RNA–Protein interactions for RNA: ENST00000459727.5

HDAC3-202, Transcript of histone deacetylase 3, humanhuman

TSL 5

Gene HDAC3, Length 524 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HDAC3-202ENST00000459727 PTPN3P26045 913 aa9.04□□□□□ -0.96
HDAC3-202ENST00000459727 RAB27AP51159 221 aa9.04□□□□□ -0.96
HDAC3-202ENST00000459727 ALDH18A1P54886 795 aaKnown RBP9.04□□□□□ -0.96
HDAC3-202ENST00000459727 IRX1P78414 480 aaPredicted RBP9.04□□□□□ -0.96
HDAC3-202ENST00000459727 DSG1Q02413 1049 aa9.04□□□□□ -0.96
HDAC3-202ENST00000459727 MTA1Q13330 715 aa9.04□□□□□ -0.96
HDAC3-202ENST00000459727 THOC5Q13769 683 aaKnown RBP9.04□□□□□ -0.96
HDAC3-202ENST00000459727 HERC3Q15034 1050 aa9.04□□□□□ -0.96
HDAC3-202ENST00000459727 RAB6CQ53S08 254 aa9.04□□□□□ -0.96
HDAC3-202ENST00000459727 RAB41Q5JT25 222 aa9.04□□□□□ -0.96
HDAC3-202ENST00000459727 BRMS1LQ5PSV4 323 aa9.04□□□□□ -0.96
HDAC3-202ENST00000459727 SH2D4BQ5SQS7 431 aa9.04□□□□□ -0.96
HDAC3-202ENST00000459727 UBXN11Q5T124 520 aa9.04□□□□□ -0.96
HDAC3-202ENST00000459727 GJC2Q5T442 439 aaPredicted RBP9.04□□□□□ -0.96
HDAC3-202ENST00000459727 SYCP2LQ5T4T6 812 aa9.04□□□□□ -0.96
HDAC3-202ENST00000459727 ACBD5Q5T8D3 534 aaPredicted RBP9.04□□□□□ -0.96
HDAC3-202ENST00000459727 TRIM68Q6AZZ1 485 aa9.04□□□□□ -0.96
HDAC3-202ENST00000459727 TWF2Q6IBS0 349 aaKnown RBP9.04□□□□□ -0.96
HDAC3-202ENST00000459727 DCLRE1AQ6PJP8 1040 aa9.04□□□□□ -0.96
HDAC3-202ENST00000459727 C16orf89Q6UX73 402 aa9.04□□□□□ -0.96
HDAC3-202ENST00000459727 CLEC20AQ6ZU45 233 aa9.04□□□□□ -0.96
HDAC3-202ENST00000459727 TLK2Q86UE8 772 aa9.04□□□□□ -0.96
HDAC3-202ENST00000459727 FAM35AQ86V20 835 aa9.04□□□□□ -0.96
HDAC3-202ENST00000459727 METTL23Q86XA0 190 aa9.04□□□□□ -0.96
HDAC3-202ENST00000459727 MYLK4Q86YV6 388 aaPredicted RBP9.04□□□□□ -0.96
HDAC3-202ENST00000459727 TMEM126BQ8IUX1 230 aa9.04□□□□□ -0.96
HDAC3-202ENST00000459727 ARHGAP18Q8N392 663 aa9.04□□□□□ -0.96
HDAC3-202ENST00000459727 TTC8Q8TAM2 541 aa9.04□□□□□ -0.96
HDAC3-202ENST00000459727 SLC7A14Q8TBB6 771 aa9.04□□□□□ -0.96
HDAC3-202ENST00000459727 KCNV2Q8TDN2 545 aa9.04□□□□□ -0.96
HDAC3-202ENST00000459727 ACTRT2Q8TDY3 377 aa9.04□□□□□ -0.96
