RNA–Protein interactions for RNA: ENST00000460483.5

SMNDC1-203, Transcript of survival motor neuron domain containing 1, humanhuman

TSL 3

Gene SMNDC1, Length 753 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMNDC1-203ENST00000460483 BBS5Q8N3I7 341 aa11.32□□□□□ -0.6
SMNDC1-203ENST00000460483 SYNPOQ8N3V7 929 aa11.32□□□□□ -0.6
SMNDC1-203ENST00000460483 P3H4Q92791 437 aa11.32□□□□□ -0.6
SMNDC1-203ENST00000460483 RNF157Q96PX1 679 aa11.32□□□□□ -0.6
SMNDC1-203ENST00000460483 PEBP4Q96S96 227 aa11.32□□□□□ -0.6
SMNDC1-203ENST00000460483 KCTD15Q96SI1 283 aaPredicted RBP11.32□□□□□ -0.6
SMNDC1-203ENST00000460483 ADAM33Q9BZ11 813 aa11.32□□□□□ -0.6
SMNDC1-203ENST00000460483 HPS4Q9NQG7 708 aa11.32□□□□□ -0.6
SMNDC1-203ENST00000460483 ARHGEF4Q9NR80 690 aa11.32□□□□□ -0.6
SMNDC1-203ENST00000460483 ARHGEF3Q9NR81 526 aa11.32□□□□□ -0.6
SMNDC1-203ENST00000460483 GTSE1Q9NYZ3 720 aa11.32□□□□□ -0.6
SMNDC1-203ENST00000460483 CWC15Q9P013 229 aaKnown RBP11.32□□□□□ -0.6
SMNDC1-203ENST00000460483 XPO7Q9UIA9 1087 aaKnown RBP11.32□□□□□ -0.6
SMNDC1-203ENST00000460483 PLA2G4CQ9UP65 541 aa11.32□□□□□ -0.6
SMNDC1-203ENST00000460483 HYOU1Q9Y4L1 999 aa11.32□□□□□ -0.6
SMNDC1-203ENST00000460483 GOLGA6L10A0A0M3HER8 536 aa11.31□□□□□ -0.6
SMNDC1-203ENST00000460483 GFRA2O00451 464 aa11.31□□□□□ -0.6
SMNDC1-203ENST00000460483 SCAMP3O14828 347 aaKnown RBP11.31□□□□□ -0.6
SMNDC1-203ENST00000460483 PPP1R12AO14974 1030 aaPredicted RBP11.31□□□□□ -0.6
SMNDC1-203ENST00000460483 MTSS1O43312 755 aa11.31□□□□□ -0.6
SMNDC1-203ENST00000460483 DCXO43602 365 aa11.31□□□□□ -0.6
SMNDC1-203ENST00000460483 ATG13O75143 517 aa11.31□□□□□ -0.6
SMNDC1-203ENST00000460483 TULP3O75386 442 aa11.31□□□□□ -0.6
SMNDC1-203ENST00000460483 NEBLO76041 1014 aa11.31□□□□□ -0.6
SMNDC1-203ENST00000460483 ERCC2P18074 760 aa11.31□□□□□ -0.6
SMNDC1-203ENST00000460483 POLR2EP19388 210 aaKnown RBP11.31□□□□□ -0.6
SMNDC1-203ENST00000460483 HOXD9P28356 352 aaPredicted RBP11.31□□□□□ -0.6
SMNDC1-203ENST00000460483 CTHP32929 405 aa11.31□□□□□ -0.6
SMNDC1-203ENST00000460483 DEKP35659 375 aaKnown RBP11.31□□□□□ -0.6
SMNDC1-203ENST00000460483 PAFAH1B1P43034 410 aa11.31□□□□□ -0.6
SMNDC1-203ENST00000460483 TNFRSF4P43489 277 aa11.31□□□□□ -0.6
