207ENST00000461550 EDDM13A0A1B0GTR0 161 aa17.94■□□□□ 0.46
MRPL28-207ENST00000461550 MID1O15344 667 aa17.94■□□□□ 0.46
MRPL28-207ENST00000461550 CLDN11O75508 207 aa17.94■□□□□ 0.46
MRPL28-207ENST00000461550 SEMA4FO95754 770 aa17.94■□□□□ 0.46
MRPL28-207ENST00000461550 UNGP13051 313 aaPredicted RBP17.94■□□□□ 0.46
MRPL28-207ENST00000461550 GNSP15586 552 aa17.94■□□□□ 0.46
MRPL28-207ENST00000461550 RDXP35241 583 aaKnown RBP17.94■□□□□ 0.46
MRPL28-207ENST00000461550 PSMD8P48556 350 aa17.94■□□□□ 0.46
MRPL28-207ENST00000461550 ZBTB16Q05516 673 aa17.94■□□□□ 0.46
MRPL28-207ENST00000461550 MTA1Q13330 715 aa17.94■□□□□ 0.46
MRPL28-207ENST00000461550 CST6Q15828 149 aa17.94■□□□□ 0.46
MRPL28-207ENST00000461550 CLEC16AQ2KHT3 1053 aa17.94■□□□□ 0.46
MRPL28-207ENST00000461550 TRIM72Q6ZMU5 477 aa17.94■□□□□ 0.46
MRPL28-207ENST00000461550 BNIPLQ7Z465 357 aa17.94■□□□□ 0.46
MRPL28-207ENST00000461550 MINDY1Q8N5J2 469 aa17.94■□□□□ 0.46
MRPL28-207ENST00000461550 KDM1BQ8NB78 822 aa17.94■□□□□ 0.46
MRPL28-207ENST00000461550 RXFP2Q8WXD0 754 aa17.94■□□□□ 0.46
MRPL28-207ENST00000461550 PTPRN2Q92932 1015 aa17.94■□□□□ 0.46
MRPL28-207ENST00000461550 FAM129BQ96TA1 746 aa17.94■□□□□ 0.46
MRPL28-207ENST00000461550 BTBD1Q9H0C5 482 aa17.94■□□□□ 0.46
MRPL28-207ENST00000461550 MUC3BQ9H195 1237 aa17.94■□□□□ 0.46
MRPL28-207ENST00000461550 PABPC3Q9H361 631 aaKnown RBP17.94■□□□□ 0.46
MRPL28-207ENST00000461550 FBXL12Q9NXK8 326 aa17.94■□□□□ 0.46
MRPL28-207ENST00000461550 SUSD2Q9UGT4 822 aa17.94■□□□□ 0.46
MRPL28-207ENST00000461550 CEP295Q9C0D2 2601 aa17.94■□□□□ 0.46
MRPL28-207ENST00000461550 ACACBO00763 2458 aa17.93■□□□□ 0.46
MRPL28-207ENST00000461550 A0A1W2PP55 124 aa17.93■□□□□ 0.46
MRPL28-207ENST00000461550 FAM47DPA6NHR8 397 aa17.93■□□□□ 0.46
MRPL28-207ENST00000461550 ARHGAP33O14559 1287 aa17.93■□□□□ 0.46
MRPL28-207ENST00000461550 RNASEH1O60930 286 aaKnown RBP17.93■□□□□ 0.46
Retrieved 100 of 20,778 RNA–protein pairs in 24.9 ms