HDAC3-202ENST00000459727 CLEC4CQ8WTT0 213 aa9.04□□□□□ -0.96
HDAC3-202ENST00000459727 ZNF669Q96BR6 464 aaPredicted RBP9.04□□□□□ -0.96
HDAC3-202ENST00000459727 CCDC126Q96EE4 140 aa9.04□□□□□ -0.96
HDAC3-202ENST00000459727 FAR2Q96K12 515 aa9.04□□□□□ -0.96
HDAC3-202ENST00000459727 PPP1R10Q96QC0 940 aaKnown RBP9.04□□□□□ -0.96
HDAC3-202ENST00000459727 SYT15Q9BQS2 421 aa9.04□□□□□ -0.96
HDAC3-202ENST00000459727 APOL6Q9BWW8 343 aa9.04□□□□□ -0.96
HDAC3-202ENST00000459727 PRKD2Q9BZL6 878 aa9.04□□□□□ -0.96
HDAC3-202ENST00000459727 FAM192AQ9GZU8 254 aa9.04□□□□□ -0.96
HDAC3-202ENST00000459727 ILKAPQ9H0C8 392 aaPredicted RBP9.04□□□□□ -0.96
HDAC3-202ENST00000459727 RAB6CQ9H0N0 254 aa9.04□□□□□ -0.96
HDAC3-202ENST00000459727 OSBPL2Q9H1P3 480 aa9.04□□□□□ -0.96
HDAC3-202ENST00000459727 C12orf65Q9H3J6 166 aaKnown RBP9.04□□□□□ -0.96
HDAC3-202ENST00000459727 R3HDMLQ9H3Y0 253 aa9.04□□□□□ -0.96
HDAC3-202ENST00000459727 SYBUQ9NX95 663 aa9.04□□□□□ -0.96
HDAC3-202ENST00000459727 PDP2Q9P2J9 529 aa9.04□□□□□ -0.96
HDAC3-202ENST00000459727 EMCNQ9ULC0 261 aa9.04□□□□□ -0.96
HDAC3-202ENST00000459727 SUFUQ9UMX1 484 aa9.04□□□□□ -0.96
HDAC3-202ENST00000459727 ARHGAP26Q9UNA1 814 aa9.04□□□□□ -0.96
HDAC3-202ENST00000459727 PLA2G4CQ9UP65 541 aa9.04□□□□□ -0.96
HDAC3-202ENST00000459727 GIT1Q9Y2X7 761 aa9.04□□□□□ -0.96
HDAC3-202ENST00000459727 PDCD11Q14690 1871 aaKnown RBP9.03□□□□□ -0.96
HDAC3-202ENST00000459727 A0A096LPK6 155 aa9.03□□□□□ -0.96
HDAC3-202ENST00000459727 BTBD19C9JJ37 291 aa9.03□□□□□ -0.96
HDAC3-202ENST00000459727 SPTLC1O15269 473 aa9.03□□□□□ -0.96
HDAC3-202ENST00000459727 DYNC1LI2O43237 492 aaPredicted RBP9.03□□□□□ -0.96
HDAC3-202ENST00000459727 UGT1A9O60656 530 aa9.03□□□□□ -0.96
HDAC3-202ENST00000459727 SIN3BO75182 1162 aa9.03□□□□□ -0.96
HDAC3-202ENST00000459727 AP1G2O75843 785 aa9.03□□□□□ -0.96
HDAC3-202ENST00000459727 KRT36O76013 467 aa9.03□□□□□ -0.96
HDAC3-202ENST00000459727 MAP3K6O95382 1288 aa9.03□□□□□ -0.96
HDAC3-202ENST00000459727 THP07101 528 aa9.03□□□□□ -0.96
HDAC3-202ENST00000459727 ANPEPP15144 967 aa9.03□□□□□ -0.96
HDAC3-202ENST00000459727 CYP2B6P20813 491 aa9.03□□□□□ -0.96
HDAC3-202ENST00000459727 AKAP5P24588 427 aa9.03□□□□□ -0.96