SMNDC1-203ENST00000460483 PEX5P50542 639 aa11.31□□□□□ -0.6
SMNDC1-203ENST00000460483 VCPP55072 806 aaKnown RBP11.31□□□□□ -0.6
SMNDC1-203ENST00000460483 ZNF33AQ06730 810 aa11.31□□□□□ -0.6
SMNDC1-203ENST00000460483 TNK2Q07912 1038 aa11.31□□□□□ -0.6
SMNDC1-203ENST00000460483 MLF2Q15773 248 aaPredicted RBP11.31□□□□□ -0.6
SMNDC1-203ENST00000460483 HSF5Q4G112 596 aaPredicted RBP11.31□□□□□ -0.6
SMNDC1-203ENST00000460483 DGKKQ5KSL6 1271 aa11.31□□□□□ -0.6
SMNDC1-203ENST00000460483 IL31Q6EBC2 164 aa11.31□□□□□ -0.6
SMNDC1-203ENST00000460483 TIGD7Q6NT04 549 aaPredicted RBP11.31□□□□□ -0.6
SMNDC1-203ENST00000460483 SPOCD1Q6ZMY3 1216 aa11.31□□□□□ -0.6
SMNDC1-203ENST00000460483 TFAP2DQ7Z6R9 452 aa11.31□□□□□ -0.6
SMNDC1-203ENST00000460483 SLC35F6Q8N357 371 aa11.31□□□□□ -0.6
SMNDC1-203ENST00000460483 CASKIN2Q8WXE0 1202 aa11.31□□□□□ -0.6
SMNDC1-203ENST00000460483 FAM3CQ92520 227 aa11.31□□□□□ -0.6
SMNDC1-203ENST00000460483 BHMTQ93088 406 aa11.31□□□□□ -0.6
SMNDC1-203ENST00000460483 WNT2BQ93097 391 aa11.31□□□□□ -0.6
SMNDC1-203ENST00000460483 IGSF8Q969P0 613 aa11.31□□□□□ -0.6
SMNDC1-203ENST00000460483 FAF2Q96CS3 445 aa11.31□□□□□ -0.6
SMNDC1-203ENST00000460483 CCDC114Q96M63 670 aa11.31□□□□□ -0.6
SMNDC1-203ENST00000460483 OSBPL8Q9BZF1 889 aa11.31□□□□□ -0.6
SMNDC1-203ENST00000460483 MFSD1Q9H3U5 465 aa11.31□□□□□ -0.6
SMNDC1-203ENST00000460483 GPATCH2LQ9NWQ4 482 aa11.31□□□□□ -0.6
SMNDC1-203ENST00000460483 FEZ2Q9UHY8 353 aaPredicted RBP11.31□□□□□ -0.6
SMNDC1-203ENST00000460483 SLC25A13Q9UJS0 675 aa11.31□□□□□ -0.6
SMNDC1-203ENST00000460483 VPS28Q9UK41 221 aa11.31□□□□□ -0.6
SMNDC1-203ENST00000460483 FBXO10Q9UK96 956 aa11.31□□□□□ -0.6
SMNDC1-203ENST00000460483 SAR1BQ9Y6B6 198 aa11.31□□□□□ -0.6
SMNDC1-203ENST00000460483 MYH10P35580 1976 aa11.3□□□□□ -0.6
SMNDC1-203ENST00000460483 TRDMT1O14717 391 aaKnown RBP11.3□□□□□ -0.6
SMNDC1-203ENST00000460483 STK10O94804 968 aaKnown RBP11.3□□□□□ -0.6
SMNDC1-203ENST00000460483 KAT7O95251 611 aa11.3□□□□□ -0.6
SMNDC1-203ENST00000460483 PABPC1P11940 636 aaKnown RBP11.3□□□□□ -0.6
SMNDC1-203ENST00000460483 CDKN2BP42772 138 aa11.3□□□□□ -0.6
SMNDC1-203ENST00000460483 MAGEA9P43362 315 aa11.3□□□□□ -0.6
