RNA–Protein interactions for RNA: ENST00000459775.5

USP39-210, Transcript of ubiquitin specific peptidase 39, humanhuman

TSL 2

Gene USP39, Length 2,148 nt, Biotype processed transcript, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USP39-210ENST00000459775 ABCG4Q9H172 646 aa10.63□□□□□ -0.71
USP39-210ENST00000459775 ZDHHC7Q9NXF8 308 aa10.63□□□□□ -0.71
USP39-210ENST00000459775 CLDND1Q9NY35 253 aa10.63□□□□□ -0.71
USP39-210ENST00000459775 RRN3Q9NYV6 651 aa10.63□□□□□ -0.71
USP39-210ENST00000459775 LCMT1Q9UIC8 334 aa10.63□□□□□ -0.71
USP39-210ENST00000459775 VANGL2Q9ULK5 521 aa10.63□□□□□ -0.71
USP39-210ENST00000459775 GRXCR2A6NFK2 248 aa10.63□□□□□ -0.71
USP39-210ENST00000459775 XYLBO75191 536 aa10.63□□□□□ -0.71
USP39-210ENST00000459775 IGLV3-27P01718 113 aa10.63□□□□□ -0.71
USP39-210ENST00000459775 HNRNPA1P09651 372 aaKnown RBP eCLIP10.63□□□□□ -0.71
USP39-210ENST00000459775 DESP17661 470 aa10.63□□□□□ -0.71
USP39-210ENST00000459775 SP100P23497 879 aaPredicted RBP10.63□□□□□ -0.71
USP39-210ENST00000459775 SLC6A4P31645 630 aa10.63□□□□□ -0.71
USP39-210ENST00000459775 LTBRP36941 435 aa10.63□□□□□ -0.71
USP39-210ENST00000459775 SGSHP51688 502 aa10.63□□□□□ -0.71
USP39-210ENST00000459775 EPHA5P54756 1037 aa10.63□□□□□ -0.71
USP39-210ENST00000459775 NRLP54845 237 aa10.63□□□□□ -0.71
USP39-210ENST00000459775 KLF1Q13351 362 aaPredicted RBP10.63□□□□□ -0.71
USP39-210ENST00000459775 ADAM15Q13444 863 aa10.63□□□□□ -0.71
USP39-210ENST00000459775 TFDP3Q5H9I0 405 aa10.63□□□□□ -0.71
USP39-210ENST00000459775 MS4A13Q5J8X5 152 aa10.63□□□□□ -0.71
USP39-210ENST00000459775 PTCRAQ6ISU1 281 aaPredicted RBP10.63□□□□□ -0.71
USP39-210ENST00000459775 RWDD4Q6NW29 188 aaKnown RBP10.63□□□□□ -0.71
USP39-210ENST00000459775 TTC27Q6P3X3 843 aa10.63□□□□□ -0.71
USP39-210ENST00000459775 LRRC49Q8IUZ0 686 aa10.63□□□□□ -0.71
USP39-210ENST00000459775 EFHBQ8N7U6 833 aa10.63□□□□□ -0.71
USP39-210ENST00000459775 IGSF8Q969P0 613 aa10.63□□□□□ -0.71
USP39-210ENST00000459775 RBM41Q96IZ5 413 aaKnown RBP10.63□□□□□ -0.71
USP39-210ENST00000459775 RNF157Q96PX1 679 aa10.63□□□□□ -0.71
USP39-210ENST00000459775 SH3GL3Q99963 347 aa10.63□□□□□ -0.71
USP39-210ENST00000459775 NDFIP2Q9NV92 336 aa10.63□□□□□ -0.71
USP39-210ENST00000459775 MRPS23Q9Y3D9 190 aaKnown RBP10.63□□□□□ -0.71
USP39-210ENST00000459775 H0Y3Z8 333 aa10.62□□□□□ -0.71
USP39-210ENST00000459775 GREM1O60565 184 aa10.62□□□□□ -0.71
USP39-210ENST00000459775 TSPAN3O60637 253 aa10.62□□□□□ -0.71
USP39-210ENST00000459775 CNTN5O94779 1100 aa10.62□□□□□ -0.71
USP39-210ENST00000459775 CORO1AP31146 461 aaKnown RBP10.62□□□□□ -0.71
USP39-210ENST00000459775 HOXA9P31269 272 aa10.62□□□□□ -0.71
USP39-210ENST00000459775 PAFAH1B1P43034 410 aa10.62□□□□□ -0.71
USP39-210ENST00000459775 FOXK2Q01167 660 aa10.62□□□□□ -0.71
USP39-210ENST00000459775 GBE1Q04446 702 aa10.62□□□□□ -0.71
USP39-210ENST00000459775 SLC10A2Q12908 348 aaPredicted RBP10.62□□□□□ -0.71
USP39-210ENST00000459775 SEMA3BQ13214 749 aa10.62□□□□□ -0.71
USP39-210ENST00000459775 AUHQ13825 339 aaKnown RBP10.62□□□□□ -0.71
USP39-210ENST00000459775 PPP2R5DQ14738 602 aa10.62□□□□□ -0.71
USP39-210ENST00000459775 MYBPC3Q14896 1274 aa10.62□□□□□ -0.71
USP39-210ENST00000459775 SLMAPQ14BN4 828 aa10.62□□□□□ -0.71
USP39-210ENST00000459775 TAZQ16635 292 aa10.62□□□□□ -0.71
USP39-210ENST00000459775 MUM1Q2TAK8 710 aa10.62□□□□□ -0.71