HDAC3-202ENST00000459727 CCNCP24863 283 aa9.03□□□□□ -0.96
HDAC3-202ENST00000459727 LMO2P25791 158 aa9.03□□□□□ -0.96
HDAC3-202ENST00000459727 CRABP2P29373 138 aa9.03□□□□□ -0.96
HDAC3-202ENST00000459727 TKTP29401 623 aaKnown RBP9.03□□□□□ -0.96
HDAC3-202ENST00000459727 HOXC8P31273 242 aa9.03□□□□□ -0.96
HDAC3-202ENST00000459727 GJA5P36382 358 aa9.03□□□□□ -0.96
HDAC3-202ENST00000459727 CXCR3P49682 368 aa9.03□□□□□ -0.96
HDAC3-202ENST00000459727 GEMP55040 296 aa9.03□□□□□ -0.96
HDAC3-202ENST00000459727 BTKQ06187 659 aa9.03□□□□□ -0.96
HDAC3-202ENST00000459727 PRKAA1Q13131 559 aa9.03□□□□□ -0.96
HDAC3-202ENST00000459727 MAP2K5Q13163 448 aa9.03□□□□□ -0.96
HDAC3-202ENST00000459727 NME3Q13232 169 aa9.03□□□□□ -0.96
HDAC3-202ENST00000459727 ANKRD20A4Q4UJ75 823 aa9.03□□□□□ -0.96
HDAC3-202ENST00000459727 MDH1BQ5I0G3 518 aa9.03□□□□□ -0.96
HDAC3-202ENST00000459727 RABGAP1LQ5R372 815 aa9.03□□□□□ -0.96
HDAC3-202ENST00000459727 OTUD1Q5VV17 481 aaPredicted RBP9.03□□□□□ -0.96
HDAC3-202ENST00000459727 OLFML2BQ68BL8 750 aa9.03□□□□□ -0.96
HDAC3-202ENST00000459727 KCTD11Q693B1 232 aa9.03□□□□□ -0.96
HDAC3-202ENST00000459727 ZFP1Q6P2D0 407 aa9.03□□□□□ -0.96
HDAC3-202ENST00000459727 RFWD3Q6PCD5 774 aa9.03□□□□□ -0.96
HDAC3-202ENST00000459727 POTEHQ6S545 545 aa9.03□□□□□ -0.96
HDAC3-202ENST00000459727 RIPOR1Q6ZS17 1223 aa9.03□□□□□ -0.96
HDAC3-202ENST00000459727 KIAA0408Q6ZU52 694 aa9.03□□□□□ -0.96
HDAC3-202ENST00000459727 ACAD11Q709F0 780 aa9.03□□□□□ -0.96
HDAC3-202ENST00000459727 STRA8Q7Z7C7 330 aa9.03□□□□□ -0.96
HDAC3-202ENST00000459727 TTC7BQ86TV6 843 aa9.03□□□□□ -0.96
HDAC3-202ENST00000459727 KCNMB4Q86W47 210 aa9.03□□□□□ -0.96
HDAC3-202ENST00000459727 PLCD3Q8N3E9 789 aa9.03□□□□□ -0.96
HDAC3-202ENST00000459727 DCLK2Q8N568 766 aa9.03□□□□□ -0.96
HDAC3-202ENST00000459727 CATSPER1Q8NEC5 780 aa9.03□□□□□ -0.96
HDAC3-202ENST00000459727 OR6Y1Q8NGX8 325 aa9.03□□□□□ -0.96
HDAC3-202ENST00000459727 URGCPQ8TCY9 931 aa9.03□□□□□ -0.96
HDAC3-202ENST00000459727 PDCD6IPQ8WUM4 868 aaKnown RBP9.03□□□□□ -0.96
HDAC3-202ENST00000459727 DNAJB3Q8WWF6 145 aa9.03□□□□□ -0.96
Retrieved 100 of 20,778 RNA–protein pairs in 19.1 ms