SMNDC1-203ENST00000460483 ARSEP51690 589 aa11.3□□□□□ -0.6
SMNDC1-203ENST00000460483 PLK1P53350 603 aa11.3□□□□□ -0.6
SMNDC1-203ENST00000460483 GNA12Q03113 381 aa11.3□□□□□ -0.6
SMNDC1-203ENST00000460483 DPYSQ14117 519 aa11.3□□□□□ -0.6
SMNDC1-203ENST00000460483 PAFAH1B3Q15102 231 aaKnown RBP11.3□□□□□ -0.6
SMNDC1-203ENST00000460483 PDK1Q15118 436 aa11.3□□□□□ -0.6
SMNDC1-203ENST00000460483 CA9Q16790 459 aa11.3□□□□□ -0.6
SMNDC1-203ENST00000460483 DAB2IPQ5VWQ8 1189 aa11.3□□□□□ -0.6
SMNDC1-203ENST00000460483 RNF43Q68DV7 783 aa11.3□□□□□ -0.6
SMNDC1-203ENST00000460483 TPRG1Q6ZUI0 275 aa11.3□□□□□ -0.6
SMNDC1-203ENST00000460483 CYP4V2Q6ZWL3 525 aaPredicted RBP11.3□□□□□ -0.6
SMNDC1-203ENST00000460483 C14orf80Q86SX3 495 aa11.3□□□□□ -0.6
SMNDC1-203ENST00000460483 ETFBKMTQ8IXQ9 262 aa11.3□□□□□ -0.6
SMNDC1-203ENST00000460483 ZNF683Q8IZ20 524 aa11.3□□□□□ -0.6
SMNDC1-203ENST00000460483 PYROXD2Q8N2H3 581 aa11.3□□□□□ -0.6
SMNDC1-203ENST00000460483 DDX51Q8N8A6 666 aaKnown RBP eCLIP11.3□□□□□ -0.6
SMNDC1-203ENST00000460483 NAT16Q8N8M0 369 aa11.3□□□□□ -0.6
SMNDC1-203ENST00000460483 TERB1Q8NA31 727 aa11.3□□□□□ -0.6
SMNDC1-203ENST00000460483 DCAF4L2Q8NA75 395 aa11.3□□□□□ -0.6
SMNDC1-203ENST00000460483 KDM1BQ8NB78 822 aa11.3□□□□□ -0.6
SMNDC1-203ENST00000460483 KIF18AQ8NI77 898 aa11.3□□□□□ -0.6
SMNDC1-203ENST00000460483 RIN3Q8TB24 985 aa11.3□□□□□ -0.6
SMNDC1-203ENST00000460483 RAPGEF5Q92565 580 aa11.3□□□□□ -0.6
SMNDC1-203ENST00000460483 TSC1Q92574 1164 aa11.3□□□□□ -0.6
SMNDC1-203ENST00000460483 WBP2Q969T9 261 aa11.3□□□□□ -0.6
SMNDC1-203ENST00000460483 ASIC4Q96FT7 647 aa11.3□□□□□ -0.6
SMNDC1-203ENST00000460483 PRICKLE1Q96MT3 831 aaPredicted RBP11.3□□□□□ -0.6
SMNDC1-203ENST00000460483 IER2Q9BTL4 223 aa11.3□□□□□ -0.6
SMNDC1-203ENST00000460483 SPON2Q9BUD6 331 aa11.3□□□□□ -0.6
SMNDC1-203ENST00000460483 OSBPL6Q9BZF3 934 aa11.3□□□□□ -0.6
SMNDC1-203ENST00000460483 GOLPH3Q9H4A6 298 aa11.3□□□□□ -0.6
SMNDC1-203ENST00000460483 ATP13A1Q9HD20 1204 aa11.3□□□□□ -0.6
SMNDC1-203ENST00000460483 ANLNQ9NQW6 1124 aa11.3□□□□□ -0.6
SMNDC1-203ENST00000460483 HEBP1Q9NRV9 189 aa11.3□□□□□ -0.6
SMNDC1-203ENST00000460483 ABCB8Q9NUT2 735 aa11.3□□□□□ -0.6
Retrieved 100 of 20,778 RNA–protein pairs in 20.1 ms