USP39-210ENST00000459775 PLD5Q8N7P1 536 aa10.62□□□□□ -0.71
USP39-210ENST00000459775 NTAN1Q96AB6 310 aa10.62□□□□□ -0.71
USP39-210ENST00000459775 RSRC1Q96IZ7 334 aaKnown RBP10.62□□□□□ -0.71
USP39-210ENST00000459775 LRRC3BQ96PB8 259 aa10.62□□□□□ -0.71
USP39-210ENST00000459775 KRT12Q99456 494 aa10.62□□□□□ -0.71
USP39-210ENST00000459775 ARHGEF4Q9NR80 690 aa10.62□□□□□ -0.71
USP39-210ENST00000459775 OLA1Q9NTK5 396 aaKnown RBP10.62□□□□□ -0.71
USP39-210ENST00000459775 SLTMQ9NWH9 1034 aaKnown RBP eCLIP10.62□□□□□ -0.71
USP39-210ENST00000459775 CFAP97Q9P2B7 532 aa10.62□□□□□ -0.71
USP39-210ENST00000459775 RRP15Q9Y3B9 282 aaKnown RBP10.62□□□□□ -0.71
USP39-210ENST00000459775 HEY1Q9Y5J3 304 aa10.62□□□□□ -0.71
USP39-210ENST00000459775 SLC30A1Q9Y6M5 507 aa10.62□□□□□ -0.71
USP39-210ENST00000459775 NOTCH4Q99466 2003 aa10.62□□□□□ -0.71
USP39-210ENST00000459775 BDP1A6H8Y1 2624 aa10.62□□□□□ -0.71
USP39-210ENST00000459775 CTAGE15A4D2H0 777 aa10.61□□□□□ -0.71
USP39-210ENST00000459775 EEF2KO00418 725 aaKnown RBP10.61□□□□□ -0.71
USP39-210ENST00000459775 OLFM2O95897 454 aa10.61□□□□□ -0.71
USP39-210ENST00000459775 CTAGE8P0CG41 777 aa10.61□□□□□ -0.71
USP39-210ENST00000459775 EPHB2P29323 1055 aa10.61□□□□□ -0.71
USP39-210ENST00000459775 CDC25CP30307 473 aa10.61□□□□□ -0.71
USP39-210ENST00000459775 SCAPQ12770 1279 aa10.61□□□□□ -0.71
USP39-210ENST00000459775 ARL13BQ3SXY8 428 aa10.61□□□□□ -0.71
USP39-210ENST00000459775 ALFQ53S48 1182 aa10.61□□□□□ -0.71
USP39-210ENST00000459775 FAM133BQ5BKY9 247 aaKnown RBP10.61□□□□□ -0.71
USP39-210ENST00000459775 HHATQ5VTY9 493 aa10.61□□□□□ -0.71
USP39-210ENST00000459775 ANKRD54Q6NXT1 300 aa10.61□□□□□ -0.71
USP39-210ENST00000459775 RFX8Q6ZV50 586 aa10.61□□□□□ -0.71
USP39-210ENST00000459775 TFAP2DQ7Z6R9 452 aa10.61□□□□□ -0.71
USP39-210ENST00000459775 CTAGE6Q86UF2 777 aa10.61□□□□□ -0.71
USP39-210ENST00000459775 TRIM42Q8IWZ5 723 aa10.61□□□□□ -0.71
USP39-210ENST00000459775 CTAGE4Q8IX94 777 aa10.61□□□□□ -0.71
USP39-210ENST00000459775 FAM71BQ8TC56 605 aa10.61□□□□□ -0.71
USP39-210ENST00000459775 NELL1Q92832 810 aa10.61□□□□□ -0.71
USP39-210ENST00000459775 USP13Q92995 863 aaPredicted RBP10.61□□□□□ -0.71
USP39-210ENST00000459775 FAM167BQ9BTA0 163 aa10.61□□□□□ -0.71
USP39-210ENST00000459775 ADAM7Q9H2U9 754 aa10.61□□□□□ -0.71
USP39-210ENST00000459775 SFXN1Q9H9B4 322 aa10.61□□□□□ -0.71
USP39-210ENST00000459775 CD320Q9NPF0 282 aa10.61□□□□□ -0.71
USP39-210ENST00000459775 AGO1Q9UL18 857 aaKnown RBP10.61□□□□□ -0.71
USP39-210ENST00000459775 TTC7AQ9ULT0 858 aaPredicted RBP10.61□□□□□ -0.71
USP39-210ENST00000459775 NEU3Q9UQ49 428 aa10.61□□□□□ -0.71
USP39-210ENST00000459775 H3BQ06 376 aaPredicted RBP10.61□□□□□ -0.71
USP39-210ENST00000459775 CES2O00748 559 aa10.61□□□□□ -0.71
USP39-210ENST00000459775 SLU7O95391 586 aaKnown RBP10.61□□□□□ -0.71
USP39-210ENST00000459775 APOEP02649 317 aa10.61□□□□□ -0.71
USP39-210ENST00000459775 VIPR2P41587 438 aa10.61□□□□□ -0.71
USP39-210ENST00000459775 PPP3CCP48454 512 aa10.61□□□□□ -0.71
USP39-210ENST00000459775 TUBP50607 506 aa10.61□□□□□ -0.71
USP39-210ENST00000459775 MLLT6P55198 1093 aaPredicted RBP10.61□□□□□ -0.71
USP39-210ENST00000459775 TPI1P60174 286 aa10.61□□□□□ -0.71
USP39-210ENST00000459775 RPS24P62847 133 aaKnown RBP10.61□□□□□ -0.71
Retrieved 100 of 20,778 RNA–protein pairs in 47.3 ms